Genome Explorer: Treponema socranskii VPI DR56BR1116 (SEQF2757.1)
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NCBI Annotation for SEQF2757.1
Genome selected: Treponema socranskii VPI DR56BR1116 | |||
Contigs: | 74 | Bases: | 2804628 bps |
CDS: | 2626 | rRNA: | 3 |
tmRNA: | 1 | tRNA: | 46 |
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# | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
---|---|---|---|---|---|---|---|
2501 | AUZJ01000069.1 | ERF59484.1 JB | 1380 [NA] | 459 [AA] | 31396-32775 | HMPREF1325_1419 | outer membrane efflux protein |
2502 | AUZJ01000069.1 | ERF59485.1 JB | 864 [NA] | 287 [AA] | 65911-66774 | HMPREF1325_1448 | hypothetical protein |
2503 | AUZJ01000069.1 | ERF59486.1 JB | 942 [NA] | 313 [AA] | 6712-7653 | HMPREF1325_1404 | 1-phosphofructokinase |
2504 | AUZJ01000069.1 | ERF59487.1 JB | 3099 [NA] | 1032 [AA] | 46525-49623 | HMPREF1325_1431 | type I site-specific deoxyribonuclease, HsdR family |
2505 | AUZJ01000069.1 | ERF59488.1 JB | 1737 [NA] | 578 [AA] | 57668-59404 | HMPREF1325_1439 | ABC transporter, ATP-binding protein |
2506 | AUZJ01000069.1 | ERF59489.1 JB | 648 [NA] | 215 [AA] | 7643-8290 | HMPREF1325_1405 | dihydroxyacetone kinase, L subunit |
2507 | AUZJ01000069.1 | ERF59490.1 JB | 684 [NA] | 227 [AA] | 61149-61832 | HMPREF1325_1444 | TonB protein, C-terminal domain protein |
2508 | AUZJ01000069.1 | ERF59491.1 JB | 453 [NA] | 150 [AA] | 91378-91830 | HMPREF1325_1477 | YhcH/YjgK/YiaL family protein |
2509 | AUZJ01000069.1 | ERF59492.1 JB | 1017 [NA] | 338 [AA] | 64063-65079 | HMPREF1325_1446 | putative lipoprotein |
2510 | AUZJ01000069.1 | ERF59493.1 JB | 1707 [NA] | 568 [AA] | 55965-57671 | HMPREF1325_1438 | ABC transporter, ATP-binding protein |
2511 | AUZJ01000069.1 | ERF59494.1 JB | 1173 [NA] | 391 [AA] | 92674->93846 | HMPREF1325_1479 | diguanylate cyclase (GGDEF) domain protein |
2512 | AUZJ01000069.1 | ERF59495.1 JB | 408 [NA] | 135 [AA] | 46053-46460 | HMPREF1325_1430 | toxin-antitoxin system toxin component, PIN family |
2513 | AUZJ01000069.1 | ERF59496.1 JB | 8919 [NA] | 2972 [AA] | 15200-24118 | HMPREF1325_1415 | hypothetical protein |
2514 | AUZJ01000069.1 | ERF59497.1 JB | 1083 [NA] | 360 [AA] | 10269-11351 | HMPREF1325_1408 | TIGR02757 family protein |
2515 | AUZJ01000069.1 | ERF59498.1 JB | 1287 [NA] | 428 [AA] | 88296-89582 | HMPREF1325_1474 | TRAP transporter, DctM subunit |
2516 | AUZJ01000069.1 | ERF59499.1 JB | 513 [NA] | 170 [AA] | 89579-90091 | HMPREF1325_1475 | TRAP transporter, DctQ-like membrane protein |
2517 | AUZJ01000069.1 | ERF59500.1 JB | 612 [NA] | 203 [AA] | 71703-72314 | HMPREF1325_1456 | repressor LexA |
2518 | AUZJ01000069.1 | ERF59501.1 JB | 1008 [NA] | 335 [AA] | 90173-91180 | HMPREF1325_1476 | TRAP transporter solute receptor, DctP family |
