Genome Explorer: Helicobacter pylori ASHA-003 (SEQF10123.1)
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PROKKA Annotation for SEQF10123.1
| Genome selected: Helicobacter pylori ASHA-003 | |||
| Contigs: | 1 | Bases: | 1704243 bps |
| CDS: | 1580 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 36 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1501 | SEQF10123.1_CP051292.1 | SEQF10123.1_01553 | open | 522 [NA] | 173 [AA] | 1616901-1617422 | hypothetical protein | |
| 1502 | SEQF10123.1_CP051292.1 | SEQF10123.1_01554 | open | 1140 [NA] | 379 [AA] | 1617467-1618606 | hypothetical protein | |
| 1503 | SEQF10123.1_CP051292.1 | SEQF10123.1_01555 | open | 1572 [NA] | 523 [AA] | 1618762-1620333 | hypothetical protein | |
| 1504 | SEQF10123.1_CP051292.1 | SEQF10123.1_01556 | open | 198 [NA] | 65 [AA] | 1620299-1620496 | hypothetical protein | |
| 1505 | SEQF10123.1_CP051292.1 | SEQF10123.1_01558 | open | 504 [NA] | 167 [AA] | 1625106-1625609 | hypothetical protein | |
| 1506 | SEQF10123.1_CP051292.1 | SEQF10123.1_01559 | open | 879 [NA] | 292 [AA] | 1626278-1627156 | hypothetical protein | |
| 1507 | SEQF10123.1_CP051292.1 | SEQF10123.1_01560 | open | 849 [NA] | 282 [AA] | 1627156-1628004 | bioB | Biotin synthase |
| 1508 | SEQF10123.1_CP051292.1 | SEQF10123.1_01561 | open | 2343 [NA] | 780 [AA] | 1628431-1630773 | hypothetical protein | |
| 1509 | SEQF10123.1_CP051292.1 | SEQF10123.1_01562 | open | 1845 [NA] | 614 [AA] | 1630767-1632611 | hypothetical protein | |
| 1510 | SEQF10123.1_CP051292.1 | SEQF10123.1_01563 | open | 849 [NA] | 282 [AA] | 1632736-1633584 | hypothetical protein | |
| 1511 | SEQF10123.1_CP051292.1 | SEQF10123.1_01564 | open | 141 [NA] | 46 [AA] | 1633724-1633864 | hypothetical protein | |
| 1512 | SEQF10123.1_CP051292.1 | SEQF10123.1_01565 | open | 123 [NA] | 40 [AA] | 1633815-1633937 | hypothetical protein | |
| 1513 | SEQF10123.1_CP051292.1 | SEQF10123.1_01566 | open | 828 [NA] | 275 [AA] | 1634015-1634842 | tyrC | Cyclohexadienyl dehydrogenase |
| 1514 | SEQF10123.1_CP051292.1 | SEQF10123.1_01567 | open | 2490 [NA] | 829 [AA] | 1634851-1637340 | lon | Lon protease |
| 1515 | SEQF10123.1_CP051292.1 | SEQF10123.1_01568 | open | 624 [NA] | 207 [AA] | 1637382-1638005 | bamD | Outer membrane protein assembly factor BamD |
| 1516 | SEQF10123.1_CP051292.1 | SEQF10123.1_01569 | open | 144 [NA] | 47 [AA] | 1638087-1638230 | hypothetical protein | |
| 1517 | SEQF10123.1_CP051292.1 | SEQF10123.1_01570 | open | 390 [NA] | 129 [AA] | 1638448-1638837 | fliW2 | Flagellar assembly factor FliW 2 |
| 1518 | SEQF10123.1_CP051292.1 | SEQF10123.1_01571 | open | 480 [NA] | 159 [AA] | 1639020-1639499 | fabZ | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ |
| 1519 | SEQF10123.1_CP051292.1 | SEQF10123.1_01572 | open | 813 [NA] | 270 [AA] | 1639502-1640314 | lpxA | Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
