Genome Explorer: Cronobacter sakazakii MOD1_LR654 (SEQF4854.1)
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NCBI Annotation for SEQF4854.1
| Genome selected: Cronobacter sakazakii MOD1_LR654 | |||
| Contigs: | 101 | Bases: | 4431772 bps |
| CDS: | 111 | rRNA: | 7 |
| tmRNA: | 1 | tRNA: | 66 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 4001 | PTPA01000061.1 | PPX82844.1 JB | 699 [NA] | 232 [AA] | 3456-4154 | C3D72_20895 | hypothetical protein |
| 4002 | PTPA01000062.1 | PPX82821.1 JB | 231 [NA] | 76 [AA] | 472-702 | C3D72_20905 | hypothetical protein |
| 4003 | PTPA01000062.1 | PPX82822.1 JB | 732 [NA] | 243 [AA] | 699-1430 | C3D72_20910 | plasmid SOS inhibition protein A |
| 4004 | PTPA01000062.1 | PPX82823.1 JB | 435 [NA] | 144 [AA] | 1427-1861 | C3D72_20915 | conjugation system SOS inhibitor PsiB |
| 4005 | PTPA01000062.1 | PPX82824.1 JB | 2019 [NA] | 672 [AA] | 1899-3917 | C3D72_20920 | nuclease |
| 4006 | PTPA01000062.1 | PPX82825.1 JB | 366 [NA] | 121 [AA] | 3985-4350 | C3D72_20925 | hypothetical protein |
| 4007 | PTPA01000062.1 | PPX82826.1 JB | 267 [NA] | 88 [AA] | 4393-4659 | C3D72_20930 | hypothetical protein |
| 4008 | PTPA01000062.1 | PPX82827.1 JB | 429 [NA] | 142 [AA] | 5632-6060 | C3D72_20935 | antirestriction protein |
| 4009 | PTPA01000062.1 | PPX82828.1 JB | 423 [NA] | 140 [AA] | 6467-6889 | C3D72_20940 | hypothetical protein |
| 4010 | PTPA01000062.1 | PPX82829.1 JB | 222 [NA] | 73 [AA] | 6945-7166 | C3D72_20945 | hypothetical protein |
| 4011 | PTPA01000062.1 | PPX82830.1 JB | 693 [NA] | 230 [AA] | 7163-7855 | C3D72_20950 | DNA methylase |
| 4012 | PTPA01000062.1 | PPX82831.1 JB | 228 [NA] | 75 [AA] | 9342-9569 | C3D72_20960 | hypothetical protein |
| 4013 | PTPA01000062.1 | PPX82832.1 JB | 795 [NA] | 264 [AA] | 10404-11198 | C3D72_20965 | SAM-dependent DNA methyltransferase |
| 4014 | PTPA01000062.1 | PPX82833.1 JB | 276 [NA] | 91 [AA] | 11198-11473 | C3D72_20970 | hypothetical protein |
| 4015 | PTPA01000062.1 | PPX82834.1 JB | 252 [NA] | 83 [AA] | 11852-12103 | C3D72_20975 | hypothetical protein |
| 4016 | PTPA01000062.1 | PPX82835.1 JB | 390 [NA] | 129 [AA] | 12157-12546 | C3D72_20980 | plasmid stability protein |
| 4017 | PTPA01000062.1 | PPX82836.1 JB | 957 [NA] | 318 [AA] | 12551-13507 | C3D72_20985 | recombinase |
| 4018 | PTPA01000062.1 | PPX82837.1 JB | 435 [NA] | 144 [AA] | 13719-14153 | C3D72_20990 | peptidase |
| 4019 | PTPA01000062.1 | PPX82838.1 JB | 1275 [NA] | 424 [AA] | 14153-15427 | C3D72_20995 | translesion error-prone DNA polymerase V subunit UmuC |
| 4020 | PTPA01000062.1 | PPX82839.1 JB | 747 [NA] | 248 [AA] | 15871-16617 | C3D72_21000 | replication initiation protein RepE |
| 4021 | PTPA01000062.1 | PPX82840.1 JB | 180 [NA] | 59 [AA] | 252-431 | C3D72_20900 | hypothetical protein |
