HOMD ::family::Micrococcaceae

Family: Micrococcaceae

Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae
Lower rank member(s): [Genus:Kocuria] [Genus:Micrococcus] [Genus:Rothia]

LINKS: Ecology Home | Life Page: Micrococcaceae

Oral:	SUBP-- Subgingival Plaque	SUPP -- Supragingival Plaque	PERIO -- Periodontal	AKE -- Attached Keratinized Gingiva	BMU -- Buccal Mucosa
Oral:	HPA -- Hard Palate	SAL -- Saliva	THR -- Throat	PTO -- Palatine Tonsils	TDO -- Tongue Dorsum
Nasal:	ANA -- Anterior Nares
Skin:	LRC -- L_Retroauricular Crease	RRC -- R_Retroauricular Crease	LAF -- L_Antecubital Fossa	RAF -- R_Antecubital Fossa
Vaginal:	VIN -- Vaginal Introitus	MVA -- Mid Vagina	PFO -- Posterior Fornix
Gut:	STO -- Stool

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	5.808	8.240	0.882	5.297	4.560	2.033	1.857	1.515	4.098	0.221	0.156	0.164	1.118	1.029	0.000	0.000	0.000	0.000
10^thp	0.354	1.026	0.001	0.466	0.512	0.037	0.136	0.087	0.232	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	13.636	17.695	2.927	13.902	9.135	4.453	4.320	3.782	10.543	0.446	0.335	0.279	3.343	2.617	0.000	0.000	0.000	0.000
Stdev	5.990	8.783	1.780	7.032	5.085	3.116	2.147	2.063	5.051	0.621	0.516	1.026	1.941	1.807	0.000	0.000	0.000	0.000
Prev(%)	95.364	96.026	89.510	96.575	97.315	90.769	96.726	94.000	96.129	70.000	62.069	56.091	80.460	78.802	0.000	0.000	0.000	0.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	3.260	5.262	0.992	4.162	3.593	1.330	1.367	1.077	2.888	0.181	0.367	0.311	0.674	0.887	0.000	0.000	0.000	0.000
10^thp	0.255	0.658	0.000	0.248	0.431	0.104	0.044	0.055	0.196	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	8.335	12.198	2.391	11.459	8.961	2.846	3.240	2.795	6.897	0.429	0.519	0.359	1.005	1.648	0.000	0.000	0.000	0.000
Stdev	4.449	6.134	2.924	6.108	3.968	2.017	2.099	1.762	4.227	0.481	1.725	1.395	2.287	2.274	0.000	0.000	0.000	0.000
Prev(%)	98.765	100.000	73.086	98.511	99.233	97.917	93.458	95.620	98.783	60.536	44.586	40.432	60.000	76.667	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	5.299	3.360	0.774	4.511	3.882	3.054	1.047	0.851	1.610	0.006
10^thp	0.084	0.229	0.033	0.450	0.472	0.266	0.105	0.073	0.060	0.000
90^thp	15.756	6.517	1.880	11.586	8.588	7.778	2.538	1.631	4.243	0.023
Stdev	8.122	5.920	1.525	5.502	5.597	3.255	1.018	1.339	2.139	0.011
Prev(%)	100.000	100.000	100.000	100.000	100.000	100.000	100.000	96.774	100.000	25.000

HMP Metaphlan (not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.839	2.733	0.429	0.351	3.821	9.560	1.151	0.671	0.925	4.900	0.139	0.036	0.053	3.140	0.014	0.066	0.051	0.009
10^thp	0.240	0.175	0.000	0.000	0.095	9.560	0.125	0.030	0.096	0.635	0.000	0.000	0.000	3.140	0.000	0.000	0.000	0.000
90^thp	4.768	6.685	1.208	0.924	10.790	9.560	2.660	1.580	2.556	11.230	0.128	0.105	0.039	3.140	0.000	0.000	0.000	0.000
Stdev	2.507	3.556	0.870	0.547	5.836	0.000	1.209	0.751	0.952	5.829	0.731	0.062	0.242	0.000	0.045	0.249	0.560	0.179
Prev(%)	95.833	97.475	54.167	64.706	96.011	100.000	100.000	87.500	92.000	99.531	18.468	58.333	25.000	100.000	9.091	7.143	6.566	1.273

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	7.393	9.851	0.728	3.852	4.010	2.330	2.669	1.921	4.931	0.003
10^thp	0.607	1.133	0.000	0.245	0.762	0.171	0.150	0.141	0.690	0.000
90^thp	16.361	23.471	2.243	9.064	7.493	5.345	7.068	5.114	12.978	0.000
Stdev	8.225	9.343	1.410	5.178	3.722	3.514	2.884	2.384	5.086	0.010
Prev(%)	96.104	97.403	80.519	98.701	98.701	96.104	94.805	97.403	100.000	7.792

Eren V3-V5 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	2.299	3.708	0.195	1.203	1.162	0.680	0.516	0.460	1.331	0.001
10^thp	0.070	0.304	0.000	0.026	0.028	0.053	0.000	0.000	0.000	0.000
90^thp	5.377	8.649	0.368	2.862	2.875	1.684	1.335	1.034	3.535	0.000
Stdev	3.818	5.368	0.680	2.365	1.608	0.964	0.717	0.707	2.087	0.003
Prev(%)	93.919	98.649	50.676	91.216	93.243	94.595	82.432	81.081	83.784	2.797

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