Genome Explorer: Ralstonia pickettii 101480035-1 (SEQF10187.1)
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NCBI Annotation for SEQF10187.1
| Genome selected: Ralstonia pickettii 101480035-1 | |||
| Contigs: | 42 | Bases: | 5539325 bps |
| CDS: | 126 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 47 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5001 | QGCO01000025.1 | MBX4113970.1 | open | 306 [NA] | 101 [AA] | 31135-31440 | DEE38_25800 | hypothetical protein |
| 5002 | QGCO01000025.1 | MBX4113971.1 | open | 1269 [NA] | 422 [AA] | 31433-32701 | DEE38_25805 | MFS transporter |
| 5003 | QGCO01000025.1 | MBX4113972.1 | open | 936 [NA] | 311 [AA] | 32745-33680 | DEE38_25810 | DUF1259 domain-containing protein |
| 5004 | QGCO01000025.1 | MBX4113973.1 | open | 1041 [NA] | 346 [AA] | 33740-34780 | DEE38_25815 | YncE family protein |
| 5005 | QGCO01000025.1 | MBX4113974.1 | open | 1059 [NA] | 352 [AA] | 34835-35893 | DEE38_25820 | DMT family transporter |
| 5006 | QGCO01000025.1 | MBX4113975.1 | open | 1299 [NA] | 432 [AA] | 35900-37198 | DEE38_25825 | site-specific integrase |
| 5007 | QGCO01000025.1 | MBX4113976.1 | open | 2928 [NA] | 975 [AA] | 37224-40151 | DEE38_25830 | Tn3 family transposase |
| 5008 | QGCO01000025.1 | MBX4113977.1 | open | 1023 [NA] | 340 [AA] | 40272-41294 | DEE38_25835 | phosphoadenosine phosphosulfate reductase family protein |
| 5009 | QGCO01000025.1 | MBX4113978.1 | open | 270 [NA] | 89 [AA] | 41309-41578 | DEE38_25840 | hypothetical protein |
| 5010 | QGCO01000025.1 | MBX4113979.1 | open | 405 [NA] | 134 [AA] | 41688-42092 | DEE38_25845 | hypothetical protein |
| 5011 | QGCO01000025.1 | MBX4113980.1 | open | 606 [NA] | 201 [AA] | 42168-42773 | DEE38_25850 | hypothetical protein |
| 5012 | QGCO01000025.1 | MBX4113981.1 | open | 327 [NA] | 108 [AA] | 42889-43215 | DEE38_25855 | transposase |
| 5013 | QGCO01000025.1 | MBX4113982.1 | open | 426 [NA] | 141 [AA] | 43212-43637 | DEE38_25860 | IS3 family transposase |
| 5014 | QGCO01000026.1 | MBX4113983.1 | open | 693 [NA] | 230 [AA] | <1-695 | DEE38_25865 | S-methyl-5'-thioadenosine phosphorylase |
| 5015 | QGCO01000026.1 | MBX4113984.1 | open | 909 [NA] | 302 [AA] | 897-1805 | DEE38_25870 | LysR family transcriptional regulator |
| 5016 | QGCO01000026.1 | MBX4113985.1 | open | 774 [NA] | 257 [AA] | 2061-2834 | DEE38_25875 | tRNA (guanosine(46)-N7)-methyltransferase TrmB |
| 5017 | QGCO01000026.1 | MBX4113986.1 | open | 1113 [NA] | 370 [AA] | 2860-3972 | DEE38_25880 | NADH:flavin oxidoreductase/NADH oxidase |
| 5018 | QGCO01000026.1 | MBX4113987.1 | open | 882 [NA] | 293 [AA] | 4092-4973 | DEE38_25885 | undecaprenyl-diphosphate phosphatase |
