Genome Explorer: Helicobacter pylori 19-C-EK1 (SEQF10143.1)
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PROKKA Annotation for SEQF10143.1
| Genome selected: Helicobacter pylori 19-C-EK1 | |||
| Contigs: | 1 | Bases: | 1709363 bps |
| CDS: | 1603 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 36 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1501 | SEQF10143.1_CP032480.1 | SEQF10143.1_01546 | open | 1278 [NA] | 425 [AA] | 1597689-1598966 | icd | Isocitrate dehydrogenase [NADP] |
| 1502 | SEQF10143.1_CP032480.1 | SEQF10143.1_01547 | open | 1281 [NA] | 426 [AA] | 1599167-1600447 | gltA | Citrate synthase |
| 1503 | SEQF10143.1_CP032480.1 | SEQF10143.1_01548 | open | 546 [NA] | 181 [AA] | 1600993-1601538 | hypothetical protein | |
| 1504 | SEQF10143.1_CP032480.1 | SEQF10143.1_01549 | open | 1545 [NA] | 514 [AA] | 1601513-1603057 | hypothetical protein | |
| 1505 | SEQF10143.1_CP032480.1 | SEQF10143.1_01550 | open | 1572 [NA] | 523 [AA] | 1603637-1605208 | eptA | Phosphoethanolamine transferase EptA |
| 1506 | SEQF10143.1_CP032480.1 | SEQF10143.1_01551 | open | 573 [NA] | 190 [AA] | 1605219-1605791 | lpxE | Lipid A 1-phosphatase |
| 1507 | SEQF10143.1_CP032480.1 | SEQF10143.1_01552 | open | 1218 [NA] | 405 [AA] | 1605814-1607031 | nspC | Carboxynorspermidinecarboxyspermidine decarboxylase |
| 1508 | SEQF10143.1_CP032480.1 | SEQF10143.1_01553 | open | 966 [NA] | 321 [AA] | 1607028-1607993 | cheV_3 | Chemotaxis protein CheV |
| 1509 | SEQF10143.1_CP032480.1 | SEQF10143.1_01554 | open | 1341 [NA] | 446 [AA] | 1608101-1609441 | hypothetical protein | |
| 1510 | SEQF10143.1_CP032480.1 | SEQF10143.1_01556 | open | 2364 [NA] | 787 [AA] | 1609748-1612111 | virB4_2 | Type IV secretion system protein virB4 |
| 1511 | SEQF10143.1_CP032480.1 | SEQF10143.1_01557 | open | 264 [NA] | 87 [AA] | 1612113-1612376 | hypothetical protein | |
| 1512 | SEQF10143.1_CP032480.1 | SEQF10143.1_01558 | open | 282 [NA] | 93 [AA] | 1612376-1612657 | hypothetical protein | |
| 1513 | SEQF10143.1_CP032480.1 | SEQF10143.1_01559 | open | 828 [NA] | 275 [AA] | 1612803-1613630 | hypothetical protein | |
| 1514 | SEQF10143.1_CP032480.1 | SEQF10143.1_01560 | open | 1053 [NA] | 350 [AA] | 1613723-1614775 | mnmA_2 | tRNA-specific 2-thiouridylase MnmA |
| 1515 | SEQF10143.1_CP032480.1 | SEQF10143.1_01561 | open | 1680 [NA] | 559 [AA] | 1614772-1616451 | dnaG | DNA primase |
| 1516 | SEQF10143.1_CP032480.1 | SEQF10143.1_01562 | open | 357 [NA] | 118 [AA] | 1616740-1617096 | groS | 10 kDa chaperonin |
| 1517 | SEQF10143.1_CP032480.1 | SEQF10143.1_01563 | open | 1641 [NA] | 546 [AA] | 1617121-1618761 | groL | 60 kDa chaperonin |
| 1518 | SEQF10143.1_CP032480.1 | SEQF10143.1_01564 | open | 2067 [NA] | 688 [AA] | 1619021-1621087 | hypothetical protein | |
| 1519 | SEQF10143.1_CP032480.1 | SEQF10143.1_01570 | open | 831 [NA] | 276 [AA] | 1622057-1622887 | panC | Pantothenate synthetase |
