Species: Treponema sp._HMT_257
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BM - Buccal Mucosa
KG - Keratinized Gingiva
HP - Hard Palate
TD - Tongue Dorsum
PT - Palatine Tonsils
TH - Throat
SV - Saliva
SupP - Supra-gingival Plaque
SubP - Sub-gingival Plaque
NS - Nasal
ST - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.019 | 0.001 | 0.000 | 0.001 | 0.002 | 0.017 | 0.000 | 0.004 | 0.002 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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Stdev | 0.095 | 0.007 | 0.000 | 0.004 | 0.011 | 0.072 | 0.001 | 0.020 | 0.012 | 0.000 |
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Prev | 7.792 | 3.896 | 0.000 | 2.597 | 2.597 | 7.792 | 1.299 | 7.792 | 2.597 | 0.000 |
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Notes:
Reads equally close to T. amylovorum and T. sp. HMT 257 were assigned half to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.049 | 0.013 | 0.000 | 0.004 | 0.002 | 0.035 | 0.006 | 0.019 | 0.002 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.095 | 0.000 | 0.000 | 0.009 | 0.000 | 0.057 | 0.006 | 0.023 | 0.000 | 0.000 |
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Stdev | 0.201 | 0.064 | 0.001 | 0.015 | 0.014 | 0.155 | 0.046 | 0.081 | 0.018 | 0.000 |
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Prev | 20.946 | 9.459 | 0.676 | 11.486 | 4.730 | 24.324 | 11.486 | 14.865 | 3.378 | 0.000 |
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From: Dewhirst 35x9 data (not published yet)
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | NS |
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Avg | 0.171 | 0.001 | 0.001 | 0.009 | 0.002 | 0.000 | 0.002 | 0.020 | 0.000 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.002 | 0.000 | 0.002 | 0.004 | 0.000 | 0.000 |
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Stdev | 1.458 | 0.006 | 0.003 | 0.039 | 0.009 | 0.001 | 0.007 | 0.096 | 0.001 | 0.000 |
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Prev | 11.429 | 8.824 | 8.333 | 8.824 | 10.714 | 5.556 | 12.121 | 12.903 | 5.882 | 0.000 |
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