2519 | AUZJ01000069.1 | ERF59502.1 JB | 597 [NA] | 198 [AA] | 81836-82432 | HMPREF1325_1467 | flavodoxin |
2520 | AUZJ01000069.1 | ERF59503.1 JB | 1056 [NA] | 351 [AA] | 49698-50753 | HMPREF1325_1432 | periplasmic-binding protein domain protein |
2521 | AUZJ01000069.1 | ERF59504.1 JB | 975 [NA] | 324 [AA] | 77979-78953 | HMPREF1325_1464 | D-allose transport system permease protein AlsC |
2522 | AUZJ01000069.1 | ERF59505.1 JB | 450 [NA] | 149 [AA] | 70067-70516 | HMPREF1325_1453 | putative lipoprotein |
2523 | AUZJ01000069.1 | ERF59506.1 JB | 453 [NA] | 150 [AA] | 74688-75140 | HMPREF1325_1460 | ribose-5-phosphate isomerase B |
2524 | AUZJ01000069.1 | ERF59507.1 JB | 126 [NA] | 41 [AA] | 84458-84583 | HMPREF1325_1470 | hypothetical protein |
2525 | AUZJ01000069.1 | ERF59508.1 JB | 1356 [NA] | 451 [AA] | 36330-37685 | HMPREF1325_1423 | hypothetical protein |
2526 | AUZJ01000069.1 | ERF59509.1 JB | 966 [NA] | 321 [AA] | 13013-13978 | HMPREF1325_1413 | hypothetical protein |
2527 | AUZJ01000069.1 | ERF59510.1 JB | 786 [NA] | 261 [AA] | 9295-10080 | HMPREF1325_1407 | transcriptional regulator, DeoR family |
2528 | AUZJ01000069.1 | ERF59511.1 JB | 636 [NA] | 211 [AA] | 35688-36323 | HMPREF1325_1422 | tetratricopeptide repeat protein |
2529 | AUZJ01000069.1 | ERF59512.1 JB | 333 [NA] | 110 [AA] | 59401-59733 | HMPREF1325_1440 | nitrous oxide-stimulated promoter |
2530 | AUZJ01000069.1 | ERF59513.1 JB | 990 [NA] | 329 [AA] | 72616-73605 | HMPREF1325_1458 | HPr(Ser) kinase/phosphatase |
2531 | AUZJ01000069.1 | ERF59514.1 JB | 114 [NA] | 37 [AA] | 70492-70605 | HMPREF1325_1454 | hypothetical protein |
2532 | AUZJ01000069.1 | ERF59515.1 JB | 1797 [NA] | 598 [AA] | 84652-86448 | HMPREF1325_1471 | arabinose isomerase |
2533 | AUZJ01000069.1 | ERF59516.1 JB | 3018 [NA] | 1005 [AA] | 27033-30050 | HMPREF1325_1417 | RND transporter, Hydrophobe/Amphiphile Efflux-1 (HAE1)/Heavy Metal Efflux (HME) family, permease protein |
2534 | AUZJ01000069.1 | ERF59517.1 JB | 660 [NA] | 219 [AA] | 54574-55233 | HMPREF1325_1436 | putative flavoredoxin |
2535 | AUZJ01000070.1 | ERF59433.1 JB | 489 [NA] | 163 [AA] | 1083->1571 | HMPREF1325_0014 | carbohydrate kinase, FGGY family protein |
2536 | AUZJ01000070.1 | ERF59434.1 JB | 831 [NA] | 276 [AA] | 250-1080 | HMPREF1325_0013 | ABC transporter, permease protein |
2537 | AUZJ01000070.1 | ERF59435.1 JB | 243 [NA] | 80 [AA] | 11-253 | HMPREF1325_0012 | hypothetical protein |
2538 | AUZJ01000071.1 | ERF59388.1 JB | 948 [NA] | 315 [AA] | 18844-19791 | HMPREF1325_0891 | sodium Bile acid symporter family protein |
2539 | AUZJ01000071.1 | ERF59389.1 JB | 1113 [NA] | 370 [AA] | <1-1114 | HMPREF1325_0872 | alanine racemase, N-terminal domain protein |
2540 | AUZJ01000071.1 | ERF59390.1 JB | 1029 [NA] | 342 [AA] | 39948-40976 | HMPREF1325_0910 | ABC transporter, solute-binding protein |
