Genome Explorer: Lactobacillus plantarum WCFS1 (SEQF1965.3)
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NCBI Annotation for SEQF1965.3
| Genome selected: Lactobacillus plantarum WCFS1 | |||
| Contigs: | 4 | Bases: | 3348624 bps |
| CDS: | 3108 | rRNA: | 15 |
| tmRNA: | 0 | tRNA: | 70 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 3001 | AL935263.2 | CCC80580.1 JB | 1857 [NA] | 618 [AA] | 3235592-3237448 | lp_3622 | sorbitol operon transcription antiterminator,BglG family |
| 3002 | AL935263.2 | CCC80581.1 JB | 804 [NA] | 267 [AA] | 3237463-3238266 | lp_3623 | sorbitol-6-phosphate 2-dehydrogenase |
| 3003 | AL935263.2 | CCC80582.1 JB | 1008 [NA] | 335 [AA] | 3238621-3239628 | lp_3625 | transcription regulator, LacI family |
| 3004 | AL935263.2 | CCC80583.1 JB | 1386 [NA] | 461 [AA] | 3239713-3241098 | lp_3626 | maltose-isomaltose oligosaccharide proton symporter, GPH family |
| 3005 | AL935263.2 | CCC80584.1 JB | 1677 [NA] | 558 [AA] | 3241117-3242793 | lp_3627 | exo-alfa-1,4-glucosidase |
| 3006 | AL935263.2 | CCC80585.1 JB | 1386 [NA] | 461 [AA] | 3242952-3244337 | lp_3629 | beta-galactosidase |
| 3007 | AL935263.2 | CCC80586.1 JB | 879 [NA] | 292 [AA] | 3244349-3245227 | lp_3630 | bifunctional protien: transcription regulator; sugar kinase, ROK family |
| 3008 | AL935263.2 | CCC80587.1 JB | 2700 [NA] | 899 [AA] | 3245227-3247926 | lp_3631 | alpha-mannosidase (promiscuous) |
| 3009 | AL935263.2 | CCC80588.1 JB | 1290 [NA] | 429 [AA] | 3247933-3249222 | lp_3632 | glycosyl hydrolase, DUF336 family |
| 3010 | AL935263.2 | CCC80589.1 JB | 1065 [NA] | 354 [AA] | 3249370-3250434 | lp_3633 | transcription regulator, GntR family |
| 3011 | AL935263.2 | CCC80590.1 JB | 2148 [NA] | 715 [AA] | 3250440-3252587 | lp_3634 | alpha-1,2-mannosidase |
| 3012 | AL935263.2 | CCC80591.1 JB | 1137 [NA] | 378 [AA] | 3252834-3253970 | lp_3635 | ABC transporter, ATP-binding protein, mannose related oligosaccharides |
| 3013 | AL935263.2 | CCC80592.1 JB | 864 [NA] | 287 [AA] | 3254221-3255084 | lp_3637 | fructokinase |
| 3014 | AL935263.2 | CCC80593.1 JB | 1461 [NA] | 486 [AA] | 3255180-3256640 | lp_3638 | two-component system response regulator |
| 3015 | AL935263.2 | CCC80594.1 JB | 1713 [NA] | 570 [AA] | 3256640-3258352 | lp_3639 | two-component system histidine protein kinase; sensor protein |
| 3016 | AL935263.2 | CCC80595.1 JB | 612 [NA] | 203 [AA] | 3258353-3258964 | lp_3640 | hypothetical membrane protein, DUF624 family |
| 3017 | AL935263.2 | CCC80596.1 JB | 1626 [NA] | 541 [AA] | 3259037-3260662 | lp_3641 | glucan 1,6-alpha-glucosidase |
| 3018 | AL935263.2 | CCC80597.1 JB | 1473 [NA] | 490 [AA] | 3260765-3262237 | lp_3642 | ABC transporter, substrate binding protein,mannose-related oligosaccharides |
| 3019 | AL935263.2 | CCC80598.1 JB | 918 [NA] | 305 [AA] | 3262327-3263244 | lp_3643 | ABC transporter, permease protein,mannose-related oligosaccharides |
| 3020 | AL935263.2 | CCC80599.1 JB | 963 [NA] | 320 [AA] | 3263257-3264219 | lp_3644 | ABC transporter, permease protein,mannose-related oligosaccharides |
| 3021 | AL935263.2 | CCC80600.1 JB | 1851 [NA] | 616 [AA] | 3264555-3266405 | lp_3645 | beta hexosamidase or lacto-N-biosidase or beta N-acetylglucosamidase |