| 4022 | PTPA01000063.1 | PPX82802.1 JB | 1236 [NA] | 411 [AA] | 183-1418 | C3D72_21005 | ISL3 family transposase |
| 4023 | PTPA01000063.1 | PPX82803.1 JB | 927 [NA] | 308 [AA] | 1588-2514 | C3D72_21010 | LysR family transcriptional regulator |
| 4024 | PTPA01000063.1 | PPX82804.1 JB | 789 [NA] | 262 [AA] | 2644-3432 | C3D72_21015 | alpha/beta hydrolase |
| 4025 | PTPA01000063.1 | PPX82805.1 JB | 219 [NA] | 72 [AA] | 3639-3857 | C3D72_21020 | hypothetical protein |
| 4026 | PTPA01000063.1 | PPX82806.1 JB | 768 [NA] | 255 [AA] | 4101-4868 | C3D72_21025 | type I methionyl aminopeptidase |
| 4027 | PTPA01000063.1 | PPX82807.1 JB | 213 [NA] | 70 [AA] | 4865-5077 | C3D72_21030 | hypothetical protein |
| 4028 | PTPA01000063.1 | PPX82808.1 JB | 393 [NA] | 130 [AA] | 5320-5712 | C3D72_21035 | nuclear transport factor 2 family protein |
| 4029 | PTPA01000063.1 | PPX82809.1 JB | 918 [NA] | 305 [AA] | 5827-6744 | C3D72_21040 | LysR family transcriptional regulator |
| 4030 | PTPA01000064.1 | PPX82743.1 JB | 145 [NA] | 48 [AA] | <1-145 | C3D72_21045 | IS3 family transposase |
| 4031 | PTPA01000064.1 | PPX82744.1 JB | 1122 [NA] | 373 [AA] | 251-1371 | C3D72_21050 | IS3-like element ISKpn34 family transposase |
| 4032 | PTPA01000065.1 | PPX82563.1 JB | 345 [NA] | 114 [AA] | 289-633 | C3D72_21055 | plasmid mobilization relaxosome protein MobC |
| 4033 | PTPA01000065.1 | PPX82564.1 JB | 857 [NA] | 286 [AA] | 623->1479 | C3D72_21060 | nuclease |
| 4034 | PTPA01000066.1 | PPX82439.1 JB | 192 [NA] | 63 [AA] | 52-243 | C3D72_21065 | hypothetical protein |
| 4035 | PTPA01000066.1 | PPX82440.1 JB | 279 [NA] | 92 [AA] | 227-505 | C3D72_21070 | hypothetical protein |
| 4036 | PTPA01000066.1 | PPX82441.1 JB | 573 [NA] | 190 [AA] | 505-1077 | C3D72_21075 | hypothetical protein |
| 4037 | PTPA01000066.1 | PPX82442.1 JB | 330 [NA] | 109 [AA] | 1983-2312 | C3D72_21080 | hypothetical protein |
| 4038 | PTPA01000066.1 | PPX82443.1 JB | 1005 [NA] | 334 [AA] | 2315-3319 | C3D72_21085 | DUF4263 domain-containing protein |
| 4039 | PTPA01000066.1 | PPX82444.1 JB | 555 [NA] | 184 [AA] | 5191-5745 | C3D72_21090 | recombinase family protein |
| 4040 | PTPA01000066.1 | PPX82445.1 JB | 336 [NA] | 111 [AA] | 5975-6310 | C3D72_21095 | hypothetical protein |
| 4041 | PTPA01000066.1 | PPX82446.1 JB | 924 [NA] | 307 [AA] | 6601-7524 | C3D72_21100 | hypothetical protein |
| 4042 | PTPA01000066.1 | PPX82447.1 JB | 801 [NA] | 266 [AA] | 7723-8523 | C3D72_21105 | hypothetical protein |
| 4043 | PTPA01000066.1 | PPX82448.1 JB | 939 [NA] | 312 [AA] | 8554->9493 | C3D72_21110 | recombinase family protein |
| 4044 | PTPA01000067.1 | PPX82438.1 JB | 263 [NA] | 87 [AA] | 650->912 | C3D72_21115 | hypothetical protein |
