Genome Explorer: Fusobacterium nucleatum subsp. nucleatum ATCC 23726 (SEQF2067.1)
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NCBI Annotation for SEQF2067.1
| Genome selected: Fusobacterium nucleatum subsp. nucleatum ATCC 23726 | |||
| Contigs: | 67 | Bases: | 2237034 bps |
| CDS: | 2126 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 43 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | ADVK01000055.1 | EFG94480.1 JB | 657 [NA] | 218 [AA] | 135917-136573 | HMPREF0397_2001 | TrkA N-terminal domain protein |
| 2002 | ADVK01000055.1 | EFG94481.1 JB | 1347 [NA] | 448 [AA] | 136588-137934 | HMPREF0397_2002 | potassium uptake protein, TrkH family |
| 2003 | ADVK01000055.1 | EFG94482.1 JB | 1374 [NA] | 457 [AA] | 137949-139322 | HMPREF0397_2003 | MATE efflux family protein |
| 2004 | ADVK01000055.1 | EFG94483.1 JB | 1566 [NA] | 521 [AA] | 139325-140890 | HMPREF0397_2004 | chloride transporter, ClC family |
| 2005 | ADVK01000055.1 | EFG94484.1 JB | 645 [NA] | 214 [AA] | 140984-141628 | HMPREF0397_2005 | pyroglutamyl-peptidase I |
| 2006 | ADVK01000055.1 | EFG94485.1 JB | 750 [NA] | 249 [AA] | 141600-142349 | HMPREF0397_2006 | aminotransferase, class IV |
| 2007 | ADVK01000055.1 | EFG94486.1 JB | 1353 [NA] | 450 [AA] | 142343-143695 | HMPREF0397_2007 | aminodeoxychorismate synthase, component I |
| 2008 | ADVK01000055.1 | EFG94487.1 JB | 612 [NA] | 203 [AA] | 143679-144290 | HMPREF0397_2008 | glutamine amidotransferase, class I |
| 2009 | ADVK01000055.1 | EFG94488.1 JB | 792 [NA] | 263 [AA] | 144485-145276 | HMPREF0397_2009 | putative diaminopimelate epimerase |
| 2010 | ADVK01000055.1 | EFG94489.1 JB | 636 [NA] | 211 [AA] | 145434-146069 | HMPREF0397_2010 | V-type ATPase, D subunit |
| 2011 | ADVK01000055.1 | EFG94490.1 JB | 1377 [NA] | 458 [AA] | 146080-147456 | HMPREF0397_2011 | ATP synthase ab domain protein |
| 2012 | ADVK01000055.1 | EFG94491.1 JB | 1770 [NA] | 589 [AA] | 147449-149218 | HMPREF0397_2012 | ATP synthase ab domain protein |
| 2013 | ADVK01000055.1 | EFG94492.1 JB | 309 [NA] | 102 [AA] | 149236-149544 | HMPREF0397_2013 | ATP synthase, subunit F |
| 2014 | ADVK01000055.1 | EFG94493.1 JB | 1002 [NA] | 333 [AA] | 149537-150538 | HMPREF0397_2014 | ATP synthase, subunit C |
| 2015 | ADVK01000055.1 | EFG94494.1 JB | 552 [NA] | 183 [AA] | 150548-151099 | HMPREF0397_2015 | putative ATP synthase, subunit E |
| 2016 | ADVK01000055.1 | EFG94495.1 JB | 483 [NA] | 160 [AA] | 151115-151597 | HMPREF0397_2016 | V-type sodium ATPase, K subunit |
| 2017 | ADVK01000055.1 | EFG94496.1 JB | 1917 [NA] | 638 [AA] | 151758-153674 | HMPREF0397_2017 | V-type sodium ATPase, I subunit |
| 2018 | ADVK01000055.1 | EFG94497.1 JB | 342 [NA] | 113 [AA] | 153661-154002 | HMPREF0397_2018 | hypothetical protein |