| 1520 | SEQF10143.1_CP032480.1 | SEQF10143.1_01571 | open | 684 [NA] | 227 [AA] | 1622888-1623571 | pyrF | Orotidine 5-phosphate decarboxylase |
| 1521 | SEQF10143.1_CP032480.1 | SEQF10143.1_01572 | open | 666 [NA] | 221 [AA] | 1623693-1624358 | cynT | Carbonic anhydrase 1 |
| 1522 | SEQF10143.1_CP032480.1 | SEQF10143.1_01573 | open | 831 [NA] | 276 [AA] | 1624345-1625175 | kdsA | 2-dehydro-3-deoxyphosphooctonate aldolase |
| 1523 | SEQF10143.1_CP032480.1 | SEQF10143.1_01574 | open | 471 [NA] | 156 [AA] | 1625185-1625655 | ribH | 6%2C7-dimethyl-8-ribityllumazine synthase |
| 1524 | SEQF10143.1_CP032480.1 | SEQF10143.1_01575 | open | 417 [NA] | 138 [AA] | 1625657-1626073 | nusB | Transcription antitermination protein NusB |
| 1525 | SEQF10143.1_CP032480.1 | SEQF10143.1_01576 | open | 369 [NA] | 122 [AA] | 1626408-1626776 | hypothetical protein | |
| 1526 | SEQF10143.1_CP032480.1 | SEQF10143.1_01577 | open | 762 [NA] | 253 [AA] | 1627023-1627784 | hypothetical protein | |
| 1527 | SEQF10143.1_CP032480.1 | SEQF10143.1_01578 | open | 141 [NA] | 46 [AA] | 1627869-1628009 | hypothetical protein | |
| 1528 | SEQF10143.1_CP032480.1 | SEQF10143.1_01579 | open | 402 [NA] | 133 [AA] | 1628498-1628899 | hypothetical protein | |
| 1529 | SEQF10143.1_CP032480.1 | SEQF10143.1_01580 | open | 789 [NA] | 262 [AA] | 1629352-1630140 | flgG_2 | Flagellar basal-body rod protein FlgG |
| 1530 | SEQF10143.1_CP032480.1 | SEQF10143.1_01581 | open | 1023 [NA] | 340 [AA] | 1630319-1631341 | tsaD | tRNA N6-adenosine threonylcarbamoyltransferase |
| 1531 | SEQF10143.1_CP032480.1 | SEQF10143.1_01582 | open | 924 [NA] | 307 [AA] | 1631559-1632482 | pdxA | 4-hydroxythreonine-4-phosphate dehydrogenase |
| 1532 | SEQF10143.1_CP032480.1 | SEQF10143.1_01583 | open | 789 [NA] | 262 [AA] | 1632484-1633272 | pdxJ | Pyridoxine 5-phosphate synthase |
| 1533 | SEQF10143.1_CP032480.1 | SEQF10143.1_01584 | open | 939 [NA] | 312 [AA] | 1633480-1634418 | wecA | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase |
| 1534 | SEQF10143.1_CP032480.1 | SEQF10143.1_01585 | open | 597 [NA] | 198 [AA] | 1634415-1635011 | hypothetical protein | |
| 1535 | SEQF10143.1_CP032480.1 | SEQF10143.1_01586 | open | 432 [NA] | 143 [AA] | 1635021-1635452 | hypothetical protein | |
| 1536 | SEQF10143.1_CP032480.1 | SEQF10143.1_01587 | open | 648 [NA] | 215 [AA] | 1635640-1636287 | metI | D-methionine transport system permease protein MetI |
| 1537 | SEQF10143.1_CP032480.1 | SEQF10143.1_01588 | open | 984 [NA] | 327 [AA] | 1636289-1637272 | metN | Methionine import ATP-binding protein MetN |
| 1538 | SEQF10143.1_CP032480.1 | SEQF10143.1_01589 | open | 273 [NA] | 90 [AA] | 1637294-1637566 | hypothetical protein | |
| 1539 | SEQF10143.1_CP032480.1 | SEQF10143.1_01590 | open | 621 [NA] | 206 [AA] | 1637567-1638187 | ribE | Riboflavin synthase |
| 1540 | SEQF10143.1_CP032480.1 | SEQF10143.1_01591 | open | 765 [NA] | 254 [AA] | 1638262-1639026 | ycfH | putative metal-dependent hydrolase YcfH |
| 1541 | SEQF10143.1_CP032480.1 | SEQF10143.1_01592 | open | 1119 [NA] | 372 [AA] | 1639114-1640232 | hypothetical protein | |
| 1542 | SEQF10143.1_CP032480.1 | SEQF10143.1_01593 | open | 945 [NA] | 314 [AA] | 1640232-1641176 | rlpA | Endolytic peptidoglycan transglycosylase RlpA |
| 1543 | SEQF10143.1_CP032480.1 | SEQF10143.1_01594 | open | 495 [NA] | 164 [AA] | 1641173-1641667 | kdsC | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC |
| 1544 | SEQF10143.1_CP032480.1 | SEQF10143.1_01595 | open | 594 [NA] | 197 [AA] | 1641642-1642235 | hypothetical protein | |
| 1545 | SEQF10143.1_CP032480.1 | SEQF10143.1_01596 | open | 552 [NA] | 183 [AA] | 1642235-1642786 | lptA | Lipopolysaccharide export system protein LptA |
| 1546 | SEQF10143.1_CP032480.1 | SEQF10143.1_01597 | open | 627 [NA] | 208 [AA] | 1642783-1643409 | engB | GTP-binding protein EngB |
| 1547 | SEQF10143.1_CP032480.1 | SEQF10143.1_01598 | open | 444 [NA] | 147 [AA] | 1643422-1643865 | hypothetical protein | |
| 1548 | SEQF10143.1_CP032480.1 | SEQF10143.1_01599 | open | 1767 [NA] | 588 [AA] | 1643846-1645612 | mrdA | Peptidoglycan D%2CD-transpeptidase MrdA |
| 1549 | SEQF10143.1_CP032480.1 | SEQF10143.1_01600 | open | 816 [NA] | 271 [AA] | 1646101-1646916 | metQ | D-methionine-binding lipoprotein MetQ |
| 1550 | SEQF10143.1_CP032480.1 | SEQF10143.1_01601 | open | 597 [NA] | 198 [AA] | 1647064-1647660 | ahpC | Alkyl hydroperoxide reductase C |
| 1551 | SEQF10143.1_CP032480.1 | SEQF10143.1_01602 | open | 1002 [NA] | 333 [AA] | 1647900-1648901 | hypothetical protein | |
| 1552 | SEQF10143.1_CP032480.1 | SEQF10143.1_01603 | open | 1008 [NA] | 335 [AA] | 1649109-1650116 | hypothetical protein | |
| 1553 | SEQF10143.1_CP032480.1 | SEQF10143.1_01604 | open | 1167 [NA] | 388 [AA] | 1650139-1651305 | ftsW | putative peptidoglycan glycosyltransferase FtsW |
| 1554 | SEQF10143.1_CP032480.1 | SEQF10143.1_01605 | open | 423 [NA] | 140 [AA] | 1651510-1651932 | flgB | Flagellar basal body rod protein FlgB |
| 1555 | SEQF10143.1_CP032480.1 | SEQF10143.1_01606 | open | 486 [NA] | 161 [AA] | 1651945-1652430 | flgC | Flagellar basal-body rod protein FlgC |
| 1556 | SEQF10143.1_CP032480.1 | SEQF10143.1_01607 | open | 330 [NA] | 109 [AA] | 1652559-1652888 | fliE | Flagellar hook-basal body complex protein FliE |
| 1557 | SEQF10143.1_CP032480.1 | SEQF10143.1_01608 | open | 1848 [NA] | 615 [AA] | 1653044-1654891 | ftsI | Peptidoglycan D%2CD-transpeptidase FtsI |
| 1558 | SEQF10143.1_CP032480.1 | SEQF10143.1_01609 | open | 1101 [NA] | 366 [AA] | 1655214-1656314 | ATPGTP phosphatase | |
| 1559 | SEQF10143.1_CP032480.1 | SEQF10143.1_01610 | open | 699 [NA] | 232 [AA] | 1656314-1657012 | hypothetical protein | |
| 1560 | SEQF10143.1_CP032480.1 | SEQF10143.1_01611 | open | 624 [NA] | 207 [AA] | 1657029-1657652 | cptA_1 | Phosphoethanolamine transferase CptA |
