Genome Explorer: Lactobacillus gasseri UMB1196 (SEQF4563.1)
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NCBI Annotation for SEQF4563.1
| Genome selected: Lactobacillus gasseri UMB1196 | |||
| Contigs: | 328 | Bases: | 1535805 bps |
| CDS: | 54 | rRNA: | 5 |
| tmRNA: | 1 | tRNA: | 48 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1501 | VNFU01000276.1 | TVU98814.1 | open | 842 [NA] | 280 [AA] | 47->888 | FOF74_08030 | 50S ribosomal protein L11 methyltransferase |
| 1502 | VNFU01000277.1 | TVU98812.1 | open | 777 [NA] | 258 [AA] | 110->888 | FOF74_08035 | L-lactate dehydrogenase |
| 1503 | VNFU01000278.1 | TVU98808.1 | open | 718 [NA] | 239 [AA] | <1-718 | FOF74_08040 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme |
| 1504 | VNFU01000278.1 | TVU98809.1 | open | 76 [NA] | 25 [AA] | 802->877 | FOF74_08045 | peptide-methionine (R)-S-oxide reductase |
| 1505 | VNFU01000279.1 | TVU98805.1 | open | 513 [NA] | 170 [AA] | <1-514 | FOF74_08050 | mandelate racemase/muconate lactonizing enzyme family protein |
| 1506 | VNFU01000280.1 | TVU98803.1 | open | 873 [NA] | 291 [AA] | <1->873 | FOF74_08060 | DNA polymerase III subunit alpha |
| 1507 | VNFU01000281.1 | TVU98800.1 | open | 434 [NA] | 145 [AA] | <1-434 | FOF74_08065 | site-specific integrase |
| 1508 | VNFU01000282.1 | TVU98797.1 | open | 870 [NA] | 290 [AA] | <1->872 | FOF74_08070 | MFS transporter |
| 1509 | VNFU01000283.1 | TVU98796.1 | open | 132 [NA] | 44 [AA] | 741->872 | FOF74_08080 | MarR family transcriptional regulator |
| 1510 | VNFU01000284.1 | TVU98792.1 | open | 869 [NA] | 289 [AA] | <1->871 | FOF74_08085 | rod shape-determining protein RodA |
| 1511 | VNFU01000285.1 | TVU98789.1 | open | 870 [NA] | 290 [AA] | <1->871 | FOF74_08090 | branched-chain amino acid transport system II carrier protein |
| 1512 | VNFU01000286.1 | TVU98786.1 | open | 865 [NA] | 288 [AA] | <1->865 | FOF74_08095 | glycerophosphodiester phosphodiesterase |
| 1513 | VNFU01000287.1 | TVU98783.1 | open | 862 [NA] | 287 [AA] | <1->863 | FOF74_08100 | ATP-dependent helicase |
| 1514 | VNFU01000288.1 | TVU98780.1 | open | 819 [NA] | 272 [AA] | 32-850 | FOF74_08105 | ABC transporter permease |
| 1515 | VNFU01000289.1 | TVU98776.1 | open | 654 [NA] | 217 [AA] | <1-654 | FOF74_08110 | beta-lactamase family protein |
| 1516 | VNFU01000289.1 | TVU98777.1 | open | 150 [NA] | 49 [AA] | 692->843 | FOF74_08115 | DUF1727 domain-containing protein |
| 1517 | VNFU01000290.1 | TVU98773.1 | open | 307 [NA] | 102 [AA] | <1-307 | FOF74_08120 | type II secretion system protein |
| 1518 | VNFU01000290.1 | TVU98774.1 | open | 219 [NA] | 72 [AA] | 313-531 | FOF74_08125 | type II secretion system protein |
| 1519 | VNFU01000290.1 | TVU98775.1 | open | 315 [NA] | 104 [AA] | 521->837 | FOF74_08130 | type II secretion system protein |
| 1520 | VNFU01000291.1 | TVU98738.1 | open | 573 [NA] | 190 [AA] | <1-575 | FOF74_08135 | hypothetical protein |
| 1521 | VNFU01000291.1 | TVU98739.1 | open | 246 [NA] | 81 [AA] | 583->829 | FOF74_08140 | DUF1461 domain-containing protein |
| 1522 | VNFU01000292.1 | TVU98735.1 | open | 636 [NA] | 211 [AA] | <1-636 | FOF74_08145 | LysM peptidoglycan-binding domain-containing protein |
| 1523 | VNFU01000293.1 | TVU98706.1 | open | 791 [NA] | 264 [AA] | <1-791 | FOF74_08150 | hypothetical protein |
| 1524 | VNFU01000294.1 | TVU98705.1 | open | 819 [NA] | 273 [AA] | <1->820 | FOF74_08155 | DNA polymerase III subunit alpha |
| 1525 | VNFU01000295.1 | TVU98701.1 | open | 447 [NA] | 148 [AA] | <1-447 | FOF74_08160 | redox-sensing transcriptional repressor Rex |
| 1526 | VNFU01000295.1 | TVU98702.1 | open | 233 [NA] | 77 [AA] | 586->818 | FOF74_08165 | TIGR00730 family Rossman fold protein |
| 1527 | VNFU01000296.1 | TVU98676.1 | open | 123 [NA] | 40 [AA] | <1-125 | FOF74_08170 | signal peptidase II |
| 1528 | VNFU01000296.1 | TVU98677.1 | open | 663 [NA] | 221 [AA] | 140->802 | FOF74_08175 | RluA family pseudouridine synthase |