| 2019 | ADVK01000055.1 | EFG94498.1 JB | 807 [NA] | 268 [AA] | 154229-155035 | HMPREF0397_2019 | transcriptional regulator, MerR family |
| 2020 | ADVK01000055.1 | EFG94499.1 JB | 882 [NA] | 293 [AA] | 155236-156117 | HMPREF0397_2020 | putative membrane protein |
| 2021 | ADVK01000055.1 | EFG94500.1 JB | 1191 [NA] | 396 [AA] | 156150-157340 | HMPREF0397_2021 | Cys/Met metabolism PLP-dependent enzyme |
| 2022 | ADVK01000055.1 | EFG94501.1 JB | 1260 [NA] | 419 [AA] | 157588-158847 | HMPREF0397_2022 | Cys/Met metabolism PLP-dependent enzyme |
| 2023 | ADVK01000055.1 | EFG94502.1 JB | 1536 [NA] | 511 [AA] | 158894-160429 | HMPREF0397_2023 | amino acid carrier protein |
| 2024 | ADVK01000055.1 | EFG94503.1 JB | 228 [NA] | 75 [AA] | 160499-160726 | HMPREF0397_2024 | hypothetical protein |
| 2025 | ADVK01000055.1 | EFG94504.1 JB | 165 [NA] | 54 [AA] | 160708-160872 | HMPREF0397_2025 | hypothetical protein |
| 2026 | ADVK01000055.1 | EFG94505.1 JB | 189 [NA] | 62 [AA] | 161058-161246 | HMPREF0397_2026 | hypothetical protein |
| 2027 | ADVK01000055.1 | EFG94506.1 JB | 297 [NA] | 98 [AA] | 161314-161610 | HMPREF0397_2027 | hypothetical protein |
| 2028 | ADVK01000055.1 | EFG94507.1 JB | 621 [NA] | 206 [AA] | 161788-162408 | HMPREF0397_2028 | putative thiamine-phosphate diphosphorylase |
| 2029 | ADVK01000055.1 | EFG94508.1 JB | 1131 [NA] | 376 [AA] | 162411-163541 | HMPREF0397_2029 | thiazole biosynthesis protein ThiH |
| 2030 | ADVK01000055.1 | EFG94509.1 JB | 774 [NA] | 257 [AA] | 163541-164314 | HMPREF0397_2030 | thiazole biosynthesis protein ThiG |
| 2031 | ADVK01000055.1 | EFG94510.1 JB | 621 [NA] | 206 [AA] | 164315-164935 | HMPREF0397_2031 | thiamine biosynthesis protein ThiF |
| 2032 | ADVK01000055.1 | EFG94511.1 JB | 207 [NA] | 68 [AA] | 164939-165145 | HMPREF0397_2032 | thiamine biosynthesis protein ThiS |
| 2033 | ADVK01000055.1 | EFG94512.1 JB | 1302 [NA] | 433 [AA] | 165146-166447 | HMPREF0397_2033 | thiamine biosynthesis protein ThiC |
| 2034 | ADVK01000055.1 | EFG94513.1 JB | 621 [NA] | 206 [AA] | 166464-167084 | HMPREF0397_2034 | thiamine-phosphate diphosphorylase |
| 2035 | ADVK01000055.1 | EFG94514.1 JB | 870 [NA] | 289 [AA] | 167094-167963 | HMPREF0397_2035 | phosphomethylpyrimidine kinase |
| 2036 | ADVK01000055.1 | EFG94515.1 JB | 747 [NA] | 248 [AA] | 168456-169202 | HMPREF0397_2036 | hypothetical protein |
| 2037 | ADVK01000055.1 | EFG94516.1 JB | 555 [NA] | 184 [AA] | 169206-169760 | HMPREF0397_2037 | hypothetical protein |
| 2038 | ADVK01000055.1 | EFG94517.1 JB | 1305 [NA] | 434 [AA] | 169891-171195 | HMPREF0397_2038 | phosphopyruvate hydratase |
| 2039 | ADVK01000055.1 | EFG94518.1 JB | 1428 [NA] | 475 [AA] | 171221-172648 | HMPREF0397_2039 | pyruvate kinase |
