Genome Explorer: Bifidobacterium dentium Bd1 (SEQF1385.1)
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NCBI Annotation for SEQF1385.1
| Genome selected: Bifidobacterium dentium Bd1 | |||
| Contigs: | 1 | Bases: | 2636367 bps |
| CDS: | 2129 | rRNA: | 13 |
| tmRNA: | 0 | tRNA: | 55 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | CP001750.1 | ADB10700.1 | open | 1335 [NA] | 444 [AA] | 2447010-2448344 | BDP_2142 | ArgD Acetylornithine aminotransferase |
| 2002 | CP001750.1 | ADB10701.1 | open | 1635 [NA] | 544 [AA] | 2448493-2450127 | BDP_2143 | Putative PucR-like transcriptional regulator |
| 2003 | CP001750.1 | ADB10702.1 | open | 912 [NA] | 303 [AA] | 2450161-2451072 | BDP_2144 | Glk Glucokinase/Xylose repressor |
| 2004 | CP001750.1 | ADB10703.1 | open | 2028 [NA] | 675 [AA] | 2451152-2453179 | BDP_2145 | LacZ5 Beta-galactosidase |
| 2005 | CP001750.1 | ADB10704.1 | open | 1512 [NA] | 503 [AA] | 2453236-2454747 | BDP_2146 | Beta-xylosidase |
| 2006 | CP001750.1 | ADB10705.1 | open | 1092 [NA] | 363 [AA] | 2454778-2455869 | BDP_2147 | Endoglucanase family 5 |
| 2007 | CP001750.1 | ADB10706.1 | open | 2445 [NA] | 814 [AA] | 2455966-2458410 | BDP_2148 | Cellulase |
| 2008 | CP001750.1 | ADB10707.1 | open | 2031 [NA] | 676 [AA] | 2458668-2460698 | BDP_2149 | AglL Glycosyl hydrolases family 31, Alpha-glucosidase |
| 2009 | CP001750.1 | ADB10708.1 | open | 2130 [NA] | 709 [AA] | 2460811-2462940 | BDP_2151 | Bgl4 Beta-glucosidase |
| 2010 | CP001750.1 | ADB10709.1 | open | 1494 [NA] | 497 [AA] | 2463009-2464502 | BDP_2152 | Alpha-L-fucosidase |
| 2011 | CP001750.1 | ADB10710.1 | open | 723 [NA] | 240 [AA] | 2464495-2465217 | BDP_2153 | Lipolytic protein G-D-S-L family |
| 2012 | CP001750.1 | ADB10711.1 | open | 1788 [NA] | 595 [AA] | 2465340-2467127 | BDP_2154 | Extracellular solute-binding protein, family 1 |
| 2013 | CP001750.1 | ADB10712.1 | open | 897 [NA] | 298 [AA] | 2467251-2468147 | BDP_2155 | Sugar ABC transporter, permease protein |
| 2014 | CP001750.1 | ADB10713.1 | open | 939 [NA] | 312 [AA] | 2468208-2469146 | BDP_2156 | Permease protein of ABC transporter system for sugars |
| 2015 | CP001750.1 | ADB10714.1 | open | 663 [NA] | 220 [AA] | 2469446-2470108 | BDP_2157 | Conserved hypothetical membrane spanning protein |
| 2016 | CP001750.1 | ADB10715.1 | open | 2418 [NA] | 805 [AA] | 2470418-2472835 | BDP_2158 | AglL Glycosyl hydrolases family 31, Alpha-glucosidase |
| 2017 | CP001750.1 | ADB10716.1 | open | 861 [NA] | 286 [AA] | 2472929-2473789 | BDP_2159 | Permease protein of ABC transporter system for sugars |
| 2018 | CP001750.1 | ADB10717.1 | open | 972 [NA] | 323 [AA] | 2473794-2474765 | BDP_2160 | Sugar-binding protein of ABC transporter system |
| 2019 | CP001750.1 | ADB10718.1 | open | 1314 [NA] | 437 [AA] | 2474911-2476224 | BDP_2161 | Solute binding protein of ABC transporter system for sugars |
