Genome Explorer: Treponema pallidum SamoaD (SEQF1350.1)
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NCBI Annotation for SEQF1350.1
| Genome selected: Treponema pallidum SamoaD | |||
| Contigs: | 1 | Bases: | 1139330 bps |
| CDS: | 1068 | rRNA: | 6 |
| tmRNA: | 1 | tRNA: | 45 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1001 | CP002374.1 | AEZ58118.1 JB | 774 [NA] | 257 [AA] | 1063933-1064706 | TPESAMD_0979 | magnesium (Mg2+)-dependent deoxyribonuclease |
| 1002 | CP002374.1 | AEZ58119.1 JB | 1023 [NA] | 340 [AA] | 1064714-1065736 | TPESAMD_0980 | tRNA-dihydrouridine synthase |
| 1003 | CP002374.1 | AEZ58120.1 JB | 237 [NA] | 78 [AA] | 1065658-1065894 | TPESAMD_0980a | hypothetical protein |
| 1004 | CP002374.1 | AEZ58121.1 JB | 1164 [NA] | 387 [AA] | 1065796-1066959 | TPESAMD_0981 | GGDEF domain protein |
| 1005 | CP002374.1 | AEZ58122.1 JB | 627 [NA] | 208 [AA] | 1066975-1067601 | TPESAMD_0982 | rhomboid family protein |
| 1006 | CP002374.1 | AEZ58123.1 JB | 717 [NA] | 238 [AA] | 1067591-1068307 | TPESAMD_0983 | hypothetical protein |
| 1007 | CP002374.1 | AEZ58124.1 JB | 1920 [NA] | 639 [AA] | 1068331-1070250 | TPESAMD_0984 | chaperone HtpG |
| 1008 | CP002374.1 | AEZ58125.1 JB | 315 [NA] | 104 [AA] | 1070220-1070534 | TPESAMD_0984a | hypothetical protein |
| 1009 | CP002374.1 | AEZ58126.1 JB | 1770 [NA] | 589 [AA] | 1070433-1072202 | TPESAMD_0985 | aspartate--tRNA ligase |
| 1010 | CP002374.1 | AEZ58127.1 JB | 885 [NA] | 294 [AA] | 1072259-1073143 | TPESAMD_0986 | DMT superfamily drug/metabolite transporter |
| 1011 | CP002374.1 | AEZ58128.1 JB | 423 [NA] | 140 [AA] | 1073189-1073611 | TPESAMD_0987 | hypothetical protein |
| 1012 | CP002374.1 | AEZ58129.1 JB | 600 [NA] | 199 [AA] | 1073663-1074262 | TPESAMD_0988 | MarC family multiple antibiotic resistance transporter |
| 1013 | CP002374.1 | AEZ58130.1 JB | 873 [NA] | 290 [AA] | 1074298-1075170 | TPESAMD_0989 | hypothetical protein |
| 1014 | CP002374.1 | AEZ58131.1 JB | 234 [NA] | 77 [AA] | 1074977-1075210 | TPESAMD_0989a | hypothetical protein |
| 1015 | CP002374.1 | AEZ58132.1 JB | 3102 [NA] | 1033 [AA] | 1075217-1078318 | TPESAMD_0990 | conserved hypothetical outer membrane protein |
| 1016 | CP002374.1 | AEZ58133.1 JB | 159 [NA] | 52 [AA] | 1078382-1078540 | TPESAMD_0991 | rubredoxin |
| 1017 | CP002374.1 | AEZ58134.1 JB | 288 [NA] | 95 [AA] | 1078573-1078860 | TPESAMD_0992 | hypothetical protein |
| 1018 | CP002374.1 | AEZ58135.1 JB | 1026 [NA] | 341 [AA] | 1078929-1079954 | TPESAMD_0993 | putative rare lipoprotein A |
| 1019 | CP002374.1 | AEZ58136.1 JB | 297 [NA] | 98 [AA] | 1080148-1080444 | TPESAMD_0993a | hypothetical protein |
| 1020 | CP002374.1 | AEZ58137.1 JB | 810 [NA] | 269 [AA] | 1080310-1081119 | TPESAMD_0994 | magnesium (Mg2+)-dependent deoxyribonuclease |
| 1021 | CP002374.1 | AEZ58138.1 JB | 1335 [NA] | 444 [AA] | 1081201-1082535 | TPESAMD_0995 | putative CAP family transcription factor |