| 1520 | SEQF10123.1_CP051292.1 | SEQF10123.1_01573 | open | 1359 [NA] | 452 [AA] | 1640316-1641674 | clpX | ATP-dependent Clp protease ATP-binding subunit ClpX |
| 1521 | SEQF10123.1_CP051292.1 | SEQF10123.1_01574 | open | 1044 [NA] | 347 [AA] | 1641717-1642760 | mreB | Cell shape-determining protein MreB |
| 1522 | SEQF10123.1_CP051292.1 | SEQF10123.1_01575 | open | 747 [NA] | 248 [AA] | 1642764-1643510 | hypothetical protein | |
| 1523 | SEQF10123.1_CP051292.1 | SEQF10123.1_01576 | open | 2913 [NA] | 970 [AA] | 1643565-1646477 | hypothetical protein | |
| 1524 | SEQF10123.1_CP051292.1 | SEQF10123.1_01577 | open | 2466 [NA] | 821 [AA] | 1646488-1648953 | hypothetical protein | |
| 1525 | SEQF10123.1_CP051292.1 | SEQF10123.1_01578 | open | 1278 [NA] | 425 [AA] | 1649202-1650479 | hypothetical protein | |
| 1526 | SEQF10123.1_CP051292.1 | SEQF10123.1_01579 | open | 90 [NA] | 29 [AA] | 1650463-1650552 | hypothetical protein | |
| 1527 | SEQF10123.1_CP051292.1 | SEQF10123.1_01580 | open | 1068 [NA] | 355 [AA] | 1651009-1652076 | tsf | Elongation factor Ts |
| 1528 | SEQF10123.1_CP051292.1 | SEQF10123.1_01581 | open | 795 [NA] | 264 [AA] | 1652076-1652870 | rpsB | 30S ribosomal protein S2 |
| 1529 | SEQF10123.1_CP051292.1 | SEQF10123.1_01582 | open | 2841 [NA] | 946 [AA] | 1653119-1655959 | recB | RecBCD enzyme subunit RecB |
| 1530 | SEQF10123.1_CP051292.1 | SEQF10123.1_01583 | open | 1317 [NA] | 438 [AA] | 1655983-1657299 | nhaA | Na(+)H(+) antiporter NhaA |
| 1531 | SEQF10123.1_CP051292.1 | SEQF10123.1_01584 | open | 294 [NA] | 97 [AA] | 1657347-1657640 | yajC | Sec translocon accessory complex subunit YajC |
| 1532 | SEQF10123.1_CP051292.1 | SEQF10123.1_01585 | open | 1581 [NA] | 526 [AA] | 1657640-1659220 | secD | Protein translocase subunit SecD |
| 1533 | SEQF10123.1_CP051292.1 | SEQF10123.1_01586 | open | 972 [NA] | 323 [AA] | 1659229-1660200 | secF | Protein translocase subunit SecF |
| 1534 | SEQF10123.1_CP051292.1 | SEQF10123.1_01587 | open | 339 [NA] | 112 [AA] | 1660210-1660548 | hypothetical protein | |
| 1535 | SEQF10123.1_CP051292.1 | SEQF10123.1_01588 | open | 2421 [NA] | 806 [AA] | 1660559-1662979 | leuS | Leucine--tRNA ligase |
| 1536 | SEQF10123.1_CP051292.1 | SEQF10123.1_01589 | open | 513 [NA] | 170 [AA] | 1662976-1663488 | hypothetical protein | |
| 1537 | SEQF10123.1_CP051292.1 | SEQF10123.1_01590 | open | 1170 [NA] | 389 [AA] | 1663478-1664647 | folC | Dihydrofolate synthasefolylpolyglutamate synthase |
| 1538 | SEQF10123.1_CP051292.1 | SEQF10123.1_01591 | open | 927 [NA] | 308 [AA] | 1664647-1665573 | hypothetical protein | |
| 1539 | SEQF10123.1_CP051292.1 | SEQF10123.1_01592 | open | 942 [NA] | 313 [AA] | 1665580-1666521 | hypothetical protein | |
| 1540 | SEQF10123.1_CP051292.1 | SEQF10123.1_01593 | open | 303 [NA] | 100 [AA] | 1666548-1666850 | hypothetical protein | |