| 4045 | PTPA01000068.1 | PPX82436.1 JB | 447 [NA] | 148 [AA] | <1-447 | C3D72_21120 | chloride channel protein |
| 4046 | PTPA01000068.1 | PPX82437.1 JB | 144 [NA] | 48 [AA] | 606->749 | C3D72_21125 | transcriptional regulator, MerR family protein |
| 4047 | PTPA01000069.1 | PPX82421.1 JB | 91 [NA] | 30 [AA] | <1-91 | C3D72_21130 | glycine/betaine ABC transporter permease |
| 4048 | PTPA01000069.1 | PPX82422.1 JB | 311 [NA] | 103 [AA] | 420->730 | C3D72_21135 | hypothetical protein |
| 4049 | PTPA01000070.1 | PPX82091.1 JB | 654 [NA] | 217 [AA] | 1422-2075 | C3D72_21145 | type VI secretion system protein ImpK |
| 4050 | PTPA01000070.1 | PPX82092.1 JB | 1341 [NA] | 446 [AA] | 2072-3412 | C3D72_21150 | type VI secretion system baseplate subunit TssK |
| 4051 | PTPA01000071.1 | PPX81965.1 JB | 1376 [NA] | 459 [AA] | <1-1376 | C3D72_21160 | hypothetical protein |
| 4052 | PTPA01000071.1 | PPX81966.1 JB | 687 [NA] | 228 [AA] | 1378-2064 | C3D72_21165 | DotU family type IV/VI secretion system protein |
| 4053 | PTPA01000071.1 | PPX81967.1 JB | 1350 [NA] | 449 [AA] | 2061-3410 | C3D72_21170 | type VI secretion system baseplate subunit TssK |
| 4054 | PTPA01000071.1 | PPX81968.1 JB | 573 [NA] | 190 [AA] | 3425->3998 | C3D72_21175 | type VI secretion system contractile sheath large subunit |
| 4055 | PTPA01000072.1 | PPX81956.1 JB | 375 [NA] | 124 [AA] | 898-1272 | C3D72_21185 | hypothetical protein |
| 4056 | PTPA01000072.1 | PPX81957.1 JB | 2541 [NA] | 846 [AA] | 1575-4115 | C3D72_21190 | hypothetical protein |
| 4057 | PTPA01000072.1 | PPX81958.1 JB | 1071 [NA] | 356 [AA] | 4112-5182 | C3D72_21195 | hypothetical protein |
| 4058 | PTPA01000072.1 | PPX81959.1 JB | 606 [NA] | 201 [AA] | 5192-5797 | C3D72_21200 | DUF3540 domain-containing protein |
| 4059 | PTPA01000072.1 | PPX81960.1 JB | 393 [NA] | 130 [AA] | 5803-6195 | C3D72_21205 | DUF4150 domain-containing protein |
| 4060 | PTPA01000072.1 | PPX81961.1 JB | 423 [NA] | 140 [AA] | 6835-7257 | C3D72_21215 | hypothetical protein |
| 4061 | PTPA01000072.1 | PPX81962.1 JB | 735 [NA] | 245 [AA] | 7372->8106 | C3D72_21220 | type VI secretion system tip protein VgrG |
| 4062 | PTPA01000072.1 | PPX81963.1 JB | 843 [NA] | 280 [AA] | 46-888 | C3D72_21180 | VgrG protein |
| 4063 | PTPA01000072.1 | PPX81964.1 JB | 363 [NA] | 120 [AA] | 6460-6822 | C3D72_21210 | hypothetical protein |
| 4064 | PTPA01000073.1 | PPX81955.1 JB | 686 [NA] | 229 [AA] | <1->686 | C3D72_21225 | type VI secretion system tip protein VgrG |
| 4065 | PTPA01000074.1 | PPX81940.1 JB | 780 [NA] | 259 [AA] | 612-1391 | C3D72_21235 | gamma-glutamyl-gamma-aminobutyrate hydrolase |
| 4066 | PTPA01000074.1 | PPX81941.1 JB | 1296 [NA] | 431 [AA] | 1658-2953 | C3D72_21240 | 4-aminobutyrate--2-oxoglutarate transaminase |
| 4067 | PTPA01000074.1 | PPX81942.1 JB | 1362 [NA] | 453 [AA] | 3142-4503 | C3D72_21250 | APC family permease |
| 4068 | PTPA01000074.1 | PPX81943.1 JB | 1152 [NA] | 383 [AA] | 6281-7432 | C3D72_21260 | acyltransferase |
| 4069 | PTPA01000074.1 | PPX81944.1 JB | 1152 [NA] | 383 [AA] | 7691-8842 | C3D72_21265 | serine-type D-Ala-D-Ala carboxypeptidase DacD |
| 4070 | PTPA01000074.1 | PPX81945.1 JB | 474 [NA] | 157 [AA] | 8930-9403 | C3D72_21270 | DNA gyrase inhibitor SbmC |
| 4071 | PTPA01000074.1 | PPX81946.1 JB | 1059 [NA] | 352 [AA] | 9604-10662 | C3D72_21275 | FUSC family protein |
| 4072 | PTPA01000074.1 | PPX81947.1 JB | 339 [NA] | 112 [AA] | 10831-11169 | C3D72_21280 | hypothetical protein |
| 4073 | PTPA01000074.1 | PPX81948.1 JB | 1794 [NA] | 597 [AA] | 11349-13142 | C3D72_21285 | hypothetical protein |
| 4074 | PTPA01000074.1 | PPX81949.1 JB | 549 [NA] | 182 [AA] | 13142-13690 | C3D72_21290 | hypothetical protein |
| 4075 | PTPA01000074.1 | PPX81950.1 JB | 525 [NA] | 174 [AA] | 13898-14422 | C3D72_21295 | hypothetical protein |
| 4076 | PTPA01000074.1 | PPX81951.1 JB | 1473 [NA] | 490 [AA] | 15064-16536 | C3D72_21305 | FMN/FAD transporter |
| 4077 | PTPA01000074.1 | PPX81952.1 JB | 2331 [NA] | 776 [AA] | 16930-19260 | C3D72_21310 | type VI secretion system tip protein VgrG |
| 4078 | PTPA01000074.1 | PPX81953.1 JB | 63 [NA] | 20 [AA] | 3090-3152 | C3D72_21245 | membrane protein YoeI |
| 4079 | PTPA01000074.1 | PPX81954.1 JB | 1428 [NA] | 475 [AA] | 4776-6203 | C3D72_21255 | exodeoxyribonuclease I |
| 4080 | PTPA01000075.1 | PPX81937.1 JB | 705 [NA] | 234 [AA] | 64-768 | C3D72_21320 | IS6 family transposase IS15DIV |
| 4081 | PTPA01000076.1 | PPX81414.1 JB | 1205 [NA] | 402 [AA] | 103->1307 | C3D72_21325 | elongation factor Tu |
| 4082 | PTPA01000077.1 | PPX81050.1 JB | 727 [NA] | 242 [AA] | <1-727 | C3D72_21330 | D-mannonate oxidoreductase |
| 4083 | PTPA01000077.1 | PPX81051.1 JB | 444 [NA] | 147 [AA] | 893-1336 | C3D72_21335 | MFS transporter |
| 4084 | PTPA01000078.1 | PPX81048.1 JB | 698 [NA] | 233 [AA] | <1-698 | C3D72_21340 | MFS transporter |
| 4085 | PTPA01000078.1 | PPX81049.1 JB | 96 [NA] | 31 [AA] | 756->853 | C3D72_21345 | starvation-sensing protein |
| 4086 | PTPA01000079.1 | PPX81041.1 JB | 288 [NA] | 95 [AA] | 133-420 | C3D72_21355 | mRNA interferase RelE |
| 4087 | PTPA01000079.1 | PPX81042.1 JB | 240 [NA] | 79 [AA] | 420-659 | C3D72_21360 | antitoxin RelB |
| 4088 | PTPA01000079.1 | PPX81043.1 JB | 306 [NA] | 101 [AA] | 684-989 | C3D72_21365 | hypothetical protein |
| 4089 | PTPA01000079.1 | PPX81044.1 JB | 333 [NA] | 110 [AA] | 1192-1524 | C3D72_21370 | protein flxA |
| 4090 | PTPA01000079.1 | PPX81045.1 JB | 123 [NA] | 40 [AA] | 1794-1916 | C3D72_21375 | plasmid mobilization protein |