| 5019 | QGCO01000026.1 | MBX4113988.1 | open | 594 [NA] | 197 [AA] | 5026-5619 | DEE38_25890 | DUF1439 domain-containing protein |
| 5020 | QGCO01000026.1 | MBX4113989.1 | open | 258 [NA] | 85 [AA] | 5626-5883 | DEE38_25895 | YkgJ family cysteine cluster protein |
| 5021 | QGCO01000026.1 | MBX4113990.1 | open | 744 [NA] | 247 [AA] | 6065-6808 | DEE38_25900 | TetR/AcrR family transcriptional regulator |
| 5022 | QGCO01000026.1 | MBX4113991.1 | open | 651 [NA] | 216 [AA] | 6904-7554 | DEE38_25905 | protein-L-isoaspartate O-methyltransferase |
| 5023 | QGCO01000026.1 | MBX4113992.1 | open | 333 [NA] | 110 [AA] | 7577-7909 | DEE38_25910 | sulfurtransferase |
| 5024 | QGCO01000026.1 | MBX4113993.1 | open | 1437 [NA] | 478 [AA] | 8055-9491 | DEE38_25915 | TolC family outer membrane protein |
| 5025 | QGCO01000026.1 | MBX4113994.1 | open | 681 [NA] | 226 [AA] | 9492-10172 | DEE38_25920 | META domain-containing protein |
| 5026 | QGCO01000026.1 | MBX4113995.1 | open | 1317 [NA] | 438 [AA] | 10274-11590 | DEE38_25925 | lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase |
| 5027 | QGCO01000026.1 | MBX4113996.1 | open | 999 [NA] | 332 [AA] | 11590-12588 | DEE38_25930 | lipopolysaccharide heptosyltransferase I |
| 5028 | QGCO01000026.1 | MBX4113997.1 | open | 1389 [NA] | 462 [AA] | 12632-14020 | DEE38_25935 | phosphomannomutase/phosphoglucomutase |
| 5029 | QGCO01000026.1 | MBX4113998.1 | open | 1062 [NA] | 353 [AA] | 14197-15258 | DEE38_25940 | dTDP-glucose 4,6-dehydratase |
| 5030 | QGCO01000026.1 | MBX4113999.1 | open | 885 [NA] | 294 [AA] | 15274-16158 | DEE38_25945 | glucose-1-phosphate thymidylyltransferase RfbA |
| 5031 | QGCO01000026.1 | MBX4114000.1 | open | 555 [NA] | 184 [AA] | 16155-16709 | DEE38_25950 | dTDP-4-dehydrorhamnose 3,5-epimerase |
| 5032 | QGCO01000026.1 | MBX4114001.1 | open | 939 [NA] | 312 [AA] | 16706-17644 | DEE38_25955 | dTDP-4-dehydrorhamnose reductase |
| 5033 | QGCO01000026.1 | MBX4114002.1 | open | 987 [NA] | 328 [AA] | 17610-18596 | DEE38_25960 | GNAT family N-acetyltransferase |
| 5034 | QGCO01000026.1 | MBX4114003.1 | open | 1140 [NA] | 379 [AA] | 18593-19732 | DEE38_25965 | DegT/DnrJ/EryC1/StrS family aminotransferase |
| 5035 | QGCO01000026.1 | MBX4114004.1 | open | 1452 [NA] | 483 [AA] | 19738-21189 | DEE38_25970 | hypothetical protein |
| 5036 | QGCO01000026.1 | MBX4114005.1 | open | 993 [NA] | 330 [AA] | 21186-22178 | DEE38_25975 | glycosyltransferase |
| 5037 | QGCO01000026.1 | MBX4114006.1 | open | 1260 [NA] | 419 [AA] | 22185-23444 | DEE38_25980 | hypothetical protein |
| 5038 | QGCO01000026.1 | MBX4114007.1 | open | 1140 [NA] | 379 [AA] | 23475-24614 | DEE38_25985 | NAD-dependent epimerase/dehydratase family protein |