| 1541 | SEQF10123.1_CP051292.1 | SEQF10123.1_01594 | open | 3006 [NA] | 1001 [AA] | 1666854-1669859 | mfd | Transcription-repair-coupling factor |
| 1542 | SEQF10123.1_CP051292.1 | SEQF10123.1_01595 | open | 504 [NA] | 167 [AA] | 1669982-1670485 | petA | Ubiquinol-cytochrome c reductase iron-sulfur subunit |
| 1543 | SEQF10123.1_CP051292.1 | SEQF10123.1_01596 | open | 1239 [NA] | 412 [AA] | 1670496-1671734 | petB | Cytochrome b |
| 1544 | SEQF10123.1_CP051292.1 | SEQF10123.1_01597 | open | 858 [NA] | 285 [AA] | 1671731-1672588 | hypothetical protein | |
| 1545 | SEQF10123.1_CP051292.1 | SEQF10123.1_01598 | open | 504 [NA] | 167 [AA] | 1672945-1673448 | hypothetical protein | |
| 1546 | SEQF10123.1_CP051292.1 | SEQF10123.1_01599 | open | 1104 [NA] | 367 [AA] | 1673448-1674551 | ATPGTP phosphatase | |
| 1547 | SEQF10123.1_CP051292.1 | SEQF10123.1_01600 | open | 1848 [NA] | 615 [AA] | 1674888-1676735 | penA | putative peptidoglycan D%2CD-transpeptidase PenA |
| 1548 | SEQF10123.1_CP051292.1 | SEQF10123.1_01601 | open | 330 [NA] | 109 [AA] | 1676891-1677220 | fliE | Flagellar hook-basal body complex protein FliE |
| 1549 | SEQF10123.1_CP051292.1 | SEQF10123.1_01602 | open | 486 [NA] | 161 [AA] | 1677347-1677832 | flgC | Flagellar basal-body rod protein FlgC |
| 1550 | SEQF10123.1_CP051292.1 | SEQF10123.1_01603 | open | 423 [NA] | 140 [AA] | 1677846-1678268 | flgB | Flagellar basal body rod protein FlgB |
| 1551 | SEQF10123.1_CP051292.1 | SEQF10123.1_01604 | open | 1167 [NA] | 388 [AA] | 1678474-1679640 | ftsW | putative peptidoglycan glycosyltransferase FtsW |
| 1552 | SEQF10123.1_CP051292.1 | SEQF10123.1_01605 | open | 1011 [NA] | 336 [AA] | 1679660-1680670 | hypothetical protein | |
| 1553 | SEQF10123.1_CP051292.1 | SEQF10123.1_01606 | open | 1002 [NA] | 333 [AA] | 1680884-1681885 | hypothetical protein | |
| 1554 | SEQF10123.1_CP051292.1 | SEQF10123.1_01607 | open | 597 [NA] | 198 [AA] | 1682124-1682720 | ahpC | Alkyl hydroperoxide reductase C |
| 1555 | SEQF10123.1_CP051292.1 | SEQF10123.1_01608 | open | 816 [NA] | 271 [AA] | 1682865-1683680 | metQ | D-methionine-binding lipoprotein MetQ |
| 1556 | SEQF10123.1_CP051292.1 | SEQF10123.1_01609 | open | 1767 [NA] | 588 [AA] | 1684177-1685943 | mrdA | Peptidoglycan D%2CD-transpeptidase MrdA |
| 1557 | SEQF10123.1_CP051292.1 | SEQF10123.1_01610 | open | 444 [NA] | 147 [AA] | 1685924-1686367 | hypothetical protein | |
| 1558 | SEQF10123.1_CP051292.1 | SEQF10123.1_01611 | open | 627 [NA] | 208 [AA] | 1686377-1687003 | engB | GTP-binding protein EngB |
| 1559 | SEQF10123.1_CP051292.1 | SEQF10123.1_01612 | open | 558 [NA] | 185 [AA] | 1687000-1687557 | lptA | Lipopolysaccharide export system protein LptA |
| 1560 | SEQF10123.1_CP051292.1 | SEQF10123.1_01613 | open | 594 [NA] | 197 [AA] | 1687557-1688150 | hypothetical protein | |