| 1529 | VNFU01000297.1 | TVU98673.1 | open | 768 [NA] | 255 [AA] | 34->802 | FOF74_08180 | aspartate kinase |
| 1530 | VNFU01000298.1 | TVU98630.1 | open | 345 [NA] | 114 [AA] | 425-769 | FOF74_08190 | hypothetical protein |
| 1531 | VNFU01000298.1 | TVU98631.1 | open | 422 [NA] | 141 [AA] | <1-422 | FOF74_08185 | formate--tetrahydrofolate ligase |
| 1532 | VNFU01000299.1 | TVU98628.1 | open | 787 [NA] | 262 [AA] | <1->787 | FOF74_08195 | UDP-N-acetylmuramate dehydrogenase |
| 1533 | VNFU01000300.1 | TVU98607.1 | open | 764 [NA] | 255 [AA] | <1->764 | FOF74_08200 | SAM-dependent DNA methyltransferase |
| 1534 | VNFU01000301.1 | TVU98603.1 | open | 678 [NA] | 226 [AA] | <1-678 | FOF74_08205 | DeoR/GlpR transcriptional regulator |
| 1535 | VNFU01000303.1 | TVU98553.1 | open | 181 [NA] | 60 [AA] | 573->753 | FOF74_08215 | hypothetical protein |
| 1536 | VNFU01000304.1 | TVU98551.1 | open | 737 [NA] | 246 [AA] | <1->739 | FOF74_08220 | bifunctional metallophosphatase/5'-nucleotidase |
| 1537 | VNFU01000306.1 | TVU98523.1 | open | 523 [NA] | 174 [AA] | <1-523 | FOF74_08230 | hypothetical protein |
| 1538 | VNFU01000307.1 | TVU98505.1 | open | 627 [NA] | 209 [AA] | 84->710 | FOF74_08235 | nitroreductase |
| 1539 | VNFU01000308.1 | TVU98502.1 | open | 132 [NA] | 43 [AA] | <1-133 | FOF74_08240 | orotidine-5'-phosphate decarboxylase |
| 1540 | VNFU01000308.1 | TVU98503.1 | open | 574 [NA] | 191 [AA] | 135->708 | FOF74_08245 | orotate phosphoribosyltransferase |
| 1541 | VNFU01000309.1 | TVU98483.1 | open | 504 [NA] | 167 [AA] | <1-505 | FOF74_08250 | MFS transporter |
| 1542 | VNFU01000310.1 | TVU98462.1 | open | 564 [NA] | 187 [AA] | 131->694 | FOF74_08255 | NUDIX hydrolase |
| 1543 | VNFU01000311.1 | TVU98460.1 | open | 627 [NA] | 208 [AA] | 60->686 | FOF74_08260 | endonuclease III |
| 1544 | VNFU01000312.1 | TVU98443.1 | open | 507 [NA] | 168 [AA] | 114-620 | FOF74_08265 | hypothetical protein |
| 1545 | VNFU01000313.1 | TVU98425.1 | open | 684 [NA] | 228 [AA] | <1->684 | FOF74_08270 | mandelate racemase/muconate lactonizing enzyme family protein |
| 1546 | VNFU01000314.1 | TVU98422.1 | open | 576 [NA] | 191 [AA] | 95->671 | FOF74_08275 | homoserine kinase |
| 1547 | VNFU01000315.1 | TVU98404.1 | open | 668 [NA] | 222 [AA] | <1->670 | FOF74_08280 | glycosyltransferase family 2 protein |
| 1548 | VNFU01000316.1 | TVU98389.1 | open | 667 [NA] | 222 [AA] | <1-667 | FOF74_08285 | DNA repair exonuclease |
| 1549 | VNFU01000317.1 | TVU98371.1 | open | 612 [NA] | 203 [AA] | 50->661 | FOF74_08290 | DNA repair protein RecN |
| 1550 | VNFU01000318.1 | TVU98367.1 | open | 550 [NA] | 183 [AA] | 109->658 | FOF74_08300 | DNA translocase FtsK |
| 1551 | VNFU01000318.1 | TVU98368.1 | open | 87 [NA] | 28 [AA] | <1-87 | FOF74_08295 | DUF1149 domain-containing protein |
| 1552 | VNFU01000319.1 | TVU98345.1 | open | 594 [NA] | 198 [AA] | 50->643 | FOF74_08305 | trehalose operon repressor |
| 1553 | VNFU01000320.1 | TVU98326.1 | open | 623 [NA] | 208 [AA] | <1->625 | FOF74_08310 | AAA family ATPase |
| 1554 | VNFU01000321.1 | TVU98308.1 | open | 623 [NA] | 208 [AA] | <1->624 | FOF74_08315 | adhesin |
| 1555 | VNFU01000322.1 | TVU98292.1 | open | 461 [NA] | 153 [AA] | 159->619 | FOF74_08320 | adaptor protein MecA |
| 1556 | VNFU01000323.1 | TVU98276.1 | open | 614 [NA] | 205 [AA] | <1->615 | FOF74_08325 | ABC transporter ATP-binding protein |
| 1557 | VNFU01000324.1 | TVU98273.1 | open | 327 [NA] | 108 [AA] | 151-477 | FOF74_08335 | bacteriocin immunity protein |
| 1558 | VNFU01000324.1 | TVU98274.1 | open | 84 [NA] | 27 [AA] | <1-86 | FOF74_08330 | GntR family transcriptional regulator |
| 1559 | VNFU01000325.1 | TVU98256.1 | open | 599 [NA] | 200 [AA] | 14->612 | FOF74_08340 | nitroreductase |
| 1560 | VNFU01000326.1 | TVU98243.1 | open | 610 [NA] | 203 [AA] | <1->612 | FOF74_08345 | ABC transporter ATP-binding protein |
| 1561 | VNFU01000327.1 | TVU98226.1 | open | 582 [NA] | 193 [AA] | <1-583 | FOF74_08350 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase |