Genome Explorer: Treponema pallidum subsp. pertenue str. CDC2 (SEQF1328.1)
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NCBI Annotation for SEQF1328.1
| Genome selected: Treponema pallidum subsp. pertenue str. CDC2 | |||
| Contigs: | 1 | Bases: | 1139744 bps |
| CDS: | 1068 | rRNA: | 6 |
| tmRNA: | 1 | tRNA: | 45 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1001 | CP002375.1 | AEZ59186.1 JB | 774 [NA] | 257 [AA] | 1064347-1065120 | TPECDC2_0979 | magnesium (Mg2+)-dependent deoxyribonuclease |
| 1002 | CP002375.1 | AEZ59187.1 JB | 1023 [NA] | 340 [AA] | 1065128-1066150 | TPECDC2_0980 | tRNA-dihydrouridine synthase |
| 1003 | CP002375.1 | AEZ59188.1 JB | 237 [NA] | 78 [AA] | 1066072-1066308 | TPECDC2_0980a | hypothetical protein |
| 1004 | CP002375.1 | AEZ59189.1 JB | 1164 [NA] | 387 [AA] | 1066210-1067373 | TPECDC2_0981 | GGDEF domain protein |
| 1005 | CP002375.1 | AEZ59190.1 JB | 627 [NA] | 208 [AA] | 1067389-1068015 | TPECDC2_0982 | rhomboid family protein |
| 1006 | CP002375.1 | AEZ59191.1 JB | 717 [NA] | 238 [AA] | 1068005-1068721 | TPECDC2_0983 | hypothetical protein |
| 1007 | CP002375.1 | AEZ59192.1 JB | 1920 [NA] | 639 [AA] | 1068745-1070664 | TPECDC2_0984 | chaperone HtpG |
| 1008 | CP002375.1 | AEZ59193.1 JB | 315 [NA] | 104 [AA] | 1070634-1070948 | TPECDC2_0984a | hypothetical protein |
| 1009 | CP002375.1 | AEZ59194.1 JB | 1770 [NA] | 589 [AA] | 1070847-1072616 | TPECDC2_0985 | aspartate--tRNA ligase |
| 1010 | CP002375.1 | AEZ59195.1 JB | 885 [NA] | 294 [AA] | 1072673-1073557 | TPECDC2_0986 | DMT superfamily drug/metabolite transporter |
| 1011 | CP002375.1 | AEZ59196.1 JB | 423 [NA] | 140 [AA] | 1073603-1074025 | TPECDC2_0987 | hypothetical protein |
| 1012 | CP002375.1 | AEZ59197.1 JB | 600 [NA] | 199 [AA] | 1074077-1074676 | TPECDC2_0988 | MarC family multiple antibiotic resistance transporter |
| 1013 | CP002375.1 | AEZ59198.1 JB | 873 [NA] | 290 [AA] | 1074712-1075584 | TPECDC2_0989 | hypothetical protein |
| 1014 | CP002375.1 | AEZ59199.1 JB | 234 [NA] | 77 [AA] | 1075391-1075624 | TPECDC2_0989a | hypothetical protein |
| 1015 | CP002375.1 | AEZ59200.1 JB | 3102 [NA] | 1033 [AA] | 1075631-1078732 | TPECDC2_0990 | conserved hypothetical outer membrane protein |
| 1016 | CP002375.1 | AEZ59201.1 JB | 159 [NA] | 52 [AA] | 1078796-1078954 | TPECDC2_0991 | rubredoxin |
| 1017 | CP002375.1 | AEZ59202.1 JB | 288 [NA] | 95 [AA] | 1078987-1079274 | TPECDC2_0992 | hypothetical protein |
| 1018 | CP002375.1 | AEZ59203.1 JB | 1026 [NA] | 341 [AA] | 1079343-1080368 | TPECDC2_0993 | putative rare lipoprotein A |
| 1019 | CP002375.1 | AEZ59204.1 JB | 297 [NA] | 98 [AA] | 1080562-1080858 | TPECDC2_0993a | hypothetical protein |
| 1020 | CP002375.1 | AEZ59205.1 JB | 810 [NA] | 269 [AA] | 1080724-1081533 | TPECDC2_0994 | magnesium (Mg2+)-dependent deoxyribonuclease |
| 1021 | CP002375.1 | AEZ59206.1 JB | 1335 [NA] | 444 [AA] | 1081615-1082949 | TPECDC2_0995 | putative CAP family transcription factor |