| 2040 | ADVK01000055.1 | EFG94519.1 JB | 744 [NA] | 247 [AA] | 174119-174862 | HMPREF0397_2040 | hypothetical protein |
| 2041 | ADVK01000055.1 | EFG94520.1 JB | 2484 [NA] | 827 [AA] | 174930-177413 | HMPREF0397_2041 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
| 2042 | ADVK01000055.1 | EFG94521.1 JB | 270 [NA] | 89 [AA] | 177419-177688 | HMPREF0397_2042 | phosphocarrier, HPr family |
| 2043 | ADVK01000055.1 | EFG94522.1 JB | 825 [NA] | 274 [AA] | 177874-178698 | HMPREF0397_2043 | ethanolamine utilization protein EutJ family protein |
| 2044 | ADVK01000055.1 | EFG94523.1 JB | 456 [NA] | 151 [AA] | 178930-179385 | HMPREF0397_2044 | hypothetical protein |
| 2045 | ADVK01000055.1 | EFG94524.1 JB | 474 [NA] | 157 [AA] | 179407-179880 | HMPREF0397_2045 | hypothetical protein |
| 2046 | ADVK01000055.1 | EFG94525.1 JB | 981 [NA] | 326 [AA] | 180021-181001 | HMPREF0397_2046 | bifunctional protein RfaE, domain I |
| 2047 | ADVK01000055.1 | EFG94526.1 JB | 495 [NA] | 164 [AA] | 180995-181489 | HMPREF0397_2047 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
| 2048 | ADVK01000055.1 | EFG94527.1 JB | 1353 [NA] | 450 [AA] | 181505-182857 | HMPREF0397_2048 | MATE efflux family protein |
| 2049 | ADVK01000055.1 | EFG94528.1 JB | 522 [NA] | 173 [AA] | 182869-183390 | HMPREF0397_2049 | putative cob(I)yrinic acid a,c-diamide adenosyltransferase |
| 2050 | ADVK01000055.1 | EFG94529.1 JB | 759 [NA] | 252 [AA] | 183399-184157 | HMPREF0397_2050 | putative mutator MutT protein |
| 2051 | ADVK01000055.1 | EFG94530.1 JB | 396 [NA] | 131 [AA] | 184207-184602 | HMPREF0397_2051 | hypothetical protein |
| 2052 | ADVK01000055.1 | EFG94531.1 JB | 126 [NA] | 41 [AA] | 184616-184741 | HMPREF0397_2052 | hypothetical protein |
| 2053 | ADVK01000055.1 | EFG94532.1 JB | 1728 [NA] | 575 [AA] | 184842-186569 | HMPREF0397_2053 | phosphoenolpyruvate-protein phosphotransferase |
| 2054 | ADVK01000055.1 | EFG94533.1 JB | 264 [NA] | 87 [AA] | 186636-186899 | HMPREF0397_2054 | phosphocarrier, HPr family |
| 2055 | ADVK01000055.1 | EFG94534.1 JB | 1671 [NA] | 556 [AA] | 187047->188717 | HMPREF0397_2055 | hypothetical protein |
| 2056 | ADVK01000056.1 | EFG94301.1 JB | 468 [NA] | 155 [AA] | 80-547 | HMPREF0397_2056 | cupin domain protein |
| 2057 | ADVK01000056.1 | EFG94302.1 JB | 1026 [NA] | 341 [AA] | 813-1838 | HMPREF0397_2057 | putative glycoprotease GCP |
| 2058 | ADVK01000056.1 | EFG94303.1 JB | 570 [NA] | 189 [AA] | 1835-2404 | HMPREF0397_2058 | regulatory protein RecX |
| 2059 | ADVK01000056.1 | EFG94304.1 JB | 1146 [NA] | 381 [AA] | 2376-3521 | HMPREF0397_2059 | RecA protein |
| 2060 | ADVK01000056.1 | EFG94305.1 JB | 1008 [NA] | 335 [AA] | 3518-4525 | HMPREF0397_2060 | Heptosyltransferase |