| 3022 | AL935263.2 | CCC80601.1 JB | 828 [NA] | 275 [AA] | 3266576-3267403 | lp_3646 | transcription regulator, AraC family |
| 3023 | AL935263.2 | CCC80602.1 JB | 1749 [NA] | 582 [AA] | 3267532-3269280 | lp_3647 | ABC transporter, ATP-binding and permease protein |
| 3024 | AL935263.2 | CCC80603.1 JB | 1791 [NA] | 596 [AA] | 3269282-3271072 | lp_3648 | ABC transporter, ATP-binding and permease protein |
| 3025 | AL935263.2 | CCC80604.1 JB | 1050 [NA] | 349 [AA] | 3271302-3272351 | lp_3649 | transcription regulator, GntR family |
| 3026 | AL935263.2 | CCC80605.1 JB | 867 [NA] | 288 [AA] | 3272383-3273249 | lp_3650 | regulator, Fis family |
| 3027 | AL935263.2 | CCC80606.1 JB | 378 [NA] | 125 [AA] | 3273499-3273876 | lp_3652 | PTS system, glucitol/sorbitol-specific EIIA component |
| 3028 | AL935263.2 | CCC80607.1 JB | 1020 [NA] | 339 [AA] | 3273904-3274923 | lp_3653 | PTS system, glucitol/sorbitol-specific EIIB component and second of two IIC components |
| 3029 | AL935263.2 | CCC80608.1 JB | 552 [NA] | 183 [AA] | 3274947-3275498 | lp_3654 | PTS system, glucitol/sorbitol-specific EIIC component |
| 3030 | AL935263.2 | CCC80609.1 JB | 507 [NA] | 168 [AA] | 3275503-3276009 | lp_3655 | sorbitol operon activator |
| 3031 | AL935263.2 | CCC80610.1 JB | 1866 [NA] | 621 [AA] | 3276009-3277874 | lp_3656 | sorbitol operon transcription antiterminator,BglG family |
| 3032 | AL935263.2 | CCC80611.1 JB | 804 [NA] | 267 [AA] | 3277908-3278711 | lp_3657 | sorbitol-6-phosphate 2-dehydrogenase |
| 3033 | AL935263.2 | CCC80612.1 JB | 885 [NA] | 294 [AA] | 3279016-3279900 | lp_3658 | ribose transport protein |
| 3034 | AL935263.2 | CCC80613.1 JB | 396 [NA] | 131 [AA] | 3279930-3280325 | lp_3659 | D-ribose mutarotase |
| 3035 | AL935263.2 | CCC80614.1 JB | 921 [NA] | 306 [AA] | 3280328-3281248 | lp_3660 | ribokinase |
| 3036 | AL935263.2 | CCC80615.1 JB | 999 [NA] | 332 [AA] | 3281352-3282350 | lp_3661 | transcription regulator, LacI family, ribose |
| 3037 | AL935263.2 | CCC80616.1 JB | 2604 [NA] | 867 [AA] | 3282610-3285213 | lp_3662 | bifunctional protein: alcohol dehydrogenase; acetaldehyde dehydrogenase |
| 3038 | AL935263.2 | CCC80617.1 JB | 462 [NA] | 153 [AA] | 3285502-3285963 | lp_3663 | nucleotide-binding protein, universal stress protein UspA family |
| 3039 | AL935263.2 | CCC80618.1 JB | 546 [NA] | 181 [AA] | 3286154-3286699 | lp_3664 | transcriptional regulator of phenolic acid metabolism, PadR family |
| 3040 | AL935263.2 | CCC80619.1 JB | 537 [NA] | 178 [AA] | 3286815-3287351 | lp_3665 | phenolic acid decarboxylase |
| 3041 | AL935263.2 | CCC80620.1 JB | 801 [NA] | 266 [AA] | 3287513-3288313 | lp_3666 | aromatic compound hydratase/decarboxylase |
| 3042 | AL935263.2 | CCC80621.1 JB | 483 [NA] | 160 [AA] | 3289085-3289567 | lp_3668 | acetyltransferase, GNAT family |
| 3043 | AL935263.2 | CCC80622.1 JB | 867 [NA] | 288 [AA] | 3289725-3290591 | lp_3669 | DegV family protein |
| 3044 | AL935263.2 | CCC80623.1 JB | 423 [NA] | 140 [AA] | 3290690-3291112 | lp_3672 | transcription regulator, Xre family |
| 3045 | AL935263.2 | CCC80624.1 JB | 1317 [NA] | 438 [AA] | 3291125-3292441 | lp_3673 | aminopeptidase C |
| 3046 | AL935263.2 | CCC80625.1 JB | 588 [NA] | 195 [AA] | 3292670-3293257 | lp_3675 | signal peptidase I |