| 4091 | PTPA01000079.1 | PPX81046.1 JB | 1341 [NA] | 446 [AA] | 1961-3301 | C3D72_21380 | transposase |
| 4092 | PTPA01000079.1 | PPX81047.1 JB | 62 [NA] | 20 [AA] | <1-62 | C3D72_21350 | small toxic polypeptide |
| 4093 | PTPA01000080.1 | PPX81040.1 JB | 547 [NA] | 182 [AA] | 1284->1830 | C3D72_21390 | dimethylsulfoxide reductase, chain B |
| 4094 | PTPA01000081.1 | PPX81039.1 JB | 464 [NA] | 155 [AA] | 55->518 | C3D72_21395 | dimethylsulfoxide reductase |
| 4095 | PTPA01000082.1 | PPX81036.1 JB | 543 [NA] | 180 [AA] | 556-1098 | C3D72_21405 | formate hydrogenlyase complex iron-sulfur subunit |
| 4096 | PTPA01000082.1 | PPX81037.1 JB | 768 [NA] | 255 [AA] | 1095-1862 | C3D72_21410 | NADH-quinone oxidoreductase subunit NuoB |
| 4097 | PTPA01000082.1 | PPX81038.1 JB | 408 [NA] | 135 [AA] | 1859-2266 | C3D72_21415 | formate hydrogenlyase maturation protein HycH |
| 4098 | PTPA01000083.1 | PPX81035.1 JB | 1406 [NA] | 469 [AA] | <1->1406 | C3D72_21425 | type IV secretion protein Rhs |
| 4099 | PTPA01000084.1 | PPX81033.1 JB | 216 [NA] | 71 [AA] | <1-217 | C3D72_21430 | osmoprotectant ABC transporter permease OsmW |
| 4100 | PTPA01000084.1 | PPX81034.1 JB | 443 [NA] | 148 [AA] | 217->659 | C3D72_21435 | osmoprotectant ABC transporter ATP-binding protein OsmV |
| 4101 | PTPA01000085.1 | PPX81030.1 JB | 924 [NA] | 307 [AA] | 97-1020 | C3D72_21440 | cation transporter |
| 4102 | PTPA01000085.1 | PPX81031.1 JB | 825 [NA] | 274 [AA] | 2268->3092 | C3D72_21450 | IS110 family transposase |
| 4103 | PTPA01000085.1 | PPX81032.1 JB | 573 [NA] | 190 [AA] | 1220-1792 | C3D72_21445 | cytochrome b/b6 domain-containing protein |
| 4104 | PTPA01000086.1 | PPX81027.1 JB | 627 [NA] | 208 [AA] | 321-947 | C3D72_21455 | cobyrinic acid ac-diamide synthase |
| 4105 | PTPA01000086.1 | PPX81028.1 JB | 297 [NA] | 98 [AA] | 944-1240 | C3D72_21460 | hypothetical protein |
| 4106 | PTPA01000086.1 | PPX81029.1 JB | 534 [NA] | 177 [AA] | 1345-1878 | C3D72_21465 | hypothetical protein |
| 4107 | PTPA01000087.1 | PPX81024.1 JB | 1074 [NA] | 357 [AA] | <1-1074 | C3D72_21470 | hypothetical protein |
| 4108 | PTPA01000087.1 | PPX81025.1 JB | 405 [NA] | 134 [AA] | 1059-1463 | C3D72_21475 | SMI1/KNR4 family protein |
| 4109 | PTPA01000087.1 | PPX81026.1 JB | 116 [NA] | 39 [AA] | 1683->1798 | C3D72_21480 | hypothetical protein |
| 4110 | PTPA01000089.1 | PPX80717.1 JB | 597 [NA] | 198 [AA] | <1-597 | C3D72_21495 | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
| 4111 | PTPA01000089.1 | PPX80718.1 JB | 888 [NA] | 295 [AA] | 848-1735 | C3D72_21500 | NAD(P)/FAD-dependent oxidoreductase |
| 4112 | PTPA01000089.1 | PPX80719.1 JB | 429 [NA] | 142 [AA] | 1871-2299 | C3D72_21505 | Rrf2 family transcriptional regulator |
| 4113 | PTPA01000089.1 | PPX80720.1 JB | 258 [NA] | 85 [AA] | 2391-2648 | C3D72_21510 | transposase |