| 1022 | CP002374.1 | AEZ58139.1 JB | 1677 [NA] | 558 [AA] | 1082565-1084241 | TPESAMD_0996 | hypothetical protein |
| 1023 | CP002374.1 | AEZ58140.1 JB | 1809 [NA] | 602 [AA] | 1084338-1086146 | TPESAMD_0997 | signal peptide peptidase A |
| 1024 | CP002374.1 | AEZ58141.1 JB | 1389 [NA] | 462 [AA] | 1086168-1087556 | TPESAMD_0998 | sodium/alanine symporter family protein |
| 1025 | CP002374.1 | AEZ58142.1 JB | 2400 [NA] | 799 [AA] | 1087742-1090141 | TPESAMD_0999 | S-DNA-T family septal DNA translocator |
| 1026 | CP002374.1 | AEZ58143.1 JB | 672 [NA] | 223 [AA] | 1090319-1090990 | TPESAMD_1000 | hypothetical protein |
| 1027 | CP002374.1 | AEZ58144.1 JB | 1182 [NA] | 393 [AA] | 1091130-1092311 | TPESAMD_1001 | hypothetical protein |
| 1028 | CP002374.1 | AEZ58145.1 JB | 756 [NA] | 251 [AA] | 1092325-1093080 | TPESAMD_1002 | hypothetical protein |
| 1029 | CP002374.1 | AEZ58146.1 JB | 1038 [NA] | 345 [AA] | 1093188-1094225 | TPESAMD_1003 | putative membrane protein |
| 1030 | CP002374.1 | AEZ58147.1 JB | 606 [NA] | 201 [AA] | 1094248-1094853 | TPESAMD_1004 | recombination protein R |
| 1031 | CP002374.1 | AEZ58148.1 JB | 1719 [NA] | 572 [AA] | 1094927-1096645 | TPESAMD_1005 | DNA-directed DNA polymerase III gamma and tau subunits |
| 1032 | CP002374.1 | AEZ58149.1 JB | 1914 [NA] | 637 [AA] | 1096704-1098617 | TPESAMD_1006 | DNA topoisomerase (ATP-hydrolyzing) subunit B |
| 1033 | CP002374.1 | AEZ58150.1 JB | 918 [NA] | 305 [AA] | 1098726-1099643 | TPESAMD_1007 | thymidylate synthase (FAD) |
| 1034 | CP002374.1 | AEZ58151.1 JB | 2538 [NA] | 845 [AA] | 1099686-1102223 | TPESAMD_1008 | ribonucleotide-diphosphate reductase subunit alpha |
| 1035 | CP002374.1 | AEZ58152.1 JB | 1071 [NA] | 356 [AA] | 1102350-1103420 | TPESAMD_1009 | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) |
| 1036 | CP002374.1 | AEZ58153.1 JB | 450 [NA] | 149 [AA] | 1103517-1103966 | TPESAMD_1010 | nucleoside-diphosphate kinase |
| 1037 | CP002374.1 | AEZ58154.1 JB | 609 [NA] | 202 [AA] | 1104092-1104700 | TPESAMD_1011 | aminoacyl-tRNA hydrolase |
| 1038 | CP002374.1 | AEZ58155.1 JB | 936 [NA] | 311 [AA] | 1104735-1105670 | TPESAMD_1012 | DNA-directed RNA polymerase sigma subunit RpoD |
| 1039 | CP002374.1 | AEZ58156.1 JB | 267 [NA] | 88 [AA] | 1105875-1106141 | TPESAMD_1013 | chaperone GroES |
| 1040 | CP002374.1 | AEZ58157.1 JB | 1917 [NA] | 638 [AA] | 1106152-1108068 | TPESAMD_1014 | hypothetical protein |
| 1041 | CP002374.1 | AEZ58158.1 JB | 426 [NA] | 141 [AA] | 1108052-1108477 | TPESAMD_1015 | transcription antitermination protein NusB |
| 1042 | CP002374.1 | AEZ58159.1 JB | 1086 [NA] | 361 [AA] | 1108474-1109559 | TPESAMD_1016 | putative peptidylprolyl isomerase |
| 1043 | CP002374.1 | AEZ58160.1 JB | 1818 [NA] | 605 [AA] | 1109632-1111449 | TPESAMD_1017 | alanine--tRNA ligase |
| 1044 | CP002374.1 | AEZ58161.1 JB | 192 [NA] | 63 [AA] | 1111494-1111685 | TPESAMD_1017a | hypothetical protein |