| 2020 | CP001750.1 | ADB10719.1 | open | 1020 [NA] | 339 [AA] | 2476376-2477395 | BDP_2162 | Transcriptional regulator, LacI family |
| 2021 | CP001750.1 | ADB10720.1 | open | 1146 [NA] | 381 [AA] | 2477638-2478783 | BDP_2163 | Conserved hypothetical protein |
| 2022 | CP001750.1 | ADB10721.1 | open | 879 [NA] | 292 [AA] | 2478885-2479763 | BDP_2164 | Sugar ABC transporter, permease protein |
| 2023 | CP001750.1 | ADB10722.1 | open | 150 [NA] | 49 [AA] | 2479780-2479929 | BDP_2165 | Binding-protein-dependent transport systems inner membrane component |
| 2024 | CP001750.1 | ADB10723.1 | open | 1125 [NA] | 374 [AA] | 2480053-2481177 | BDP_2166 | Transcriptional regulator, LacI family |
| 2025 | CP001750.1 | ADB10724.1 | open | 678 [NA] | 225 [AA] | 2481814-2482491 | BDP_2167 | DedA family protein |
| 2026 | CP001750.1 | ADB10725.1 | open | 1128 [NA] | 375 [AA] | 2483228-2484355 | BDP_2168 | predicted ATPase, AAA+ superfamily |
| 2027 | CP001750.1 | ADB10726.1 | open | 969 [NA] | 322 [AA] | 2484494-2485462 | BDP_2169 | LacI-type transcriptional regulator |
| 2028 | CP001750.1 | ADB10727.1 | open | 1413 [NA] | 470 [AA] | 2485556-2486968 | BDP_2170 | Sucrose-6-phosphate hydrolase |
| 2029 | CP001750.1 | ADB10728.1 | open | 1359 [NA] | 452 [AA] | 2487034-2488392 | BDP_2171 | Conserved hypothetical protein |
| 2030 | CP001750.1 | ADB10729.1 | open | 807 [NA] | 268 [AA] | 2488440-2489246 | BDP_2172 | Permease protein of ABC transporter system for sugars |
| 2031 | CP001750.1 | ADB10730.1 | open | 795 [NA] | 264 [AA] | 2489276-2490070 | BDP_2173 | Permease protein of ABC transporter system for sugars |
| 2032 | CP001750.1 | ADB10731.1 | open | 1272 [NA] | 423 [AA] | 2490253-2491524 | BDP_2174 | Solute binding protein of ABC transporter system |
| 2033 | CP001750.1 | ADB10732.1 | open | 708 [NA] | 235 [AA] | 2491941-2492648 | BDP_2175 | Haloacid dehalogenase-like hydrolase (HAD superfamily) |
| 2034 | CP001750.1 | ADB10733.1 | open | 237 [NA] | 78 [AA] | 2492814-2493050 | BDP_2176 | Conserved hypothetical protein |
| 2035 | CP001750.1 | ADB10734.1 | open | 564 [NA] | 187 [AA] | 2493369-2493932 | BDP_2177 | Heat shock regulatory protein hspR |
| 2036 | CP001750.1 | ADB10735.1 | open | 1026 [NA] | 341 [AA] | 2493938-2494963 | BDP_2178 | Chaperone protein DnaJ |
| 2037 | CP001750.1 | ADB10736.1 | open | 651 [NA] | 216 [AA] | 2494994-2495644 | BDP_2179 | GrpE protein |
| 2038 | CP001750.1 | ADB10737.1 | open | 1872 [NA] | 623 [AA] | 2495647-2497518 | BDP_2180 | Chaperone protein DnaK |
| 2039 | CP001750.1 | ADB10738.1 | open | 2082 [NA] | 693 [AA] | 2497870-2499951 | BDP_2181 | Alkaline phosphatase-like protein |
| 2040 | CP001750.1 | ADB10739.1 | open | 2562 [NA] | 853 [AA] | 2500207-2502768 | BDP_2182 | AglL Glycosyl hydrolases family 31, Alpha-glucosidase |
| 2041 | CP001750.1 | ADB10740.1 | open | 822 [NA] | 273 [AA] | 2502770-2503591 | BDP_2183 | Sugar ABC transporter, permease protein |
