
./remove_root.pl org_core_seq_gap_80.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_80.reroot.order.noroot.tre > org_core_seq_gap_80.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_80_fasttree_jttcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_80_fasttree_jttcat.reroot.order.noroot.tre > org_core_seq_gap_80_fasttree_jttcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_80_fasttree_wagcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_80_fasttree_wagcat.reroot.order.noroot.tre > org_core_seq_gap_80_fasttree_wagcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_80_fasttree_lgcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_80_fasttree_lgcat.reroot.order.noroot.tre > org_core_seq_gap_80_fasttree_lgcat.reroot.order.noroot.svg


./remove_root.pl org_core_seq_gap_75.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_75.reroot.order.noroot.tre > org_core_seq_gap_75.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_75_fasttree_jttcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_75_fasttree_jttcat.reroot.order.noroot.tre > org_core_seq_gap_75_fasttree_jttcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_75_fasttree_wagcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_75_fasttree_wagcat.reroot.order.noroot.tre > org_core_seq_gap_75_fasttree_wagcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_75_fasttree_lgcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_75_fasttree_lgcat.reroot.order.noroot.tre > org_core_seq_gap_75_fasttree_lgcat.reroot.order.noroot.svg


./remove_root.pl org_core_seq_gap_70.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_70.reroot.order.noroot.tre > org_core_seq_gap_70.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_70_fasttree_jttcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_70_fasttree_jttcat.reroot.order.noroot.tre > org_core_seq_gap_70_fasttree_jttcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_70_fasttree_wagcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_70_fasttree_wagcat.reroot.order.noroot.tre > org_core_seq_gap_70_fasttree_wagcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_70_fasttree_lgcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_70_fasttree_lgcat.reroot.order.noroot.tre > org_core_seq_gap_70_fasttree_lgcat.reroot.order.noroot.svg


./remove_root.pl org_core_seq_gap_65.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_65.reroot.order.noroot.tre > org_core_seq_gap_65.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_65_fasttree_jttcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_65_fasttree_jttcat.reroot.order.noroot.tre > org_core_seq_gap_65_fasttree_jttcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_65_fasttree_wagcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_65_fasttree_wagcat.reroot.order.noroot.tre > org_core_seq_gap_65_fasttree_wagcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_65_fasttree_lgcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_65_fasttree_lgcat.reroot.order.noroot.tre > org_core_seq_gap_65_fasttree_lgcat.reroot.order.noroot.svg


./remove_root.pl org_core_seq_gap_60.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_60.reroot.order.noroot.tre > org_core_seq_gap_60.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_60_fasttree_jttcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_60_fasttree_jttcat.reroot.order.noroot.tre > org_core_seq_gap_60_fasttree_jttcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_60_fasttree_wagcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_60_fasttree_wagcat.reroot.order.noroot.tre > org_core_seq_gap_60_fasttree_wagcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_60_fasttree_lgcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_60_fasttree_lgcat.reroot.order.noroot.tre > org_core_seq_gap_60_fasttree_lgcat.reroot.order.noroot.svg


./remove_root.pl org_core_seq_gap_55.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_55.reroot.order.noroot.tre > org_core_seq_gap_55.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_55_fasttree_jttcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_55_fasttree_jttcat.reroot.order.noroot.tre > org_core_seq_gap_55_fasttree_jttcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_55_fasttree_wagcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_55_fasttree_wagcat.reroot.order.noroot.tre > org_core_seq_gap_55_fasttree_wagcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_55_fasttree_lgcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_55_fasttree_lgcat.reroot.order.noroot.tre > org_core_seq_gap_55_fasttree_lgcat.reroot.order.noroot.svg


./remove_root.pl org_core_seq_gap_50.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_50.reroot.order.noroot.tre > org_core_seq_gap_50.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_50_fasttree_jttcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_50_fasttree_jttcat.reroot.order.noroot.tre > org_core_seq_gap_50_fasttree_jttcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_50_fasttree_wagcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_50_fasttree_wagcat.reroot.order.noroot.tre > org_core_seq_gap_50_fasttree_wagcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_50_fasttree_lgcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_50_fasttree_lgcat.reroot.order.noroot.tre > org_core_seq_gap_50_fasttree_lgcat.reroot.order.noroot.svg


./remove_root.pl org_core_seq_gap_0.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_0.reroot.order.noroot.tre > org_core_seq_gap_0.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_0_fasttree_jttcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_0_fasttree_jttcat.reroot.order.noroot.tre > org_core_seq_gap_0_fasttree_jttcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_0_fasttree_wagcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_0_fasttree_wagcat.reroot.order.noroot.tre > org_core_seq_gap_0_fasttree_wagcat.reroot.order.noroot.svg

./remove_root.pl org_core_seq_gap_0_fasttree_lgcat.reroot.order.tre
nw_display -s -v 20 -l 'font-weight:bold'  -b 'visibility:hidden' -i 'font-size:small;fill:blue' -w 800 -W 20 org_core_seq_gap_0_fasttree_lgcat.reroot.order.noroot.tre > org_core_seq_gap_0_fasttree_lgcat.reroot.order.noroot.svg