2541 | AUZJ01000071.1 | ERF59391.1 JB | 258 [NA] | 85 [AA] | 31015-31272 | HMPREF1325_0901 | sugar efflux transporter for intercellular exchange |
2542 | AUZJ01000071.1 | ERF59392.1 JB | 1935 [NA] | 644 [AA] | 46425-48359 | HMPREF1325_0914 | leucine rich repeat protein |
2543 | AUZJ01000071.1 | ERF59393.1 JB | 2331 [NA] | 776 [AA] | 22235-24565 | HMPREF1325_0895 | DNA-binding helix-turn-helix protein |
2544 | AUZJ01000071.1 | ERF59394.1 JB | 1032 [NA] | 343 [AA] | 29628-30659 | HMPREF1325_0900 | ABC transporter, solute-binding protein |
2545 | AUZJ01000071.1 | ERF59395.1 JB | 1110 [NA] | 369 [AA] | 25602-26711 | HMPREF1325_0897 | ABC transporter, ATP-binding protein |
2546 | AUZJ01000071.1 | ERF59396.1 JB | 1794 [NA] | 597 [AA] | 8448-10241 | HMPREF1325_0880 | flavocytochrome c |
2547 | AUZJ01000071.1 | ERF59397.1 JB | 678 [NA] | 225 [AA] | 1155-1832 | HMPREF1325_0873 | HTH domain protein |
2548 | AUZJ01000071.1 | ERF59398.1 JB | 660 [NA] | 219 [AA] | 18138-18797 | HMPREF1325_0890 | methyltransferase domain protein |
2549 | AUZJ01000071.1 | ERF59399.1 JB | 468 [NA] | 155 [AA] | 5837-6304 | HMPREF1325_0877 | tripartite tricarboxylate transporter TctB family protein |
2550 | AUZJ01000071.1 | ERF59400.1 JB | 873 [NA] | 290 [AA] | 48935-49807 | HMPREF1325_0916 | transposase, YhgA-like domain protein |
2551 | AUZJ01000071.1 | ERF59401.1 JB | 966 [NA] | 321 [AA] | 6371-7336 | HMPREF1325_0878 | tripartite tricarboxylate transporter family receptor |
2552 | AUZJ01000071.1 | ERF59402.1 JB | 1827 [NA] | 608 [AA] | 2358-4184 | HMPREF1325_0875 | flavocytochrome c |
2553 | AUZJ01000071.1 | ERF59403.1 JB | 906 [NA] | 301 [AA] | 10422-11327 | HMPREF1325_0881 | orotidine 5'-phosphate decarboxylase |
2554 | AUZJ01000071.1 | ERF59404.1 JB | 417 [NA] | 138 [AA] | 15981-16397 | HMPREF1325_0887 | positive regulator of sigma(E), RseC/MucC |
2555 | AUZJ01000071.1 | ERF59405.1 JB | 942 [NA] | 313 [AA] | 35543-36484 | HMPREF1325_0906 | PHP domain protein |
2556 | AUZJ01000071.1 | ERF59406.1 JB | 156 [NA] | 51 [AA] | 15658-15813 | HMPREF1325_0886 | hypothetical protein |
2557 | AUZJ01000071.1 | ERF59407.1 JB | 216 [NA] | 71 [AA] | 48707-48922 | HMPREF1325_0915 | hypothetical protein |
2558 | AUZJ01000071.1 | ERF59408.1 JB | 387 [NA] | 128 [AA] | 1829-2215 | HMPREF1325_0874 | hypothetical protein |
2559 | AUZJ01000071.1 | ERF59409.1 JB | 1383 [NA] | 460 [AA] | 12974-14356 | HMPREF1325_0884 | MmgE/PrpD family protein |
2560 | AUZJ01000071.1 | ERF59410.1 JB | 822 [NA] | 273 [AA] | 41159-41980 | HMPREF1325_0912 | transcriptional regulator, DeoR family |
2561 | AUZJ01000071.1 | ERF59411.1 JB | 1122 [NA] | 373 [AA] | 16923-18044 | HMPREF1325_0889 | polyprenyl synthetase |
2562 | AUZJ01000071.1 | ERF59412.1 JB | 1302 [NA] | 433 [AA] | 14366-15667 | HMPREF1325_0885 | 3-phosphoshikimate 1-carboxyvinyltransferase |
2563 | AUZJ01000071.1 | ERF59413.1 JB | 117 [NA] | 38 [AA] | 40998-41114 | HMPREF1325_0911 | hypothetical protein |
2564 | AUZJ01000071.1 | ERF59414.1 JB | 702 [NA] | 233 [AA] | 12162-12863 | HMPREF1325_0883 | ABC transporter, ATP-binding protein |
2565 | AUZJ01000071.1 | ERF59415.1 JB | 465 [NA] | 154 [AA] | 36485-36949 | HMPREF1325_0907 | hypothetical protein |
2566 | AUZJ01000071.1 | ERF59416.1 JB | 867 [NA] | 288 [AA] | 20597-21463 | HMPREF1325_0893 | pyridine nucleotide-disulfide oxidoreductase |
2567 | AUZJ01000071.1 | ERF59417.1 JB | 1527 [NA] | 508 [AA] | 4282-5808 | HMPREF1325_0876 | tripartite tricarboxylate transporter TctA family protein |
2568 | AUZJ01000071.1 | ERF59418.1 JB | 1125 [NA] | 374 [AA] | 31368-32492 | HMPREF1325_0902 | O-methyltransferase |
2569 | AUZJ01000071.1 | ERF59419.1 JB | 1371 [NA] | 456 [AA] | 34090-35460 | HMPREF1325_0905 | sodium:neurotransmitter symporter domain protein |
2570 | AUZJ01000071.1 | ERF59420.1 JB | 537 [NA] | 178 [AA] | 16394-16930 | HMPREF1325_0888 | tetratricopeptide repeat protein |
2571 | AUZJ01000071.1 | ERF59421.1 JB | 1725 [NA] | 574 [AA] | 26716-28440 | HMPREF1325_0898 | ABC transporter, permease protein |
2572 | AUZJ01000071.1 | ERF59422.1 JB | 768 [NA] | 255 [AA] | 21481-22248 | HMPREF1325_0894 | YjbR protein |
2573 | AUZJ01000071.1 | ERF59423.1 JB | 918 [NA] | 305 [AA] | 7381-8298 | HMPREF1325_0879 | dihydrodipicolinate synthetase family protein |
2574 | AUZJ01000071.1 | ERF59424.1 JB | 1110 [NA] | 369 [AA] | 28440-29549 | HMPREF1325_0899 | ABC transporter, ATP-binding protein |
2575 | AUZJ01000071.1 | ERF59425.1 JB | 1110 [NA] | 369 [AA] | 37056-38165 | HMPREF1325_0908 | ABC transporter, ATP-binding protein |
2576 | AUZJ01000071.1 | ERF59426.1 JB | 855 [NA] | 284 [AA] | 33160-34014 | HMPREF1325_0904 | acyltransferase |
2577 | AUZJ01000071.1 | ERF59427.1 JB | 543 [NA] | 180 [AA] | 19965-20507 | HMPREF1325_0892 | glutathione peroxidase |
2578 | AUZJ01000071.1 | ERF59428.1 JB | 1695 [NA] | 564 [AA] | 38182-39876 | HMPREF1325_0909 | ABC transporter, permease protein |
2579 | AUZJ01000071.1 | ERF59429.1 JB | 4209 [NA] | 1402 [AA] | 42004-46212 | HMPREF1325_0913 | carbamoyl-phosphate synthetase, large subunit, oligomerization domain/diaminopimelate epimerase multi-domain protein |
2580 | AUZJ01000071.1 | ERF59430.1 JB | 831 [NA] | 276 [AA] | 11329-12159 | HMPREF1325_0882 | hypothetical protein |
2581 | AUZJ01000071.1 | ERF59431.1 JB | 777 [NA] | 258 [AA] | 24756-25532 | HMPREF1325_0896 | hypothetical protein |
2582 | AUZJ01000071.1 | ERF59432.1 JB | 669 [NA] | 222 [AA] | 32495-33163 | HMPREF1325_0903 | beta-ketoacyl synthase, N-terminal domain protein |