| 1045 | CP002374.1 | AEZ58162.1 JB | 1515 [NA] | 504 [AA] | 1111621-1113135 | TPESAMD_1018 | hypothetical protein |
| 1046 | CP002374.1 | AEZ58163.1 JB | 444 [NA] | 147 [AA] | 1113157-1113600 | TPESAMD_1019 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C |
| 1047 | CP002374.1 | AEZ58164.1 JB | 1521 [NA] | 506 [AA] | 1113601-1115121 | TPESAMD_1020 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A |
| 1048 | CP002374.1 | AEZ58165.1 JB | 1530 [NA] | 509 [AA] | 1115114-1116643 | TPESAMD_1021 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B |
| 1049 | CP002374.1 | AEZ58166.1 JB | 1368 [NA] | 455 [AA] | 1116739-1118106 | TPESAMD_1022 | DNA repair protein Sms |
| 1050 | CP002374.1 | AEZ58167.1 JB | 669 [NA] | 222 [AA] | 1118153-1118821 | TPESAMD_1023 | recombination regulator RecX |
| 1051 | CP002374.1 | AEZ58168.1 JB | 390 [NA] | 129 [AA] | 1118775-1119164 | TPESAMD_1024 | ribosomal protein S9 |
| 1052 | CP002374.1 | AEZ58169.1 JB | 429 [NA] | 142 [AA] | 1119180-1119608 | TPESAMD_1025 | ribosomal protein L13 |
| 1053 | CP002374.1 | AEZ58170.1 JB | 423 [NA] | 140 [AA] | 1119561-1119983 | TPESAMD_1025a | hypothetical protein |
| 1054 | CP002374.1 | AEZ58171.1 JB | 1770 [NA] | 589 [AA] | 1120041-1121810 | TPESAMD_1026 | putative oligoendopeptidase F |
| 1055 | CP002374.1 | AEZ58172.1 JB | 777 [NA] | 258 [AA] | 1121933-1122709 | TPESAMD_1027 | uridine phosphorylase |
| 1056 | CP002374.1 | AEZ58173.1 JB | 2013 [NA] | 670 [AA] | 1122725-1124737 | TPESAMD_1028 | excision endonuclease subunit UvrD |
| 1057 | CP002374.1 | AEZ58174.1 JB | 687 [NA] | 228 [AA] | 1124820-1125506 | TPESAMD_1029 | DbpA RNA binding domain protein |
| 1058 | CP002374.1 | AEZ58175.1 JB | 1671 [NA] | 556 [AA] | 1125547-1127217 | TPESAMD_1031 | Tpr protein L |
| 1059 | CP002374.1 | AEZ58176.1 JB | 435 [NA] | 144 [AA] | 1127285-1127719 | TPESAMD_1032 | hypothetical protein |
| 1060 | CP002374.1 | AEZ58177.1 JB | 936 [NA] | 311 [AA] | 1127731-1128666 | TPESAMD_1033 | patatin family phospholipase |
| 1061 | CP002374.1 | AEZ58178.1 JB | 1026 [NA] | 341 [AA] | 1128740-1129765 | TPESAMD_1034 | CaCA family calcium (Ca2+):cation antiporter |
| 1062 | CP002374.1 | AEZ58179.1 JB | 2871 [NA] | 956 [AA] | 1129762-1132632 | TPESAMD_1035 | valine--tRNA ligase |
| 1063 | CP002374.1 | AEZ58180.1 JB | 2379 [NA] | 792 [AA] | 1132785-1135163 | TPESAMD_1036 | P-ATPase superfamily P-type ATPase transporter |
| 1064 | CP002374.1 | AEZ58181.1 JB | 717 [NA] | 238 [AA] | 1135253-1135969 | TPESAMD_1037 | putative hemolysin III |
| 1065 | CP002374.1 | AEZ58182.1 JB | 534 [NA] | 177 [AA] | 1136128-1136661 | TPESAMD_1038 | bacterioferrin |
| 1066 | CP002374.1 | AEZ58183.1 JB | 573 [NA] | 190 [AA] | 1136888-1137460 | TPESAMD_1039 | adenine phosphoribosyltransferase |
| 1067 | CP002374.1 | AEZ58184.1 JB | 1056 [NA] | 351 [AA] | 1137483-1138538 | TPESAMD_1040 | lysine--tRNA ligase |
| 1068 | CP002374.1 | AEZ58185.1 JB | 600 [NA] | 199 [AA] | 1138538-1139137 | TPESAMD_1041 | S14 family endopeptidase ClpP |