| 3047 | AL935263.2 | CCC80626.1 JB | 1539 [NA] | 512 [AA] | 3293466-3295004 | lp_3676 | cell surface protein precursor, CscC family |
| 3048 | AL935263.2 | CCC80627.1 JB | 342 [NA] | 113 [AA] | 3295024-3295365 | lp_3677 | cell surface protein precursor, CscD family,LPXTG-motif cell wall anchor |
| 3049 | AL935263.2 | CCC80628.1 JB | 1062 [NA] | 353 [AA] | 3295385-3296446 | lp_3678 | cell surface protein precursor, CscA/DUF916 family |
| 3050 | AL935263.2 | CCC80629.1 JB | 738 [NA] | 245 [AA] | 3296593-3297330 | lp_3679 | cell surface protein precursor, CscB family |
| 3051 | AL935263.2 | CCC80630.1 JB | 1911 [NA] | 636 [AA] | 3297586-3299496 | lp_3681 | cell division protein GidA |
| 3052 | AL935263.2 | CCC80631.1 JB | 1392 [NA] | 463 [AA] | 3299515-3300906 | lp_3682 | GTPase and tRNA-U34 5-formylation enzyme |
| 3053 | AL935263.2 | CCC80632.1 JB | 969 [NA] | 322 [AA] | 3301138-3302106 | lp_3683 | single stranded DNA-binding protein |
| 3054 | AL935263.2 | CCC80633.1 JB | 1254 [NA] | 417 [AA] | 3302592-3303845 | lp_3684 | amidohydrolase family protein |
| 3055 | AL935263.2 | CCC80634.1 JB | 1638 [NA] | 545 [AA] | 3303978-3305615 | lp_3686 | ABC transporter, substrate binding protein |
| 3056 | AL935263.2 | CCC80635.1 JB | 834 [NA] | 277 [AA] | 3306330-3307163 | lp_3687 | preprotein translocase, YidC subunit |
| 3057 | AL935263.2 | CCC80636.1 JB | 345 [NA] | 114 [AA] | 3307179-3307523 | lp_3688 | ribonuclease P |
| 3058 | AL935263.2 | CCC80637.1 JB | 135 [NA] | 44 [AA] | 3307634-3307768 | lp_3688a | 50S ribosomal protein L34 |
| 3059 | CR377164.1 | CAG17825.1 JB | 960 [NA] | 319 [AA] | 163-1122 | replication protein | |
| 3060 | CR377164.1 | CAG17826.1 JB | 147 [NA] | 48 [AA] | 1260-1406 | hypothetical protein | |
| 3061 | CR377164.1 | CAG17827.1 JB | 183 [NA] | 60 [AA] | 1627-1809 | hypothetical protein | |
| 3062 | CR377165.1 | CAG17828.1 JB | 660 [NA] | 219 [AA] | 102-761 | replication protein | |
| 3063 | CR377165.1 | CAG17829.1 JB | 441 [NA] | 146 [AA] | 953-1393 | hypothetical protein | |
| 3064 | CR377165.1 | CAG17830.1 JB | 204 [NA] | 67 [AA] | 1686-1889 | hypothetical protein | |
| 3065 | CR377165.1 | CAG17831.1 JB | 159 [NA] | 52 [AA] | 2242-35 | copy-number control protein | |
| 3066 | CR377166.1 | CAG17832.1 JB | 282 [NA] | 93 [AA] | 35839-51 | DNA-damage-inducible gene | |
| 3067 | CR377166.1 | CAG17833.1 JB | 309 [NA] | 102 [AA] | 302-610 | replication protein | |
| 3068 | CR377166.1 | CAG17834.1 JB | 333 [NA] | 110 [AA] | 925-1257 | hypothetical protein | |
| 3069 | CR377166.1 | CAG17835.1 JB | 801 [NA] | 266 [AA] | 2061-2861 | copy number control protein | |
| 3070 | CR377166.1 | CAG17836.1 JB | 351 [NA] | 116 [AA] | 2863-3213 | hypothetical protein | |
| 3071 | CR377166.1 | CAG17837.1 JB | 243 [NA] | 80 [AA] | 3344-3586 | hypothetical protein | |
| 3072 | CR377166.1 | CAG17838.1 JB | 555 [NA] | 184 [AA] | 3816-4370 | putative resolvase | |
| 3073 | CR377166.1 | CAG17839.1 JB | 207 [NA] | 68 [AA] | 4649-4855 | hypothetical protein | |
| 3074 | CR377166.1 | CAG17840.1 JB | 264 [NA] | 87 [AA] | 5378-5641 | hypothetical protein | |
| 3075 | CR377166.1 | CAG17841.1 JB | 360 [NA] | 119 [AA] | 5713-6072 | regulator of arsenical resistance | |
| 3076 | CR377166.1 | CAG17842.1 JB | 363 [NA] | 120 [AA] | 6059-6421 | repressor of arsenical resistance | |