| 2042 | CP001750.1 | ADB10741.1 | open | 888 [NA] | 295 [AA] | 2503588-2504475 | BDP_2184 | Sugar-binding protein of ABC transporter system |
| 2043 | CP001750.1 | ADB10742.1 | open | 1461 [NA] | 486 [AA] | 2504638-2506098 | BDP_2185 | Solute-binding protein of ABC transporter system (lactose) |
| 2044 | CP001750.1 | ADB10743.1 | open | 1017 [NA] | 338 [AA] | 2506296-2507312 | BDP_2186 | Transcriptional regulator, LacI family |
| 2045 | CP001750.1 | ADB10744.1 | open | 915 [NA] | 304 [AA] | 2507391-2508305 | BDP_2187 | Conserved hypothetical membrane spanning protein with DUF81 domain |
| 2046 | CP001750.1 | ADB10745.1 | open | 1050 [NA] | 349 [AA] | 2508389-2509438 | BDP_2188 | Sortase |
| 2047 | CP001750.1 | ADB10746.1 | open | 999 [NA] | 332 [AA] | 2509524-2510522 | BDP_2189 | Collagen adhesin precursor |
| 2048 | CP001750.1 | ADB10747.1 | open | 1362 [NA] | 453 [AA] | 2510823-2512184 | BDP_2190 | Cell surface protein with gram positive anchor and Cna protein B-type domains |
| 2049 | CP001750.1 | ADB10748.1 | open | 3978 [NA] | 1325 [AA] | 2512646-2516623 | BDP_2191 | Cell surface protein with gram positive anchor and Cna protein B-type domains |
| 2050 | CP001750.1 | ADB10749.1 | open | 1032 [NA] | 343 [AA] | 2517336-2518367 | BDP_2192 | Transcriptional regulator, LacI family |
| 2051 | CP001750.1 | ADB10750.1 | open | 801 [NA] | 266 [AA] | 2518524-2519324 | BDP_2193 | Hypothetical membrane spanning protein |
| 2052 | CP001750.1 | ADB10751.1 | open | 810 [NA] | 269 [AA] | 2519330-2520139 | BDP_2194 | Haloacid dehalogenase-like hydrolase (HAD superfamily) |
| 2053 | CP001750.1 | ADB10752.1 | open | 2049 [NA] | 682 [AA] | 2520150-2522198 | BDP_2195 | ApuB Amylopullulanase |
| 2054 | CP001750.1 | ADB10753.1 | open | 765 [NA] | 254 [AA] | 2522203-2522967 | BDP_2196 | MalG Maltose transport system permease protein |
| 2055 | CP001750.1 | ADB10754.1 | open | 1404 [NA] | 467 [AA] | 2523099-2524502 | BDP_2197 | MalC Maltodextrin transport system permease protein |
| 2056 | CP001750.1 | ADB10755.1 | open | 1239 [NA] | 412 [AA] | 2524795-2526033 | BDP_2199 | MalE Maltose/maltodextrin-binding protein |
| 2057 | CP001750.1 | ADB10756.1 | open | 1611 [NA] | 536 [AA] | 2526272-2527882 | BDP_2200 | Agl3 Alpha-glucosidase |
| 2058 | CP001750.1 | ADB10757.1 | open | 2166 [NA] | 721 [AA] | 2528134-2530299 | BDP_2201 | MalQ1 4-alpha-glucanotransferase |
| 2059 | CP001750.1 | ADB10758.1 | open | 1761 [NA] | 586 [AA] | 2530413-2532173 | BDP_2202 | Agl2 Alpha-glucosidase |
| 2060 | CP001750.1 | ADB10759.1 | open | 606 [NA] | 201 [AA] | 2532332-2532937 | BDP_2203 | Conserved hypothetical membrane spanning protein |
| 2061 | CP001750.1 | ADB10760.1 | open | 843 [NA] | 280 [AA] | 2533001-2533843 | BDP_2204 | Permease protein of ABC transporter system for sugars |
| 2062 | CP001750.1 | ADB10761.1 | open | 855 [NA] | 284 [AA] | 2533840-2534694 | BDP_2205 | Permease protein of ABC transporter system for sugars |