| 4114 | PTPA01000090.1 | PPX80706.1 JB | 348 [NA] | 115 [AA] | 1212-1559 | C3D72_21520 | hypothetical protein |
| 4115 | PTPA01000090.1 | PPX80707.1 JB | 465 [NA] | 154 [AA] | 1797->2263 | C3D72_21525 | TetR family transcriptional regulator |
| 4116 | PTPA01000090.1 | PPX80708.1 JB | 894 [NA] | 298 [AA] | <1-894 | C3D72_21515 | oxidoreductase |
| 4117 | PTPA01000091.1 | PPX80704.1 JB | 1104 [NA] | 367 [AA] | 169-1272 | C3D72_21530 | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
| 4118 | PTPA01000091.1 | PPX80705.1 JB | 330 [NA] | 109 [AA] | 1482->1813 | C3D72_21535 | DUF1264 domain-containing protein |
| 4119 | PTPA01000092.1 | PPX80689.1 JB | 2039 [NA] | 680 [AA] | <1->2040 | C3D72_21540 | type IV secretion protein Rhs |
| 4120 | PTPA01000094.1 | PPX80673.1 JB | 141 [NA] | 46 [AA] | <1-142 | C3D72_21550 | GntR family transcriptional regulator |
| 4121 | PTPA01000094.1 | PPX80674.1 JB | 894 [NA] | 297 [AA] | 182-1075 | C3D72_21555 | hypothetical protein |
| 4122 | PTPA01000094.1 | PPX80675.1 JB | 204 [NA] | 67 [AA] | 1200-1403 | C3D72_21560 | putative selenium delivery protein YdfZ |
| 4123 | PTPA01000095.1 | PPX80660.1 JB | 168 [NA] | 55 [AA] | <1-170 | C3D72_21565 | glycine/betaine ABC transporter permease |
| 4124 | PTPA01000095.1 | PPX80661.1 JB | 906 [NA] | 301 [AA] | 187-1092 | C3D72_21570 | osmoprotectant ABC transporter substrate-binding protein OsmX |
| 4125 | PTPA01000096.1 | PPX80352.1 JB | 747 [NA] | 248 [AA] | 724-1470 | C3D72_21585 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG |
| 4126 | PTPA01000096.1 | PPX80353.1 JB | 308 [NA] | 103 [AA] | 1559->1866 | C3D72_21590 | GntR family transcriptional regulator |
| 4127 | PTPA01000096.1 | PPX80354.1 JB | 564 [NA] | 188 [AA] | <1-564 | C3D72_21580 | dipeptidyl carboxypeptidase II |
| 4128 | PTPA01000097.1 | PPX80350.1 JB | 519 [NA] | 172 [AA] | <1-520 | C3D72_21595 | NAD(P)-dependent oxidoreductase |
| 4129 | PTPA01000097.1 | PPX80351.1 JB | 780 [NA] | 259 [AA] | 504-1283 | C3D72_21600 | gamma-glutamyl-gamma-aminobutyrate hydrolase |
| 4130 | PTPA01000098.1 | PPX80349.1 JB | 423 [NA] | 141 [AA] | <1->424 | C3D72_21610 | urea carboxylase |
| 4131 | PTPA01000099.1 | PPX80332.1 JB | 223 [NA] | 74 [AA] | <1-223 | C3D72_21615 | Urea carboxylase |
| 4132 | PTPA01000099.1 | PPX80333.1 JB | 204 [NA] | 67 [AA] | 234-437 | C3D72_21620 | allophanate hydrolase |
| 4133 | PTPA01000101.1 | PPX80319.1 JB | 198 [NA] | 66 [AA] | <1-198 | C3D72_21630 | NAD(P)-dependent oxidoreductase |
| 4134 | PTPA01000101.1 | PPX80320.1 JB | 463 [NA] | 154 [AA] | 575->1037 | C3D72_21640 | ATP phosphoribosyltransferase |
| 4135 | PTPA01000101.1 | PPX80321.1 JB | 51 [NA] | 16 [AA] | 379-429 | C3D72_21635 | his operon leader peptide |