| 2061 | ADVK01000056.1 | EFG94306.1 JB | 597 [NA] | 198 [AA] | 4527-5123 | HMPREF0397_2061 | hypothetical protein |
| 2062 | ADVK01000056.1 | EFG94307.1 JB | 1029 [NA] | 342 [AA] | 5116-6144 | HMPREF0397_2062 | Heptosyltransferase |
| 2063 | ADVK01000056.1 | EFG94308.1 JB | 1020 [NA] | 339 [AA] | 6141-7160 | HMPREF0397_2063 | heptosyltransferase |
| 2064 | ADVK01000056.1 | EFG94309.1 JB | 810 [NA] | 269 [AA] | 7150-7959 | HMPREF0397_2064 | glycosyltransferase, group 2 family protein |
| 2065 | ADVK01000056.1 | EFG94310.1 JB | 1113 [NA] | 370 [AA] | 7947-9059 | HMPREF0397_2065 | polysaccharide deacetylase |
| 2066 | ADVK01000056.1 | EFG94311.1 JB | 1305 [NA] | 434 [AA] | 9269-10573 | HMPREF0397_2066 | glutamate-1-semialdehyde-2,1-aminomutase |
| 2067 | ADVK01000056.1 | EFG94312.1 JB | 462 [NA] | 153 [AA] | 10554-11015 | HMPREF0397_2067 | putative precorrin-2 dehydrogenase |
| 2068 | ADVK01000056.1 | EFG94313.1 JB | 225 [NA] | 74 [AA] | 11192-11416 | HMPREF0397_2068 | preprotein translocase, SecG subunit |
| 2069 | ADVK01000056.1 | EFG94314.1 JB | 585 [NA] | 194 [AA] | 11560-12144 | HMPREF0397_2069 | acyl-phosphate glycerol 3-phosphate acyltransferase |
| 2070 | ADVK01000056.1 | EFG94315.1 JB | 1146 [NA] | 381 [AA] | 12162-13307 | HMPREF0397_2070 | DNA polymerase III, beta subunit |
| 2071 | ADVK01000056.1 | EFG94316.1 JB | 579 [NA] | 192 [AA] | 13334-13912 | HMPREF0397_2071 | TIGR00730 family protein |
| 2072 | ADVK01000056.1 | EFG94317.1 JB | 537 [NA] | 178 [AA] | 13977-14513 | HMPREF0397_2072 | hypothetical protein |
| 2073 | ADVK01000056.1 | EFG94318.1 JB | 1041 [NA] | 346 [AA] | 14672-15712 | HMPREF0397_2073 | hypothetical protein |
| 2074 | ADVK01000056.1 | EFG94319.1 JB | 1056 [NA] | 351 [AA] | 15734-16789 | HMPREF0397_2074 | putative membrane protein AbrB |
| 2075 | ADVK01000056.1 | EFG94320.1 JB | 1263 [NA] | 420 [AA] | 16795-18057 | HMPREF0397_2075 | hypothetical protein |
| 2076 | ADVK01000056.1 | EFG94321.1 JB | 216 [NA] | 71 [AA] | 18160-18375 | HMPREF0397_2076 | cold-shock DNA-binding domain protein |
| 2077 | ADVK01000056.1 | EFG94322.1 JB | 1122 [NA] | 373 [AA] | 18782-19903 | HMPREF0397_2077 | threonine/alanine tRNA ligase second additional domain protein |
| 2078 | ADVK01000056.1 | EFG94323.1 JB | 1077 [NA] | 358 [AA] | 19903-20979 | HMPREF0397_2078 | 23S rRNA m2A2503 methyltransferase |
| 2079 | ADVK01000056.1 | EFG94324.1 JB | 2253 [NA] | 750 [AA] | 20983-23235 | HMPREF0397_2079 | penicillin-binding protein, 1A family |
| 2080 | ADVK01000056.1 | EFG94325.1 JB | 2760 [NA] | 919 [AA] | 23237-25996 | HMPREF0397_2080 | hypothetical protein |
| 2081 | ADVK01000056.1 | EFG94326.1 JB | 1167 [NA] | 388 [AA] | 25993-27159 | HMPREF0397_2081 | Ser/Thr phosphatase family protein |
| 2082 | ADVK01000056.1 | EFG94327.1 JB | 2772 [NA] | 923 [AA] | 27143-29914 | HMPREF0397_2082 | RecF/RecN/SMC N-terminal domain protein |
