HOMD ::species::Haemophilus sp._HMT

Species: Haemophilus sp._HMT_036

Download Options

Full Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus sp._HMT_036

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.016	0.011	1.306	0.334	0.082	0.085	0.026	0.022	0.004	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.047	0.024	4.193	0.805	0.246	0.216	0.094	0.063	0.000	0.000
Stdev	0.047	0.044	2.406	0.713	0.179	0.217	0.057	0.052	0.016	0.000
Prev	20.779	19.481	80.519	76.623	55.844	48.052	29.870	35.065	7.792	0.000

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.033	0.030	1.469	0.605	0.138	0.190	0.117	0.177	0.012	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.068	0.039	3.669	1.619	0.334	0.418	0.163	0.579	0.044	0.000
Stdev	0.127	0.135	4.588	1.513	0.466	0.540	0.612	0.519	0.034	0.000
Prev	19.595	16.892	50.676	50.000	31.081	48.649	38.514	33.108	19.595	0.000

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 036 and 851 were assigned half to each taxon.

Reads equally close to HMT 036, 851, and 908 were assigned one-third to each taxon.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.054	0.030	2.418	0.570	0.258	0.012	0.063	0.048	0.082	0.005
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.028	0.084	6.419	0.842	0.536	0.053	0.125	0.200	0.156	0.000
Stdev	0.232	0.076	5.664	1.968	0.711	0.022	0.187	0.100	0.247	0.021
Prev	68.571	41.176	88.889	85.294	75.000	55.556	78.788	51.613	41.176	5.000

Copyright 2007-2021 The Forsyth Institute

Hosted on Amazon AWS EC2