| 1561 | SEQF10143.1_CP032480.1 | SEQF10143.1_01612 | open | 1098 [NA] | 365 [AA] | 1657594-1658691 | cptA_2 | Phosphoethanolamine transferase CptA |
| 1562 | SEQF10143.1_CP032480.1 | SEQF10143.1_01613 | open | 858 [NA] | 285 [AA] | 1658835-1659692 | hypothetical protein | |
| 1563 | SEQF10143.1_CP032480.1 | SEQF10143.1_01614 | open | 1239 [NA] | 412 [AA] | 1659689-1660927 | petB | Cytochrome b |
| 1564 | SEQF10143.1_CP032480.1 | SEQF10143.1_01615 | open | 504 [NA] | 167 [AA] | 1660938-1661441 | petA | Ubiquinol-cytochrome c reductase iron-sulfur subunit |
| 1565 | SEQF10143.1_CP032480.1 | SEQF10143.1_01616 | open | 3000 [NA] | 999 [AA] | 1661566-1664565 | mfd | Transcription-repair-coupling factor |
| 1566 | SEQF10143.1_CP032480.1 | SEQF10143.1_01617 | open | 315 [NA] | 104 [AA] | 1664569-1664883 | hypothetical protein | |
| 1567 | SEQF10143.1_CP032480.1 | SEQF10143.1_01618 | open | 939 [NA] | 312 [AA] | 1664898-1665836 | hypothetical protein | |
| 1568 | SEQF10143.1_CP032480.1 | SEQF10143.1_01619 | open | 927 [NA] | 308 [AA] | 1665845-1666771 | hypothetical protein | |
| 1569 | SEQF10143.1_CP032480.1 | SEQF10143.1_01620 | open | 1176 [NA] | 391 [AA] | 1666771-1667946 | folC | Dihydrofolate synthasefolylpolyglutamate synthase |
| 1570 | SEQF10143.1_CP032480.1 | SEQF10143.1_01621 | open | 513 [NA] | 170 [AA] | 1667936-1668448 | hypothetical protein | |
| 1571 | SEQF10143.1_CP032480.1 | SEQF10143.1_01622 | open | 2421 [NA] | 806 [AA] | 1668445-1670865 | leuS | Leucine--tRNA ligase |
| 1572 | SEQF10143.1_CP032480.1 | SEQF10143.1_01623 | open | 339 [NA] | 112 [AA] | 1670875-1671213 | hypothetical protein | |
| 1573 | SEQF10143.1_CP032480.1 | SEQF10143.1_01624 | open | 972 [NA] | 323 [AA] | 1671223-1672194 | secF | Protein translocase subunit SecF |
| 1574 | SEQF10143.1_CP032480.1 | SEQF10143.1_01625 | open | 1578 [NA] | 525 [AA] | 1672203-1673780 | secD | Protein translocase subunit SecD |
| 1575 | SEQF10143.1_CP032480.1 | SEQF10143.1_01626 | open | 384 [NA] | 127 [AA] | 1673777-1674160 | hypothetical protein | |
| 1576 | SEQF10143.1_CP032480.1 | SEQF10143.1_01627 | open | 1317 [NA] | 438 [AA] | 1674208-1675524 | nhaA | Na(+)H(+) antiporter NhaA |
| 1577 | SEQF10143.1_CP032480.1 | SEQF10143.1_01628 | open | 2856 [NA] | 951 [AA] | 1675548-1678403 | recB | RecBCD enzyme subunit RecB |
| 1578 | SEQF10143.1_CP032480.1 | SEQF10143.1_01629 | open | 795 [NA] | 264 [AA] | 1678654-1679448 | rpsB | 30S ribosomal protein S2 |
| 1579 | SEQF10143.1_CP032480.1 | SEQF10143.1_01630 | open | 1068 [NA] | 355 [AA] | 1679448-1680515 | tsf | Elongation factor Ts |
| 1580 | SEQF10143.1_CP032480.1 | SEQF10143.1_01631 | open | 732 [NA] | 243 [AA] | 1680663-1681394 | hypothetical protein | |
| 1581 | SEQF10143.1_CP032480.1 | SEQF10143.1_01632 | open | 897 [NA] | 298 [AA] | 1681387-1682283 | hypothetical protein | |