2583 | AUZJ01000072.1 | ERF59369.1 JB | 1305 [NA] | 434 [AA] | 19891-21195 | HMPREF1325_0335 | glutamate N-acetyltransferase/amino-acid acetyltransferase |
2584 | AUZJ01000072.1 | ERF59370.1 JB | 858 [NA] | 285 [AA] | 14414-15271 | HMPREF1325_0329 | DNA-binding helix-turn-helix protein |
2585 | AUZJ01000072.1 | ERF59371.1 JB | 2112 [NA] | 703 [AA] | 8942-11053 | HMPREF1325_0324 | ABC transporter, permease protein |
2586 | AUZJ01000072.1 | ERF59372.1 JB | 927 [NA] | 308 [AA] | 18889-19815 | HMPREF1325_0334 | acetylglutamate kinase |
2587 | AUZJ01000072.1 | ERF59373.1 JB | 1764 [NA] | 587 [AA] | 431-2194 | HMPREF1325_0319 | ABC transporter, ATP-binding protein |
2588 | AUZJ01000072.1 | ERF59374.1 JB | 1170 [NA] | 389 [AA] | 17695-18864 | HMPREF1325_0333 | transaminase, acetylornithine/succinylornithine family |
2589 | AUZJ01000072.1 | ERF59375.1 JB | 1377 [NA] | 458 [AA] | 2387-3763 | HMPREF1325_0320 | MATE domain protein |
2590 | AUZJ01000072.1 | ERF59376.1 JB | 2901 [NA] | 966 [AA] | 5999-8899 | HMPREF1325_0323 | pyruvate, phosphate dikinase |
2591 | AUZJ01000072.1 | ERF59377.1 JB | 1251 [NA] | 416 [AA] | 15377-16627 | HMPREF1325_0330 | transporter, major facilitator family protein |
2592 | AUZJ01000072.1 | ERF59378.1 JB | 376 [NA] | 125 [AA] | <1-376 | HMPREF1325_0318 | hypothetical protein |
2593 | AUZJ01000072.1 | ERF59379.1 JB | 558 [NA] | 185 [AA] | 13460-14017 | HMPREF1325_0327 | NUDIX domain protein |
2594 | AUZJ01000072.1 | ERF59380.1 JB | 780 [NA] | 259 [AA] | 3802-4581 | HMPREF1325_0321 | transcriptional regulator, TetR family |
2595 | AUZJ01000072.1 | ERF59381.1 JB | 732 [NA] | 243 [AA] | 21371-22102 | HMPREF1325_0336 | aspartate racemase |
2596 | AUZJ01000072.1 | ERF59382.1 JB | 363 [NA] | 120 [AA] | 14059-14421 | HMPREF1325_0328 | hypothetical protein |
2597 | AUZJ01000072.1 | ERF59383.1 JB | 1125 [NA] | 374 [AA] | 11069-12193 | HMPREF1325_0325 | ABC transporter, ATP-binding protein |
2598 | AUZJ01000072.1 | ERF59384.1 JB | 846 [NA] | 281 [AA] | 4900-5745 | HMPREF1325_0322 | hypothetical protein |
2599 | AUZJ01000072.1 | ERF59385.1 JB | 264 [NA] | 87 [AA] | 17347-17610 | HMPREF1325_0332 | hypothetical protein |
2600 | AUZJ01000072.1 | ERF59386.1 JB | 1173 [NA] | 390 [AA] | 12236-13408 | HMPREF1325_0326 | ABC transporter, solute-binding protein |
2601 | AUZJ01000072.1 | ERF59387.1 JB | 600 [NA] | 199 [AA] | 16728-17327 | HMPREF1325_0331 | cysteine-rich secretory family protein |
2602 | AUZJ01000073.1 | ERF59347.1 JB | 1155 [NA] | 384 [AA] | 11667-12821 | HMPREF1325_0371 | NADPH-dependent butanol dehydrogenase |
2603 | AUZJ01000073.1 | ERF59348.1 JB | 897 [NA] | 298 [AA] | 10590-11486 | HMPREF1325_0370 | ATP phosphoribosyltransferase HisG |
2604 | AUZJ01000073.1 | ERF59349.1 JB | 453 [NA] | 150 [AA] | 2224-2676 | HMPREF1325_0363 | hypothetical protein |