| 1022 | CP002375.1 | AEZ59207.1 JB | 1677 [NA] | 558 [AA] | 1082979-1084655 | TPECDC2_0996 | hypothetical protein |
| 1023 | CP002375.1 | AEZ59208.1 JB | 1809 [NA] | 602 [AA] | 1084752-1086560 | TPECDC2_0997 | signal peptide peptidase A |
| 1024 | CP002375.1 | AEZ59209.1 JB | 1389 [NA] | 462 [AA] | 1086582-1087970 | TPECDC2_0998 | sodium/alanine symporter family protein |
| 1025 | CP002375.1 | AEZ59210.1 JB | 2400 [NA] | 799 [AA] | 1088156-1090555 | TPECDC2_0999 | S-DNA-T family septal DNA translocator |
| 1026 | CP002375.1 | AEZ59211.1 JB | 672 [NA] | 223 [AA] | 1090733-1091404 | TPECDC2_1000 | hypothetical protein |
| 1027 | CP002375.1 | AEZ59212.1 JB | 1182 [NA] | 393 [AA] | 1091544-1092725 | TPECDC2_1001 | hypothetical protein |
| 1028 | CP002375.1 | AEZ59213.1 JB | 756 [NA] | 251 [AA] | 1092739-1093494 | TPECDC2_1002 | hypothetical protein |
| 1029 | CP002375.1 | AEZ59214.1 JB | 1038 [NA] | 345 [AA] | 1093602-1094639 | TPECDC2_1003 | putative membrane protein |
| 1030 | CP002375.1 | AEZ59215.1 JB | 606 [NA] | 201 [AA] | 1094662-1095267 | TPECDC2_1004 | recombination protein R |
| 1031 | CP002375.1 | AEZ59216.1 JB | 1719 [NA] | 572 [AA] | 1095341-1097059 | TPECDC2_1005 | DNA-directed DNA polymerase III gamma and tau subunits |
| 1032 | CP002375.1 | AEZ59217.1 JB | 1914 [NA] | 637 [AA] | 1097118-1099031 | TPECDC2_1006 | DNA topoisomerase (ATP-hydrolyzing) subunit B |
| 1033 | CP002375.1 | AEZ59218.1 JB | 918 [NA] | 305 [AA] | 1099140-1100057 | TPECDC2_1007 | thymidylate synthase (FAD) |
| 1034 | CP002375.1 | AEZ59219.1 JB | 2538 [NA] | 845 [AA] | 1100100-1102637 | TPECDC2_1008 | ribonucleotide-diphosphate reductase subunit alpha |
| 1035 | CP002375.1 | AEZ59220.1 JB | 1071 [NA] | 356 [AA] | 1102764-1103834 | TPECDC2_1009 | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) |
| 1036 | CP002375.1 | AEZ59221.1 JB | 450 [NA] | 149 [AA] | 1103931-1104380 | TPECDC2_1010 | nucleoside-diphosphate kinase |
| 1037 | CP002375.1 | AEZ59222.1 JB | 609 [NA] | 202 [AA] | 1104506-1105114 | TPECDC2_1011 | aminoacyl-tRNA hydrolase |
| 1038 | CP002375.1 | AEZ59223.1 JB | 936 [NA] | 311 [AA] | 1105149-1106084 | TPECDC2_1012 | DNA-directed RNA polymerase sigma subunit RpoD |
| 1039 | CP002375.1 | AEZ59224.1 JB | 267 [NA] | 88 [AA] | 1106289-1106555 | TPECDC2_1013 | chaperone GroES |
| 1040 | CP002375.1 | AEZ59225.1 JB | 1917 [NA] | 638 [AA] | 1106566-1108482 | TPECDC2_1014 | hypothetical protein |
| 1041 | CP002375.1 | AEZ59226.1 JB | 426 [NA] | 141 [AA] | 1108466-1108891 | TPECDC2_1015 | transcription antitermination protein NusB |
| 1042 | CP002375.1 | AEZ59227.1 JB | 1086 [NA] | 361 [AA] | 1108888-1109973 | TPECDC2_1016 | putative peptidylprolyl isomerase |
| 1043 | CP002375.1 | AEZ59228.1 JB | 1818 [NA] | 605 [AA] | 1110046-1111863 | TPECDC2_1017 | alanine--tRNA ligase |
| 1044 | CP002375.1 | AEZ59229.1 JB | 192 [NA] | 63 [AA] | 1111908-1112099 | TPECDC2_1017a | hypothetical protein |
