HOMD ::species::Leptotrichia wadei

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Leptotrichia wadei

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Full Lineage: Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Leptotrichiaceae; Leptotrichia; Leptotrichia wadei

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to L. wadei and L. sp. HMT 417 were assigned half to each taxon

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.387	0.286	0.077	0.072	0.104	0.073	0.571	0.399	0.294	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.785	0.888	0.025	0.213	0.383	0.216	2.010	1.226	0.852	0.000
Stdev	1.329	0.833	0.507	0.146	0.176	0.148	0.883	0.622	0.555	0.000
Prev	50.649	50.649	23.377	51.948	72.727	57.143	88.312	81.818	76.623	0.000

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.357	0.462	0.034	0.077	0.092	0.083	0.272	0.227	0.152	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.577	1.352	0.021	0.230	0.211	0.210	0.624	0.727	0.253	0.000
Stdev	1.451	1.211	0.231	0.179	0.274	0.208	0.763	0.554	0.516	0.001
Prev	44.595	51.351	12.162	45.270	39.865	40.541	55.405	58.108	50.000	0.699

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 222 and 417 were assigned half to each taxon.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.850	2.563	0.098	0.358	0.165	0.028	0.086	0.048	0.045	0.003
10^thp	0.000	0.002	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.270	8.028	0.205	1.042	0.149	0.062	0.287	0.088	0.078	0.000
Stdev	2.884	5.318	0.255	0.938	0.658	0.066	0.182	0.150	0.092	0.011
Prev	91.429	91.176	75.000	85.294	85.714	80.556	87.879	58.065	76.471	5.000