| 5039 | QGCO01000026.1 | MBX4114008.1 | open | 549 [NA] | 182 [AA] | 24618-25166 | DEE38_25990 | serine acetyltransferase |
| 5040 | QGCO01000026.1 | MBX4114009.1 | open | 1068 [NA] | 355 [AA] | 25163-26230 | DEE38_25995 | hypothetical protein |
| 5041 | QGCO01000026.1 | MBX4114010.1 | open | 1104 [NA] | 367 [AA] | 26224-27327 | DEE38_26000 | glycosyltransferase |
| 5042 | QGCO01000026.1 | MBX4114011.1 | open | 876 [NA] | 291 [AA] | 27320-28195 | DEE38_26005 | chain-length determining protein |
| 5043 | QGCO01000026.1 | MBX4114012.1 | open | 834 [NA] | 277 [AA] | 28209-29042 | DEE38_26010 | symmetrical bis(5'-nucleosyl)-tetraphosphatase |
| 5044 | QGCO01000026.1 | MBX4114013.1 | open | 513 [NA] | 170 [AA] | 29169->29681 | DEE38_26015 | hypothetical protein |
| 5045 | QGCO01000027.1 | MBX4114014.1 | open | 279 [NA] | 92 [AA] | 1221-1499 | DEE38_26025 | hypothetical protein |
| 5046 | QGCO01000027.1 | MBX4114015.1 | open | 402 [NA] | 133 [AA] | 1798-2199 | DEE38_26030 | copper-binding periplasmic protein CzcE |
| 5047 | QGCO01000027.1 | MBX4114016.1 | open | 1431 [NA] | 476 [AA] | 2308-3738 | DEE38_26035 | sensor histidine kinase CzcS |
| 5048 | QGCO01000027.1 | MBX4114017.1 | open | 678 [NA] | 225 [AA] | 3743-4420 | DEE38_26040 | heavy metal homeostasis two-component system response regulator CzcR |
| 5049 | QGCO01000027.1 | MBX4114018.1 | open | 951 [NA] | 316 [AA] | 4422-5372 | DEE38_26045 | cation diffusion facilitator family transporter |
| 5050 | QGCO01000027.1 | MBX4114019.1 | open | 3192 [NA] | 1063 [AA] | 5423-8614 | DEE38_26050 | heavy metal efflux RND transporter CzcA |
| 5051 | QGCO01000027.1 | MBX4114020.1 | open | 1563 [NA] | 520 [AA] | 8631-10193 | DEE38_26055 | heavy metal efflux RND transporter CzcB |
| 5052 | QGCO01000027.1 | MBX4114021.1 | open | 1257 [NA] | 418 [AA] | 10211-11467 | DEE38_26060 | heavy metal efflux RND transporter CzcC |
| 5053 | QGCO01000027.1 | MBX4114022.1 | open | 348 [NA] | 115 [AA] | 11543-11890 | DEE38_26065 | CDF family cobalt-zinc-cadmium transporter CzcI |
| 5054 | QGCO01000027.1 | MBX4114023.1 | open | 651 [NA] | 216 [AA] | 12205-12855 | DEE38_26070 | heavy metal efflux RND transporter CzcN |
| 5055 | QGCO01000027.1 | MBX4114024.1 | open | 459 [NA] | 152 [AA] | 13105-13563 | DEE38_26075 | MgtC/SapB family protein |
| 5056 | QGCO01000027.1 | MBX4114025.1 | open | 177 [NA] | 58 [AA] | 14166-14342 | DEE38_26080 | hypothetical protein |
| 5057 | QGCO01000027.1 | MBX4114026.1 | open | 939 [NA] | 312 [AA] | 14941-15879 | DEE38_26085 | DNA-binding protein |
| 5058 | QGCO01000027.1 | MBX4114027.1 | open | 1506 [NA] | 501 [AA] | 15876-17381 | DEE38_26090 | tyrosine-type recombinase/integrase |
| 5059 | QGCO01000027.1 | MBX4114028.1 | open | 255 [NA] | 84 [AA] | 17312-17566 | DEE38_26095 | DoxX family membrane protein |