| 3077 | CR377166.1 | CAG17843.1 JB | 1731 [NA] | 576 [AA] | 6505-8235 | arsenical pump-driving ATPase | |
| 3078 | CR377166.1 | CAG17844.1 JB | 1296 [NA] | 431 [AA] | 8294-9589 | arsenical pump membrane protein | |
| 3079 | CR377166.1 | CAG17845.1 JB | 330 [NA] | 109 [AA] | 9606-9935 | hypothetical protein | |
| 3080 | CR377166.1 | CAG17846.1 JB | 300 [NA] | 99 [AA] | 9958-10257 | repressor of arsenical resistance | |
| 3081 | CR377166.1 | CAG17847.1 JB | 1401 [NA] | 466 [AA] | 10281-11681 | NADH oxidase (putative) | |
| 3082 | CR377166.1 | CAG17848.1 JB | 369 [NA] | 122 [AA] | 12031-12399 | putative positive regulator of cadmium resistance | |
| 3083 | CR377166.1 | CAG17849.1 JB | 615 [NA] | 204 [AA] | 12401-13015 | putative cadmium resistance gene | |
| 3084 | CR377166.1 | CAG17850.1 JB | 1035 [NA] | 344 [AA] | 13100-14134 | putative transposase | |
| 3085 | CR377166.1 | CAG17851.1 JB | 160 [NA] | 53 [AA] | <14245-14404 | hypothetical protein | |
| 3086 | CR377166.1 | CAG17852.1 JB | 216 [NA] | 71 [AA] | 14408-14623 | hypothetical protein | |
| 3087 | CR377166.1 | CAG17853.1 JB | 2136 [NA] | 711 [AA] | 14746-16881 | DNA topoisomerase | |
| 3088 | CR377166.1 | CAG17854.1 JB | 411 [NA] | 136 [AA] | 16888-17298 | hypothetical protein | |
| 3089 | CR377166.1 | CAG17855.1 JB | 858 [NA] | 285 [AA] | 17313-18170 | conjugation protein | |
| 3090 | CR377166.1 | CAG17856.1 JB | 375 [NA] | 124 [AA] | 18176-18550 | hypothetical protein | |
| 3091 | CR377166.1 | CAG17857.1 JB | 1512 [NA] | 503 [AA] | 18565-20076 | conjugation protein | |
| 3092 | CR377166.1 | CAG17858.1 JB | 471 [NA] | 156 [AA] | 20078-20548 | conjugation protein | |
| 3093 | CR377166.1 | CAG17859.1 JB | 369 [NA] | 122 [AA] | 20549-20917 | hypothetical protein | |
| 3094 | CR377166.1 | CAG17860.1 JB | 618 [NA] | 205 [AA] | 20904-21521 | hypothetical protein | |
| 3095 | CR377166.1 | CAG17861.1 JB | 1155 [NA] | 384 [AA] | 21536-22690 | hypothetical protein | |
| 3096 | CR377166.1 | CAG17862.1 JB | 1419 [NA] | 472 [AA] | 22691-24109 | conjugation protein | |
| 3097 | CR377166.1 | CAG17863.1 JB | 2019 [NA] | 672 [AA] | 24102-26120 | conjugation protein | |
| 3098 | CR377166.1 | CAG17864.1 JB | 660 [NA] | 219 [AA] | 26132-26791 | conjugation protein | |
| 3099 | CR377166.1 | CAG17865.1 JB | 363 [NA] | 120 [AA] | 26760-27122 | conjugation protein | |
| 3100 | CR377166.1 | CAG17866.1 JB | 336 [NA] | 111 [AA] | 27143-27478 | conjugation protein | |
| 3101 | CR377166.1 | CAG17867.1 JB | 615 [NA] | 204 [AA] | 27480-28094 | hypothetical protein | |
| 3102 | CR377166.1 | CAG17868.1 JB | 339 [NA] | 112 [AA] | 28133-28471 | hypothetical protein | |
| 3103 | CR377166.1 | CAG17869.1 JB | 2061 [NA] | 686 [AA] | 28524-30584 | nickase | |
| 3104 | CR377166.1 | CAG17870.1 JB | 210 [NA] | 69 [AA] | 30856-31065 | hypothetical protein | |
| 3105 | CR377166.1 | CAG17871.1 JB | 279 [NA] | 92 [AA] | 31088-31366 | hypothetical protein | |
| 3106 | CR377166.1 | CAG17872.1 JB | 315 [NA] | 104 [AA] | 31356-31670 | hypothetical protein | |
| 3107 | CR377166.1 | CAG17873.1 JB | 587 [NA] | 195 [AA] | <31880->32466 | putative resolvase | |
| 3108 | CR377166.1 | CAG17874.1 JB | 2994 [NA] | 997 [AA] | 32645-35638 | putative transposase |