| 1045 | CP002375.1 | AEZ59230.1 JB | 1515 [NA] | 504 [AA] | 1112035-1113549 | TPECDC2_1018 | hypothetical protein |
| 1046 | CP002375.1 | AEZ59231.1 JB | 444 [NA] | 147 [AA] | 1113571-1114014 | TPECDC2_1019 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C |
| 1047 | CP002375.1 | AEZ59232.1 JB | 1521 [NA] | 506 [AA] | 1114015-1115535 | TPECDC2_1020 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A |
| 1048 | CP002375.1 | AEZ59233.1 JB | 1530 [NA] | 509 [AA] | 1115528-1117057 | TPECDC2_1021 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B |
| 1049 | CP002375.1 | AEZ59234.1 JB | 1368 [NA] | 455 [AA] | 1117153-1118520 | TPECDC2_1022 | DNA repair protein Sms |
| 1050 | CP002375.1 | AEZ59235.1 JB | 669 [NA] | 222 [AA] | 1118567-1119235 | TPECDC2_1023 | recombination regulator RecX |
| 1051 | CP002375.1 | AEZ59236.1 JB | 390 [NA] | 129 [AA] | 1119189-1119578 | TPECDC2_1024 | ribosomal protein S9 |
| 1052 | CP002375.1 | AEZ59237.1 JB | 429 [NA] | 142 [AA] | 1119594-1120022 | TPECDC2_1025 | ribosomal protein L13 |
| 1053 | CP002375.1 | AEZ59238.1 JB | 423 [NA] | 140 [AA] | 1119975-1120397 | TPECDC2_1025a | hypothetical protein |
| 1054 | CP002375.1 | AEZ59239.1 JB | 1770 [NA] | 589 [AA] | 1120455-1122224 | TPECDC2_1026 | putative oligoendopeptidase F |
| 1055 | CP002375.1 | AEZ59240.1 JB | 777 [NA] | 258 [AA] | 1122347-1123123 | TPECDC2_1027 | uridine phosphorylase |
| 1056 | CP002375.1 | AEZ59241.1 JB | 2013 [NA] | 670 [AA] | 1123139-1125151 | TPECDC2_1028 | excision endonuclease subunit UvrD |
| 1057 | CP002375.1 | AEZ59242.1 JB | 687 [NA] | 228 [AA] | 1125234-1125920 | TPECDC2_1029 | DbpA RNA binding domain protein |
| 1058 | CP002375.1 | AEZ59243.1 JB | 1671 [NA] | 556 [AA] | 1125961-1127631 | TPECDC2_1031 | Tpr protein L |
| 1059 | CP002375.1 | AEZ59244.1 JB | 435 [NA] | 144 [AA] | 1127699-1128133 | TPECDC2_1032 | hypothetical protein |
| 1060 | CP002375.1 | AEZ59245.1 JB | 936 [NA] | 311 [AA] | 1128145-1129080 | TPECDC2_1033 | patatin family phospholipase |
| 1061 | CP002375.1 | AEZ59246.1 JB | 1026 [NA] | 341 [AA] | 1129154-1130179 | TPECDC2_1034 | CaCA family calcium (Ca2+):cation antiporter |
| 1062 | CP002375.1 | AEZ59247.1 JB | 2871 [NA] | 956 [AA] | 1130176-1133046 | TPECDC2_1035 | valine--tRNA ligase |
| 1063 | CP002375.1 | AEZ59248.1 JB | 2379 [NA] | 792 [AA] | 1133199-1135577 | TPECDC2_1036 | P-ATPase superfamily P-type ATPase transporter |
| 1064 | CP002375.1 | AEZ59249.1 JB | 717 [NA] | 238 [AA] | 1135667-1136383 | TPECDC2_1037 | putative hemolysin III |
| 1065 | CP002375.1 | AEZ59250.1 JB | 534 [NA] | 177 [AA] | 1136542-1137075 | TPECDC2_1038 | bacterioferrin |
| 1066 | CP002375.1 | AEZ59251.1 JB | 573 [NA] | 190 [AA] | 1137302-1137874 | TPECDC2_1039 | adenine phosphoribosyltransferase |
| 1067 | CP002375.1 | AEZ59252.1 JB | 1056 [NA] | 351 [AA] | 1137897-1138952 | TPECDC2_1040 | lysine--tRNA ligase |
| 1068 | CP002375.1 | AEZ59253.1 JB | 600 [NA] | 199 [AA] | 1138952-1139551 | TPECDC2_1041 | S14 family endopeptidase ClpP |