| 5060 | QGCO01000027.1 | MBX4114029.1 | open | 1686 [NA] | 561 [AA] | 17595-19280 | DEE38_26100 | mercury(II) reductase |
| 5061 | QGCO01000027.1 | MBX4114030.1 | open | 420 [NA] | 139 [AA] | 19321-19740 | DEE38_26105 | organomercurial transporter MerC |
| 5062 | QGCO01000027.1 | MBX4114031.1 | open | 273 [NA] | 90 [AA] | 19769-20041 | DEE38_26110 | mercury resistance system periplasmic binding protein MerP |
| 5063 | QGCO01000027.1 | MBX4114032.1 | open | 351 [NA] | 116 [AA] | 20055-20405 | DEE38_26115 | mercuric ion transporter MerT |
| 5064 | QGCO01000027.1 | MBX4114033.1 | open | 408 [NA] | 135 [AA] | 20477-20884 | DEE38_26120 | Hg(II)-responsive transcriptional regulator |
| 5065 | QGCO01000027.1 | MBX4114034.1 | open | 2679 [NA] | 892 [AA] | 23232-25910 | DEE38_26130 | hypothetical protein |
| 5066 | QGCO01000027.1 | MBX4114035.1 | open | 996 [NA] | 331 [AA] | 25932-26927 | DEE38_26135 | SDR family oxidoreductase |
| 5067 | QGCO01000027.1 | MBX4114036.1 | open | 1815 [NA] | 604 [AA] | 26928-28742 | DEE38_26140 | glycoside hydrolase family 15 protein |
| 5068 | QGCO01000027.1 | MBX4114037.1 | open | 276 [NA] | 91 [AA] | 28940-29215 | DEE38_26145 | four-helix bundle copper-binding protein |
| 5069 | QGCO01000028.1 | MBX4114038.1 | open | 327 [NA] | 108 [AA] | 104-430 | DEE38_26150 | DUF4131 domain-containing protein |
| 5070 | QGCO01000028.1 | MBX4114039.1 | open | 630 [NA] | 209 [AA] | 923-1552 | DEE38_26155 | hypothetical protein |
| 5071 | QGCO01000028.1 | MBX4114040.1 | open | 3072 [NA] | 1023 [AA] | 1790-4861 | DEE38_26160 | type I restriction endonuclease subunit R |
| 5072 | QGCO01000028.1 | MBX4114041.1 | open | 1422 [NA] | 473 [AA] | 4848-6269 | DEE38_26165 | restriction endonuclease subunit S |
| 5073 | QGCO01000028.1 | MBX4114042.1 | open | 2385 [NA] | 794 [AA] | 6266-8650 | DEE38_26170 | type I restriction-modification system subunit M |
| 5074 | QGCO01000028.1 | MBX4114043.1 | open | 1731 [NA] | 576 [AA] | 8662-10392 | DEE38_26175 | DUF262 domain-containing HNH endonuclease family protein |
| 5075 | QGCO01000028.1 | MBX4114044.1 | open | 900 [NA] | 299 [AA] | 10408-11307 | DEE38_26180 | WYL domain-containing protein |
| 5076 | QGCO01000028.1 | MBX4114045.1 | open | 2205 [NA] | 734 [AA] | 11533-13737 | DEE38_26185 | ankyrin repeat domain-containing protein |
| 5077 | QGCO01000028.1 | MBX4114046.1 | open | 204 [NA] | 67 [AA] | 13734-13937 | DEE38_26190 | hypothetical protein |
| 5078 | QGCO01000028.1 | MBX4114047.1 | open | 1635 [NA] | 544 [AA] | 14639-16273 | DEE38_26195 | tyrosine-type recombinase/integrase |
| 5079 | QGCO01000029.1 | MBX4114048.1 | open | 579 [NA] | 192 [AA] | 1305-1883 | DEE38_26215 | hypothetical protein |