| 1561 | SEQF10123.1_CP051292.1 | SEQF10123.1_01614 | open | 495 [NA] | 164 [AA] | 1688125-1688619 | kdsC | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC |
| 1562 | SEQF10123.1_CP051292.1 | SEQF10123.1_01615 | open | 945 [NA] | 314 [AA] | 1688616-1689560 | rlpA | Endolytic peptidoglycan transglycosylase RlpA |
| 1563 | SEQF10123.1_CP051292.1 | SEQF10123.1_01616 | open | 1113 [NA] | 370 [AA] | 1689560-1690672 | hypothetical protein | |
| 1564 | SEQF10123.1_CP051292.1 | SEQF10123.1_01617 | open | 765 [NA] | 254 [AA] | 1690765-1691529 | ycfH | putative metal-dependent hydrolase YcfH |
| 1565 | SEQF10123.1_CP051292.1 | SEQF10123.1_01618 | open | 621 [NA] | 206 [AA] | 1691605-1692225 | ribE | Riboflavin synthase |
| 1566 | SEQF10123.1_CP051292.1 | SEQF10123.1_01619 | open | 273 [NA] | 90 [AA] | 1692226-1692498 | hypothetical protein | |
| 1567 | SEQF10123.1_CP051292.1 | SEQF10123.1_01620 | open | 984 [NA] | 327 [AA] | 1692517-1693500 | metN | Methionine import ATP-binding protein MetN |
| 1568 | SEQF10123.1_CP051292.1 | SEQF10123.1_01621 | open | 648 [NA] | 215 [AA] | 1693502-1694149 | metI | D-methionine transport system permease protein MetI |
| 1569 | SEQF10123.1_CP051292.1 | SEQF10123.1_01622 | open | 432 [NA] | 143 [AA] | 1694340-1694771 | hypothetical protein | |
| 1570 | SEQF10123.1_CP051292.1 | SEQF10123.1_01623 | open | 597 [NA] | 198 [AA] | 1694781-1695377 | hypothetical protein | |
| 1571 | SEQF10123.1_CP051292.1 | SEQF10123.1_01624 | open | 936 [NA] | 311 [AA] | 1695377-1696312 | wecA | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase |
| 1572 | SEQF10123.1_CP051292.1 | SEQF10123.1_01625 | open | 789 [NA] | 262 [AA] | 1696524-1697312 | pdxJ | Pyridoxine 5-phosphate synthase |
| 1573 | SEQF10123.1_CP051292.1 | SEQF10123.1_01626 | open | 924 [NA] | 307 [AA] | 1697314-1698237 | pdxA | 4-hydroxythreonine-4-phosphate dehydrogenase |
| 1574 | SEQF10123.1_CP051292.1 | SEQF10123.1_01627 | open | 1023 [NA] | 340 [AA] | 1698456-1699478 | tsaD | tRNA N6-adenosine threonylcarbamoyltransferase |
| 1575 | SEQF10123.1_CP051292.1 | SEQF10123.1_01628 | open | 789 [NA] | 262 [AA] | 1700220-1701008 | flgG_2 | Flagellar basal-body rod protein FlgG |
| 1576 | SEQF10123.1_CP051292.1 | SEQF10123.1_01629 | open | 738 [NA] | 245 [AA] | 1701119-1701856 | hypothetical protein | |
| 1577 | SEQF10123.1_CP051292.1 | SEQF10123.1_01630 | open | 144 [NA] | 47 [AA] | 1702211-1702354 | hypothetical protein | |
| 1578 | SEQF10123.1_CP051292.1 | SEQF10123.1_01631 | open | 141 [NA] | 46 [AA] | 1702389-1702529 | hypothetical protein | |
| 1579 | SEQF10123.1_CP051292.1 | SEQF10123.1_01632 | open | 762 [NA] | 253 [AA] | 1702615-1703376 | hypothetical protein | |
| 1580 | SEQF10123.1_CP051292.1 | SEQF10123.1_01633 | open | 234 [NA] | 77 [AA] | 1703741-1703974 | hypothetical protein |