Species: Haemophilus haemolyticus
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BM - Buccal Mucosa
KG - Keratinized Gingiva
HP - Hard Palate
TD - Tongue Dorsum
PT - Palatine Tonsils
TH - Throat
SV - Saliva
SupP - Supra-gingival Plaque
SubP - Sub-gingival Plaque
NS - Nasal
ST - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.014 | 0.007 | 0.558 | 0.259 | 0.069 | 0.068 | 0.116 | 0.099 | 0.006 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.010 | 0.027 | 1.478 | 0.867 | 0.146 | 0.138 | 0.104 | 0.094 | 0.000 | 0.000 |
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Stdev | 0.088 | 0.021 | 1.297 | 0.591 | 0.300 | 0.215 | 0.546 | 0.574 | 0.024 | 0.000 |
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Prev | 10.390 | 14.286 | 58.442 | 59.740 | 29.870 | 32.468 | 35.065 | 29.870 | 9.091 | 0.000 |
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Notes:
Reads equally close to H. haemolyticus and H. sp. HMT 908 were assigned half to each taxon.
Reads equally close to H. haemolyticus, H. sp. HMT 908, and Aggregatibacter sp. HMT 898 were assigned one-third to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.092 | 0.106 | 3.534 | 1.427 | 0.334 | 0.391 | 0.260 | 0.332 | 0.021 | 0.000 |
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10thp | 0.000 | 0.000 | 0.173 | 0.033 | 0.000 | 0.010 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.205 | 0.220 | 10.109 | 3.877 | 0.721 | 1.004 | 0.651 | 0.620 | 0.051 | 0.000 |
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Stdev | 0.260 | 0.330 | 4.592 | 2.094 | 0.582 | 0.463 | 0.705 | 0.928 | 0.043 | 0.000 |
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Prev | 61.486 | 57.432 | 95.946 | 93.243 | 87.162 | 89.865 | 76.351 | 81.757 | 45.946 | 0.699 |
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From: Dewhirst 35x9 data (not published yet)
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Notes:
Reads equally close to HMT 036 and 851 were assigned half to each taxon.
Reads equally close to HMT 259 and 851 were assigned half to each taxon.
Reads equally close to HMT 036, 851, and 908 were assigned one-third to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | NS |
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Avg | 0.016 | 0.046 | 1.639 | 0.237 | 0.063 | 0.028 | 0.042 | 0.074 | 0.235 | 0.001 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.038 | 0.019 | 3.490 | 0.415 | 0.124 | 0.088 | 0.045 | 0.157 | 0.212 | 0.000 |
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Stdev | 0.056 | 0.216 | 4.504 | 0.614 | 0.104 | 0.067 | 0.140 | 0.182 | 1.052 | 0.003 |
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Prev | 65.714 | 44.118 | 94.444 | 76.471 | 78.571 | 47.222 | 57.576 | 45.161 | 35.294 | 5.000 |
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