| 5080 | QGCO01000029.1 | MBX4114049.1 | open | 522 [NA] | 173 [AA] | 2140-2661 | DEE38_26220 | lysis protein |
| 5081 | QGCO01000029.1 | MBX4114050.1 | open | 234 [NA] | 77 [AA] | 3858-4091 | DEE38_26230 | hypothetical protein |
| 5082 | QGCO01000029.1 | MBX4114051.1 | open | 351 [NA] | 116 [AA] | 4258-4608 | DEE38_26235 | phage tail assembly chaperone |
| 5083 | QGCO01000029.1 | MBX4114052.1 | open | 1110 [NA] | 369 [AA] | 4703-5812 | DEE38_26240 | enoyl-CoA hydratase/isomerase family protein |
| 5084 | QGCO01000029.1 | MBX4114053.1 | open | 906 [NA] | 301 [AA] | 5960-6865 | DEE38_26245 | sterol desaturase family protein |
| 5085 | QGCO01000029.1 | MBX4114054.1 | open | 870 [NA] | 289 [AA] | 6858-7727 | DEE38_26250 | LysR family transcriptional regulator |
| 5086 | QGCO01000029.1 | MBX4114055.1 | open | 1590 [NA] | 529 [AA] | 7984-9573 | DEE38_26255 | sulfurtransferase |
| 5087 | QGCO01000029.1 | MBX4114056.1 | open | 1821 [NA] | 606 [AA] | 9888-11708 | DEE38_26260 | translational GTPase TypA |
| 5088 | QGCO01000029.1 | MBX4114057.1 | open | 519 [NA] | 172 [AA] | 11959-12477 | DEE38_26265 | MarR family transcriptional regulator |
| 5089 | QGCO01000029.1 | MBX4114058.1 | open | 1530 [NA] | 509 [AA] | 12559-14088 | DEE38_26270 | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor |
| 5090 | QGCO01000029.1 | MBX4114059.1 | open | 1290 [NA] | 429 [AA] | 14145-15434 | DEE38_26275 | HlyD family secretion protein |
| 5091 | QGCO01000029.1 | MBX4114060.1 | open | 1557 [NA] | 518 [AA] | 15438-16994 | DEE38_26280 | DHA2 family efflux MFS transporter permease subunit |
| 5092 | QGCO01000030.1 | MBX4114061.1 | open | 948 [NA] | 315 [AA] | 1037-1984 | DEE38_26290 | LysR family transcriptional regulator |
| 5093 | QGCO01000030.1 | MBX4114062.1 | open | 2262 [NA] | 753 [AA] | 2433-4694 | DEE38_26295 | hypothetical protein |
| 5094 | QGCO01000030.1 | MBX4114063.1 | open | 1410 [NA] | 469 [AA] | 5007-6416 | DEE38_26300 | hypothetical protein |
| 5095 | QGCO01000030.1 | MBX4114064.1 | open | 759 [NA] | 252 [AA] | 9639-10397 | DEE38_26325 | phage Gp37/Gp68 family protein |
| 5096 | QGCO01000030.1 | MBX4114065.1 | open | 1263 [NA] | 420 [AA] | 10477-11739 | DEE38_26330 | three-Cys-motif partner protein TcmP |
| 5097 | QGCO01000030.1 | MBX4114066.1 | open | 192 [NA] | 63 [AA] | 11778-11969 | DEE38_26335 | hypothetical protein |
| 5098 | QGCO01000030.1 | MBX4114067.1 | open | 417 [NA] | 138 [AA] | 13904-14320 | DEE38_26345 | DUF2946 domain-containing protein |
| 5099 | QGCO01000030.1 | MBX4114068.1 | open | 1062 [NA] | 353 [AA] | 14459-15520 | DEE38_26350 | transporter |
