HOMD ::species::Streptococcus sanguinis

Species: Streptococcus sanguinis

Download Options

Full Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sanguinis

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	3.172	4.048	0.778	0.912	0.494	0.585	0.252	0.212	0.271	0.002
10^thp	0.394	0.656	0.042	0.141	0.088	0.040	0.000	0.000	0.000	0.000
90^thp	7.025	7.776	2.117	2.283	1.262	1.343	0.620	0.636	0.791	0.000
Stdev	3.898	4.194	1.330	1.159	0.589	0.572	0.387	0.320	0.769	0.007
Prev	100.000	100.000	98.701	98.701	98.701	89.610	88.312	83.117	61.039	5.195

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to S. sanguinis and S. agalactiae were assigned to S. sanguinis.

Reads equally close to S. agalactiae, S. infantis clade 638, S. oralis subsp. dentisani clade 058, S. pyogenes, S. sanguinis, and S. sp. HMT 061 and 074 were assigned one-fifth each to S. infantis clade 638, S. oralis subsp. dentisani clade 058, S. sanguinis, and S. sp. HMT 061 and 074.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	3.072	4.670	0.568	1.020	0.495	0.772	0.255	0.201	0.099	0.001
10^thp	0.206	0.785	0.000	0.085	0.049	0.125	0.000	0.000	0.000	0.000
90^thp	6.238	9.009	1.264	2.218	1.097	1.530	0.746	0.379	0.203	0.000
Stdev	4.457	4.924	1.621	1.716	0.762	0.917	0.417	0.586	0.230	0.007
Prev	96.622	100.000	87.162	97.973	96.622	97.297	83.108	84.459	86.486	4.196

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	2.005	3.515	1.524	1.209	0.733	0.456	0.159	0.122	0.298	0.011
10^thp	0.047	0.343	0.014	0.135	0.129	0.086	0.025	0.014	0.020	0.000
90^thp	3.889	7.476	2.371	2.569	1.559	1.042	0.384	0.347	0.446	0.049
Stdev	4.749	3.427	3.893	1.019	0.649	0.567	0.178	0.138	0.762	0.029
Prev	100.000	100.000	100.000	100.000	100.000	100.000	96.970	100.000	97.059	15.000

Copyright 2007-2021 The Forsyth Institute

Hosted on Amazon AWS EC2