| 2083 | ADVK01000056.1 | EFG94328.1 JB | 669 [NA] | 222 [AA] | 29923-30591 | HMPREF0397_2083 | hypothetical protein |
| 2084 | ADVK01000056.1 | EFG94329.1 JB | 618 [NA] | 205 [AA] | 30584-31201 | HMPREF0397_2084 | hypothetical protein |
| 2085 | ADVK01000056.1 | EFG94330.1 JB | 1032 [NA] | 343 [AA] | 31210-32241 | HMPREF0397_2085 | MORN repeat protein |
| 2086 | ADVK01000056.1 | EFG94331.1 JB | 990 [NA] | 329 [AA] | 32263-33252 | HMPREF0397_2086 | MORN repeat protein |
| 2087 | ADVK01000056.1 | EFG94332.1 JB | 1410 [NA] | 469 [AA] | 33384-34793 | HMPREF0397_2087 | outer membrane efflux protein |
| 2088 | ADVK01000056.1 | EFG94333.1 JB | 1074 [NA] | 357 [AA] | 34803-35876 | HMPREF0397_2088 | efflux transporter, RND family, MFP subunit |
| 2089 | ADVK01000056.1 | EFG94334.1 JB | 3069 [NA] | 1022 [AA] | 35873-38941 | HMPREF0397_2089 | RND transporter, HAE1/HME family, permease protein |
| 2090 | ADVK01000056.1 | EFG94335.1 JB | 441 [NA] | 146 [AA] | 38997-39437 | HMPREF0397_2090 | hypothetical protein |
| 2091 | ADVK01000056.1 | EFG94336.1 JB | 429 [NA] | 142 [AA] | 39684-40112 | HMPREF0397_2091 | flavodoxin |
| 2092 | ADVK01000056.1 | EFG94337.1 JB | 1212 [NA] | 403 [AA] | 40283-41494 | HMPREF0397_2092 | metallo-beta-lactamase domain protein |
| 2093 | ADVK01000057.1 | EFG94298.1 JB | 264 [NA] | 87 [AA] | <1-264 | HMPREF0397_2093 | hypothetical protein |
| 2094 | ADVK01000057.1 | EFG94299.1 JB | 540 [NA] | 179 [AA] | 278-817 | HMPREF0397_2094 | hypothetical protein |
| 2095 | ADVK01000057.1 | EFG94300.1 JB | 408 [NA] | 135 [AA] | 851-1258 | HMPREF0397_2095 | hypothetical protein |
| 2096 | ADVK01000059.1 | EFG94293.1 JB | 153 [NA] | 50 [AA] | 180-332 | HMPREF0397_2096 | hypothetical protein |
| 2097 | ADVK01000059.1 | EFG94294.1 JB | 153 [NA] | 50 [AA] | 334-486 | HMPREF0397_2097 | hypothetical protein |
| 2098 | ADVK01000059.1 | EFG94295.1 JB | 234 [NA] | 77 [AA] | 555-788 | HMPREF0397_2098 | hypothetical protein |
| 2099 | ADVK01000059.1 | EFG94296.1 JB | 459 [NA] | 152 [AA] | 837-1295 | HMPREF0397_2099 | acetyltransferase, GNAT family |
| 2100 | ADVK01000059.1 | EFG94297.1 JB | 1830 [NA] | 610 [AA] | 1522->3351 | HMPREF0397_2100 | Hep/Hag repeat protein |
| 2101 | ADVK01000060.1 | EFG94292.1 JB | 555 [NA] | 184 [AA] | <1-556 | HMPREF0397_2101 | transposase |
| 2102 | ADVK01000061.1 | EFG94291.1 JB | 1950 [NA] | 649 [AA] | 8->1957 | HMPREF0397_2102 | outer membrane autotransporter barrel domain protein |
| 2103 | ADVK01000062.1 | EFG94290.1 JB | 1767 [NA] | 589 [AA] | <1->1769 | HMPREF0397_2103 | hypothetical protein |
| 2104 | ADVK01000063.1 | EFG94288.1 JB | 252 [NA] | 83 [AA] | <1-253 | HMPREF0397_2104 | hypothetical protein |