| 5100 | QGCO01000030.1 | MBX4114069.1 | open | 558 [NA] | 185 [AA] | 15510-16067 | DEE38_26355 | TlpA family protein disulfide reductase |
| 5101 | QGCO01000031.1 | MBX4114070.1 | open | 339 [NA] | 112 [AA] | <1-341 | DEE38_26360 | hypothetical protein |
| 5102 | QGCO01000031.1 | MBX4114071.1 | open | 249 [NA] | 82 [AA] | 1181-1429 | DEE38_26365 | DUF3562 domain-containing protein |
| 5103 | QGCO01000031.1 | MBX4114072.1 | open | 1761 [NA] | 586 [AA] | 2826-4586 | DEE38_26370 | EAL domain-containing protein |
| 5104 | QGCO01000031.1 | MBX4114073.1 | open | 1092 [NA] | 363 [AA] | 6226-7317 | DEE38_26375 | PepSY domain-containing protein |
| 5105 | QGCO01000033.1 | MBX4114074.1 | open | 378 [NA] | 125 [AA] | <1-378 | DEE38_26410 | succinate dehydrogenase, cytochrome b556 subunit |
| 5106 | QGCO01000033.1 | MBX4114075.1 | open | 366 [NA] | 121 [AA] | 389-754 | DEE38_26415 | succinate dehydrogenase, hydrophobic membrane anchor protein |
| 5107 | QGCO01000033.1 | MBX4114076.1 | open | 1779 [NA] | 592 [AA] | 758-2536 | DEE38_26420 | succinate dehydrogenase flavoprotein subunit |
| 5108 | QGCO01000033.1 | MBX4114077.1 | open | 581 [NA] | 193 [AA] | 2559->3139 | DEE38_26425 | succinate dehydrogenase iron-sulfur subunit |
| 5109 | QGCO01000034.1 | MBX4114078.1 | open | 423 [NA] | 140 [AA] | 483-905 | DEE38_26435 | flagellar basal body rod protein FlgB |
| 5110 | QGCO01000035.1 | MBX4114079.1 | open | 372 [NA] | 123 [AA] | 79-450 | DEE38_26445 | transposase |
| 5111 | QGCO01000035.1 | MBX4114080.1 | open | 291 [NA] | 96 [AA] | 492-782 | DEE38_26450 | IS66 family insertion sequence element accessory protein TnpB |
| 5112 | QGCO01000035.1 | MBX4114081.1 | open | 1530 [NA] | 509 [AA] | 845-2374 | DEE38_26455 | IS66 family transposase |
| 5113 | QGCO01000036.1 | MBX4114082.1 | open | 210 [NA] | 69 [AA] | <1-210 | DEE38_26460 | DUF1566 domain-containing protein |
| 5114 | QGCO01000036.1 | MBX4114083.1 | open | 453 [NA] | 150 [AA] | 241-693 | DEE38_26465 | DUF1566 domain-containing protein |
| 5115 | QGCO01000036.1 | MBX4114084.1 | open | 456 [NA] | 151 [AA] | 724-1179 | DEE38_26470 | DUF1566 domain-containing protein |
| 5116 | QGCO01000037.1 | MBX4114085.1 | open | 1227 [NA] | 408 [AA] | 56-1284 | DEE38_26475 | IS3 family transposase |
| 5117 | QGCO01000038.1 | MBX4114086.1 | open | 1122 [NA] | 373 [AA] | 17-1137 | DEE38_26480 | IS3 family transposase |
| 5118 | QGCO01000039.1 | MBX4114087.1 | open | 1089 [NA] | 362 [AA] | 67-1154 | DEE38_26485 | IS3 family transposase |
| 5119 | QGCO01000040.1 | MBX4114088.1 | open | 576 [NA] | 191 [AA] | <1-577 | DEE38_26490 | IS5-like element ISBmu2 family transposase |
| 5120 | QGCO01000042.1 | MBX4114089.1 | open | 434 [NA] | 145 [AA] | <1-434 | DEE38_26500 | IS5-like element ISBmu2 family transposase |