| 1582 | SEQF10143.1_CP032480.1 | SEQF10143.1_01633 | open | 204 [NA] | 67 [AA] | 1682296-1682499 | hypothetical protein | |
| 1583 | SEQF10143.1_CP032480.1 | SEQF10143.1_01634 | open | 873 [NA] | 290 [AA] | 1682499-1683371 | fbp | Fructose-1%2C6-bisphosphatase class 1 |
| 1584 | SEQF10143.1_CP032480.1 | SEQF10143.1_01635 | open | 654 [NA] | 217 [AA] | 1683442-1684095 | rpe | Ribulose-phosphate 3-epimerase |
| 1585 | SEQF10143.1_CP032480.1 | SEQF10143.1_01636 | open | 864 [NA] | 287 [AA] | 1684073-1684936 | dinG | 3-5 exonuclease DinG |
| 1586 | SEQF10143.1_CP032480.1 | SEQF10143.1_01637 | open | 978 [NA] | 325 [AA] | 1684976-1685953 | hcpC_3 | Putative beta-lactamase HcpC |
| 1587 | SEQF10143.1_CP032480.1 | SEQF10143.1_01638 | open | 297 [NA] | 98 [AA] | 1686091-1686387 | hypothetical protein | |
| 1588 | SEQF10143.1_CP032480.1 | SEQF10143.1_01639 | open | 1308 [NA] | 435 [AA] | 1686407-1687714 | hypothetical protein | |
| 1589 | SEQF10143.1_CP032480.1 | SEQF10143.1_01640 | open | 1575 [NA] | 524 [AA] | 1687711-1689285 | recN | DNA repair protein RecN |
| 1590 | SEQF10143.1_CP032480.1 | SEQF10143.1_01641 | open | 855 [NA] | 284 [AA] | 1689299-1690153 | nadK | NAD kinase |
| 1591 | SEQF10143.1_CP032480.1 | SEQF10143.1_01642 | open | 729 [NA] | 242 [AA] | 1690340-1691068 | hypothetical protein | |
| 1592 | SEQF10143.1_CP032480.1 | SEQF10143.1_01643 | open | 1707 [NA] | 568 [AA] | 1691079-1692785 | hypothetical protein | |
| 1593 | SEQF10143.1_CP032480.1 | SEQF10143.1_01644 | open | 1143 [NA] | 380 [AA] | 1692909-1694051 | ald | Alanine dehydrogenase |
| 1594 | SEQF10143.1_CP032480.1 | SEQF10143.1_01645 | open | 969 [NA] | 322 [AA] | 1694254-1695222 | rocF | Arginase |
| 1595 | SEQF10143.1_CP032480.1 | SEQF10143.1_01646 | open | 2526 [NA] | 841 [AA] | 1695577-1698102 | btuB_4 | Vitamin B12 transporter BtuB |
| 1596 | SEQF10143.1_CP032480.1 | SEQF10143.1_01647 | open | 708 [NA] | 235 [AA] | 1698192-1698899 | hypothetical protein | |
| 1597 | SEQF10143.1_CP032480.1 | SEQF10143.1_01648 | open | 2901 [NA] | 966 [AA] | 1698973-1701873 | hypothetical protein | |
| 1598 | SEQF10143.1_CP032480.1 | SEQF10143.1_01649 | open | 2451 [NA] | 816 [AA] | 1701943-1704393 | hypothetical protein | |
| 1599 | SEQF10143.1_CP032480.1 | SEQF10143.1_01650 | open | 1197 [NA] | 398 [AA] | 1704401-1705597 | hypothetical protein | |
| 1600 | SEQF10143.1_CP032480.1 | SEQF10143.1_01651 | open | 627 [NA] | 208 [AA] | 1705943-1706569 | thyX | Flavin-dependent thymidylate synthase |
| 1601 | SEQF10143.1_CP032480.1 | SEQF10143.1_01652 | open | 1794 [NA] | 597 [AA] | 1706591-1708384 | glmS | Glutamine--fructose-6-phosphate aminotransferase [isomerizing] |
| 1602 | SEQF10143.1_CP032480.1 | SEQF10143.1_01653 | open | 240 [NA] | 79 [AA] | 1708385-1708624 | putative protein | |
| 1603 | SEQF10143.1_CP032480.1 | SEQF10143.1_01654 | open | 543 [NA] | 180 [AA] | 1708667-1709209 | mqnB | Futalosine hydrolase |