| 2105 | ADVK01000063.1 | EFG94289.1 JB | 460 [NA] | 153 [AA] | 223->682 | HMPREF0397_2105 | OmpA family protein |
| 2106 | ADVK01000064.1 | EFG94287.1 JB | 1155 [NA] | 384 [AA] | 9->1164 | HMPREF0397_2106 | autotransporter beta-domain protein |
| 2107 | ADVK01000065.1 | EFG94286.1 JB | 270 [NA] | 89 [AA] | 41-310 | HMPREF0397_2107 | hypothetical protein |
| 2108 | ADVK01000066.1 | EFG94284.1 JB | 321 [NA] | 106 [AA] | <1-321 | HMPREF0397_2108 | hypothetical protein |
| 2109 | ADVK01000066.1 | EFG94285.1 JB | 732 [NA] | 243 [AA] | 305-1036 | HMPREF0397_2109 | transposase |
| 2110 | ADVK01000067.1 | EFG94267.1 JB | 1620 [NA] | 539 [AA] | 291-1910 | HMPREF0397_2110 | Na/Pi-cotransporter II-like protein |
| 2111 | ADVK01000067.1 | EFG94268.1 JB | 873 [NA] | 290 [AA] | 1966-2838 | HMPREF0397_2111 | hypothetical protein |
| 2112 | ADVK01000067.1 | EFG94269.1 JB | 1359 [NA] | 452 [AA] | 2851-4209 | HMPREF0397_2112 | putative dipeptidase |
| 2113 | ADVK01000067.1 | EFG94270.1 JB | 783 [NA] | 260 [AA] | 4238-5020 | HMPREF0397_2113 | VacJ-like protein |
| 2114 | ADVK01000067.1 | EFG94271.1 JB | 1284 [NA] | 427 [AA] | 5010-6293 | HMPREF0397_2114 | hypothetical protein |
| 2115 | ADVK01000067.1 | EFG94272.1 JB | 4365 [NA] | 1454 [AA] | 6306-10670 | HMPREF0397_2115 | DNA polymerase III, alpha subunit, Gram-positive type |
| 2116 | ADVK01000067.1 | EFG94273.1 JB | 564 [NA] | 187 [AA] | 10657-11220 | HMPREF0397_2116 | hypothetical protein |
| 2117 | ADVK01000067.1 | EFG94274.1 JB | 717 [NA] | 238 [AA] | 11230-11946 | HMPREF0397_2117 | tRNA (guanine-N(1)-)-methyltransferase |
| 2118 | ADVK01000067.1 | EFG94275.1 JB | 522 [NA] | 173 [AA] | 11943-12464 | HMPREF0397_2118 | 16S rRNA processing protein RimM |
| 2119 | ADVK01000067.1 | EFG94276.1 JB | 252 [NA] | 83 [AA] | 12473-12724 | HMPREF0397_2119 | hypothetical protein |
| 2120 | ADVK01000067.1 | EFG94277.1 JB | 255 [NA] | 84 [AA] | 12724-12978 | HMPREF0397_2120 | hypothetical protein |
| 2121 | ADVK01000067.1 | EFG94278.1 JB | 795 [NA] | 264 [AA] | 12975-13769 | HMPREF0397_2121 | dimethyladenosine transferase |
| 2122 | ADVK01000067.1 | EFG94279.1 JB | 528 [NA] | 175 [AA] | 13779-14306 | HMPREF0397_2122 | hypoxanthine phosphoribosyltransferase |
| 2123 | ADVK01000067.1 | EFG94280.1 JB | 720 [NA] | 239 [AA] | 14628-15347 | HMPREF0397_2123 | hypothetical protein |
| 2124 | ADVK01000067.1 | EFG94281.1 JB | 972 [NA] | 323 [AA] | 15348-16319 | HMPREF0397_2124 | hypothetical protein |
| 2125 | ADVK01000067.1 | EFG94282.1 JB | 813 [NA] | 270 [AA] | 16783-17595 | HMPREF0397_2125 | Transketolase, thiamine diphosphate binding domain protein |
| 2126 | ADVK01000067.1 | EFG94283.1 JB | 930 [NA] | 309 [AA] | 17620-18549 | HMPREF0397_2126 | Transketolase, pyridine binding domain protein |