| 2063 | CP001750.1 | ADB10762.1 | open | 1011 [NA] | 336 [AA] | 2535029-2536039 | BDP_2206 | Transcriptional regulator, LacI family |
| 2064 | CP001750.1 | ADB10763.1 | open | 1347 [NA] | 448 [AA] | 2536265-2537611 | BDP_2207 | Solute binding protein of ABC transporter system for sugars |
| 2065 | CP001750.1 | ADB10764.1 | open | 705 [NA] | 234 [AA] | 2538129-2538833 | BDP_2208 | Phosphoglycerate mutase family protein |
| 2066 | CP001750.1 | ADB10765.1 | open | 330 [NA] | 109 [AA] | 2539013-2539342 | BDP_2209 | Conserved hypothetical protein |
| 2067 | CP001750.1 | ADB10766.1 | open | 591 [NA] | 196 [AA] | 2539351-2539941 | BDP_2210 | Hypothetical membrane spanning protein |
| 2068 | CP001750.1 | ADB10767.1 | open | 2418 [NA] | 805 [AA] | 2539941-2542358 | BDP_2211 | LacZ6 Beta-galactosidase |
| 2069 | CP001750.1 | ADB10768.1 | open | 408 [NA] | 135 [AA] | 2542445-2542852 | BDP_2212 | Hypothetical protein |
| 2070 | CP001750.1 | ADB10769.1 | open | 3120 [NA] | 1039 [AA] | 2542862-2545981 | BDP_2213 | Bgl5 Beta-glucosidase |
| 2071 | CP001750.1 | ADB10770.1 | open | 717 [NA] | 238 [AA] | 2546097-2546813 | BDP_2214 | VirR Two-component response regulator |
| 2072 | CP001750.1 | ADB10771.1 | open | 1302 [NA] | 433 [AA] | 2546810-2548111 | BDP_2215 | Two-component sensor kinase VirS |
| 2073 | CP001750.1 | ADB10772.1 | open | 789 [NA] | 262 [AA] | 2548151-2548939 | BDP_2216 | Chromate reductase/NADPH-dependent FMN reductase/Oxygen-insensitive NADPH nitroreductase |
| 2074 | CP001750.1 | ADB10773.1 | open | 252 [NA] | 83 [AA] | 2549115-2549366 | BDP_2217 | Conserved hypothetical protein |
| 2075 | CP001750.1 | ADB10774.1 | open | 765 [NA] | 254 [AA] | 2555452-2556216 | BDP_2219 | SIR2 family protein |
| 2076 | CP001750.1 | ADB10775.1 | open | 1308 [NA] | 435 [AA] | 2556545-2557852 | BDP_2220 | TdcB Threonine dehydratase |
| 2077 | CP001750.1 | ADB10776.1 | open | 1821 [NA] | 606 [AA] | 2557979-2559799 | BDP_2221 | Oligo-1,6-glucosidase |
| 2078 | CP001750.1 | ADB10777.1 | open | 138 [NA] | 45 [AA] | 2559989-2560126 | BDP_2222 | Hypothetical protein |
| 2079 | CP001750.1 | ADB10778.1 | open | 150 [NA] | 49 [AA] | 2560178-2560327 | BDP_2223 | Permease protein of ABC transporter system for sugars |
| 2080 | CP001750.1 | ADB10779.1 | open | 876 [NA] | 291 [AA] | 2560546-2561421 | BDP_2224 | Raffinose transport system permease protein |
| 2081 | CP001750.1 | ADB10780.1 | open | 915 [NA] | 304 [AA] | 2561442-2562356 | BDP_2225 | Raffinose transport system permease protein |
| 2082 | CP001750.1 | ADB10781.1 | open | 1293 [NA] | 430 [AA] | 2562371-2563663 | BDP_2226 | Raffinose-binding protein |
| 2083 | CP001750.1 | ADB10782.1 | open | 1134 [NA] | 377 [AA] | 2563915-2565048 | BDP_2227 | Transcriptional repressor, ROK family |
| 2084 | CP001750.1 | ADB10783.1 | open | 2295 [NA] | 764 [AA] | 2565497-2567791 | BDP_2229 | Aga Alpha-galactosidase |