2605 | AUZJ01000073.1 | ERF59350.1 JB | 690 [NA] | 229 [AA] | 22272-22961 | HMPREF1325_0375 | calcineurin-like phosphoesterase family protein |
2606 | AUZJ01000073.1 | ERF59351.1 JB | 765 [NA] | 254 [AA] | 27092-27856 | HMPREF1325_0382 | hypothetical protein |
2607 | AUZJ01000073.1 | ERF59352.1 JB | 573 [NA] | 190 [AA] | 25371-25943 | HMPREF1325_0379 | hypothetical protein |
2608 | AUZJ01000073.1 | ERF59353.1 JB | 120 [NA] | 39 [AA] | 2706-2825 | HMPREF1325_0364 | hypothetical protein |
2609 | AUZJ01000073.1 | ERF59354.1 JB | 2361 [NA] | 786 [AA] | 18709-21069 | HMPREF1325_0373 | penicillin-binding protein 1C |
2610 | AUZJ01000073.1 | ERF59355.1 JB | 624 [NA] | 207 [AA] | 9936-10559 | HMPREF1325_0369 | imidazoleglycerol-phosphate dehydratase |
2611 | AUZJ01000073.1 | ERF59356.1 JB | 1317 [NA] | 438 [AA] | 2801-4117 | HMPREF1325_0365 | hypothetical protein |
2612 | AUZJ01000073.1 | ERF59357.1 JB | 843 [NA] | 280 [AA] | 4523-5365 | HMPREF1325_0366 | hypothetical protein |
2613 | AUZJ01000073.1 | ERF59358.1 JB | 1149 [NA] | 382 [AA] | 1079-2227 | HMPREF1325_0362 | hypothetical protein |
2614 | AUZJ01000073.1 | ERF59359.1 JB | 243 [NA] | 80 [AA] | 23915-24157 | HMPREF1325_0376 | hypothetical protein |
2615 | AUZJ01000073.1 | ERF59360.1 JB | 3576 [NA] | 1191 [AA] | 5566-9141 | HMPREF1325_0367 | pyruvate synthase |
2616 | AUZJ01000073.1 | ERF59361.1 JB | 990 [NA] | 329 [AA] | 24231-25220 | HMPREF1325_0378 | CorA-like protein |
2617 | AUZJ01000073.1 | ERF59362.1 JB | 867 [NA] | 288 [AA] | 23089-23955 | HMPREF1325_0377 | sulfatase-modifying factor enzyme 1 |
2618 | AUZJ01000073.1 | ERF59363.1 JB | 708 [NA] | 235 [AA] | 9220-9927 | HMPREF1325_0368 | GDSL-like protein |
2619 | AUZJ01000073.1 | ERF59364.1 JB | 807 [NA] | 268 [AA] | 215-1021 | HMPREF1325_0361 | sigma factor regulatory protein, FecR/PupR family |
2620 | AUZJ01000073.1 | ERF59365.1 JB | 5688 [NA] | 1895 [AA] | 13025-18712 | HMPREF1325_0372 | alpha-2-macroglobulin family protein |
2621 | AUZJ01000073.1 | ERF59366.1 JB | 117 [NA] | 38 [AA] | 26738-26854 | HMPREF1325_0381 | hypothetical protein |
2622 | AUZJ01000073.1 | ERF59367.1 JB | 516 [NA] | 171 [AA] | 26047-26562 | HMPREF1325_0380 | hypothetical protein |
2623 | AUZJ01000073.1 | ERF59368.1 JB | 819 [NA] | 272 [AA] | 21180-21998 | HMPREF1325_0374 | hypothetical protein |
2624 | AUZJ01000074.1 | ERF59344.1 JB | 1482 [NA] | 493 [AA] | 1732-3213 | HMPREF1325_0042 | glycoside hydrolase, family 32, N-terminal domain protein |
2625 | AUZJ01000074.1 | ERF59345.1 JB | 894 [NA] | 297 [AA] | 686-1579 | HMPREF1325_0041 | carbohydrate kinase, PfkB family |
2626 | AUZJ01000074.1 | ERF59346.1 JB | 534 [NA] | 177 [AA] | 3343->3876 | HMPREF1325_0043 | branched-chain amino acid ABC transporter, permease domain protein |