| 2085 | CP001750.1 | ADB10784.1 | open | 438 [NA] | 145 [AA] | 2567949-2568386 | BDP_2230 | MesJ tRNA-specific adenosine deaminase |
| 2086 | CP001750.1 | ADB10785.1 | open | 1980 [NA] | 659 [AA] | 2568579-2570558 | BDP_2231 | NhaP Na+/H+ antiporter nhaP |
| 2087 | CP001750.1 | ADB10786.1 | open | 759 [NA] | 252 [AA] | 2570846-2571604 | BDP_2232 | Phospholipase/carboxylesterase |
| 2088 | CP001750.1 | ADB10787.1 | open | 582 [NA] | 193 [AA] | 2571715-2572296 | BDP_2233 | Dcd Deoxycytidine triphosphate deaminase |
| 2089 | CP001750.1 | ADB10788.1 | open | 2922 [NA] | 973 [AA] | 2572450-2575371 | BDP_2234 | PacL2 Calcium-transporting ATPase |
| 2090 | CP001750.1 | ADB10789.1 | open | 123 [NA] | 40 [AA] | 2575853-2575975 | BDP_2235 | Conserved hypothetical protein |
| 2091 | CP001750.1 | ADB10790.1 | open | 990 [NA] | 329 [AA] | 2576220-2577209 | BDP_2236 | SpoU rRNA methylase family protein |
| 2092 | CP001750.1 | ADB10791.1 | open | 1389 [NA] | 462 [AA] | 2577285-2578673 | BDP_2237 | Conserved hypothetical protein |
| 2093 | CP001750.1 | ADB10792.1 | open | 1128 [NA] | 375 [AA] | 2578922-2580049 | BDP_2238 | ATP-binding protein of ABC transporter system for sugars |
| 2094 | CP001750.1 | ADB10793.1 | open | 717 [NA] | 238 [AA] | 2580370-2581086 | BDP_2240 | VirR Two-component response regulator |
| 2095 | CP001750.1 | ADB10794.1 | open | 1374 [NA] | 457 [AA] | 2581083-2582456 | BDP_2241 | VirS Two-component sensor kinase |
| 2096 | CP001750.1 | ADB10795.1 | open | 1389 [NA] | 462 [AA] | 2582967-2584355 | BDP_2242 | Chloride channel protein |
| 2097 | CP001750.1 | ADB10796.1 | open | 1632 [NA] | 543 [AA] | 2584444-2586075 | BDP_2243 | GatA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A |
| 2098 | CP001750.1 | ADB10797.1 | open | 804 [NA] | 267 [AA] | 2586072-2586875 | BDP_2244 | ATP-binding protein of ABC transporter system |
| 2099 | CP001750.1 | ADB10798.1 | open | 828 [NA] | 275 [AA] | 2586895-2587722 | BDP_2245 | Permease protein of ABC transporter system |
| 2100 | CP001750.1 | ADB10799.1 | open | 981 [NA] | 326 [AA] | 2587750-2588730 | BDP_2246 | Twin-arginine translocation pathway signal |
| 2101 | CP001750.1 | ADB10800.1 | open | 1164 [NA] | 387 [AA] | 2588792-2589955 | BDP_2247 | Acetamidase/Formamidase |
| 2102 | CP001750.1 | ADB10801.1 | open | 741 [NA] | 246 [AA] | 2590134-2590874 | BDP_2248 | Transcriptional regulator, GntR family |
| 2103 | CP001750.1 | ADB10802.1 | open | 633 [NA] | 210 [AA] | 2590963-2591595 | BDP_2249 | LacA Galactoside O-acetyltransferase |
| 2104 | CP001750.1 | ADB10803.1 | open | 1152 [NA] | 383 [AA] | 2591796-2592947 | BDP_2250 | AspC Aspartate aminotransferase |
| 2105 | CP001750.1 | ADB10804.1 | open | 1428 [NA] | 475 [AA] | 2593063-2594490 | BDP_2251 | ATPase |
| 2106 | CP001750.1 | ADB10805.1 | open | 573 [NA] | 190 [AA] | 2594563-2595135 | BDP_2252 | conserved hypothetical protein |
| 2107 | CP001750.1 | ADB10806.1 | open | 2430 [NA] | 809 [AA] | 2595128-2597557 | BDP_2253 | bgl4 Beta-glucosidase |
| 2108 | CP001750.1 | ADB10807.1 | open | 2892 [NA] | 963 [AA] | 2597881-2600772 | BDP_2254 | Bgl5 Beta-glucosidase |
| 2109 | CP001750.1 | ADB10808.1 | open | 600 [NA] | 199 [AA] | 2601049-2601648 | BDP_2256 | PAP2 family protein |
| 2110 | CP001750.1 | ADB10809.1 | open | 2907 [NA] | 968 [AA] | 2607933-2610839 | BDP_2259 | Bgl5 Beta-glucosidase |
| 2111 | CP001750.1 | ADB10810.1 | open | 1989 [NA] | 662 [AA] | 2611135-2613123 | BDP_2260 | Serine/threonine protein kinase |
| 2112 | CP001750.1 | ADB10811.1 | open | 981 [NA] | 326 [AA] | 2613261-2614241 | BDP_2261 | Protein-disulfide isomerase |
| 2113 | CP001750.1 | ADB10812.1 | open | 1404 [NA] | 467 [AA] | 2614735-2616138 | BDP_2262 | Hypothetical secreted protein |
| 2114 | CP001750.1 | ADB10813.1 | open | 927 [NA] | 308 [AA] | 2616162-2617088 | BDP_2263 | KsgA Dimethyladenosine transferase |
| 2115 | CP001750.1 | ADB10814.1 | open | 879 [NA] | 292 [AA] | 2617106-2617984 | BDP_2264 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
| 2116 | CP001750.1 | ADB10815.1 | open | 639 [NA] | 212 [AA] | 2618029-2618667 | BDP_2265 | Conserved hypothetical protein |
| 2117 | CP001750.1 | ADB10816.1 | open | 1326 [NA] | 441 [AA] | 2618730-2620055 | BDP_2266 | PcnA tRNA nucleotidyltransferase |
| 2118 | CP001750.1 | ADB10817.1 | open | 651 [NA] | 216 [AA] | 2620442-2621092 | BDP_2267 | Phosphohydrolase (MutT/nudix family protein) |
| 2119 | CP001750.1 | ADB10818.1 | open | 2106 [NA] | 701 [AA] | 2621092-2623197 | BDP_2268 | Conserved hypothetical secreted protein |
| 2120 | CP001750.1 | ADB10819.1 | open | 3717 [NA] | 1238 [AA] | 2623194-2626910 | BDP_2269 | Integral membrane protein MviN |
| 2121 | CP001750.1 | ADB10820.1 | open | 1734 [NA] | 577 [AA] | 2627056-2628789 | BDP_2270 | IlvB Acetolactate synthase large subunit |
| 2122 | CP001750.1 | ADB10821.1 | open | 993 [NA] | 330 [AA] | 2628910-2629902 | BDP_2271 | trxB2 Thioredoxin reductase |
| 2123 | CP001750.1 | ADB10822.1 | open | 1308 [NA] | 435 [AA] | 2630079-2631386 | BDP_2272 | Chromosome partitioning protein ParB |
| 2124 | CP001750.1 | ADB10823.1 | open | 945 [NA] | 314 [AA] | 2631389-2632333 | BDP_2273 | Chromosome partitioning protein PrA |
| 2125 | CP001750.1 | ADB10824.1 | open | 684 [NA] | 227 [AA] | 2632601-2633284 | BDP_2274 | GidB Methyltransferase gidB (Glucose inhibited division protein B) |
| 2126 | CP001750.1 | ADB10825.1 | open | 546 [NA] | 181 [AA] | 2633540-2634085 | BDP_2275 | Jag protein |
| 2127 | CP001750.1 | ADB10826.1 | open | 930 [NA] | 309 [AA] | 2634205-2635134 | BDP_2276 | YidC Inner membrane protein (Preprotein translocase subunit YidC) |
| 2128 | CP001750.1 | ADB10827.1 | open | 363 [NA] | 120 [AA] | 2635535-2635897 | BDP_2277 | RnpA Ribonuclease P protein component |
| 2129 | CP001750.1 | ADB10828.1 | open | 135 [NA] | 44 [AA] | 2635918-2636052 | BDP_2278 | RpmH LSU ribosomal protein L34P |