Genome Explorer: Bifidobacterium dentium BRDF 5 (SEQF7217.1)
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NCBI Annotation for SEQF7217.1
| Genome selected: Bifidobacterium dentium BRDF 5 | |||
| Contigs: | 19 | Bases: | 2630103 bps |
| CDS: | 56 | rRNA: | 7 |
| tmRNA: | 1 | tRNA: | 53 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | VYSF01000009.1 | NEG54076.1 JB | 900 [NA] | 299 [AA] | 54531-55430 | F6S92_10530 | serine/threonine-protein phosphatase |
| 2002 | VYSF01000009.1 | NEG54077.1 JB | 741 [NA] | 246 [AA] | 55427-56167 | F6S92_10535 | hypothetical protein |
| 2003 | VYSF01000009.1 | NEG54078.1 JB | 600 [NA] | 199 [AA] | 56298-56897 | F6S92_10540 | FHA domain-containing protein |
| 2004 | VYSF01000009.1 | NEG54079.1 JB | 1113 [NA] | 370 [AA] | 57104-58216 | F6S92_10545 | hypothetical protein |
| 2005 | VYSF01000009.1 | NEG54080.1 JB | 4014 [NA] | 1337 [AA] | 58325-62338 | F6S92_10550 | DNA-directed RNA polymerase subunit beta' |
| 2006 | VYSF01000009.1 | NEG54081.1 JB | 3561 [NA] | 1186 [AA] | 62437-65997 | F6S92_10555 | DNA-directed RNA polymerase subunit beta |
| 2007 | VYSF01000009.1 | NEG54082.1 JB | 654 [NA] | 217 [AA] | 66238-66891 | F6S92_10560 | hypothetical protein |
| 2008 | VYSF01000009.1 | NEG54083.1 JB | 900 [NA] | 299 [AA] | 66971-67870 | F6S92_10565 | A/G-specific adenine glycosylase |
| 2009 | VYSF01000009.1 | NEG54084.1 JB | 600 [NA] | 199 [AA] | 68050-68649 | F6S92_10570 | tRNA (cytidine(34)-2'-O)-methyltransferase |
| 2010 | VYSF01000009.1 | NEG54085.1 JB | 1365 [NA] | 454 [AA] | 68720-70084 | F6S92_10575 | PFL family protein |
| 2011 | VYSF01000009.1 | NEG54086.1 JB | 273 [NA] | 90 [AA] | 70107-70379 | F6S92_10580 | ACT domain-containing protein |
| 2012 | VYSF01000009.1 | NEG54087.1 JB | 1443 [NA] | 480 [AA] | 70540-71982 | F6S92_10585 | multidrug efflux MFS transporter |
| 2013 | VYSF01000009.1 | NEG54088.1 JB | 1242 [NA] | 413 [AA] | 72212-73453 | F6S92_10590 | ROK family protein |
| 2014 | VYSF01000009.1 | NEG54089.1 JB | 699 [NA] | 232 [AA] | 73653-74351 | F6S92_10595 | ribulose phosphate epimerase |
| 2015 | VYSF01000009.1 | NEG54090.1 JB | 999 [NA] | 332 [AA] | 74530-75528 | F6S92_10600 | allose kinase |
| 2016 | VYSF01000009.1 | NEG54091.1 JB | 1200 [NA] | 399 [AA] | 75657-76856 | F6S92_10605 | MFS transporter |
| 2017 | VYSF01000009.1 | NEG54092.1 JB | 1251 [NA] | 416 [AA] | 77135-78385 | F6S92_10610 | galactokinase |
| 2018 | VYSF01000009.1 | NEG54093.1 JB | 1251 [NA] | 416 [AA] | 78417-79667 | F6S92_10615 | galactose-1-phosphate uridylyltransferase |
| 2019 | VYSF01000009.1 | NEG54094.1 JB | 804 [NA] | 267 [AA] | 79673-80476 | F6S92_10620 | DeoR/GlpR transcriptional regulator |
| 2020 | VYSF01000009.1 | NEG54095.1 JB | 804 [NA] | 267 [AA] | 80895-81698 | F6S92_10625 | polyprenol monophosphomannose synthase |
| 2021 | VYSF01000010.1 | NEG54096.1 JB | 765 [NA] | 254 [AA] | 138-902 | F6S92_10630 | NAD-dependent deacetylase |
| 2022 | VYSF01000010.1 | NEG54097.1 JB | 1266 [NA] | 421 [AA] | 1234-2499 | F6S92_10635 | threonine ammonia-lyase |
| 2023 | VYSF01000010.1 | NEG54098.1 JB | 1821 [NA] | 606 [AA] | 2668-4488 | F6S92_10640 | alpha-glucosidase |
| 2024 | VYSF01000010.1 | NEG54099.1 JB | 1731 [NA] | 576 [AA] | 4607-6337 | F6S92_10645 | glycoside hydrolase family 13 protein |
| 2025 | VYSF01000010.1 | NEG54100.1 JB | 825 [NA] | 274 [AA] | 6344-7168 | F6S92_10650 | carbohydrate ABC transporter permease |
| 2026 | VYSF01000010.1 | NEG54101.1 JB | 864 [NA] | 287 [AA] | 7175-8038 | F6S92_10655 | sugar ABC transporter permease |
| 2027 | VYSF01000010.1 | NEG54102.1 JB | 1326 [NA] | 441 [AA] | 8212-9537 | F6S92_10660 | extracellular solute-binding protein |
| 2028 | VYSF01000010.1 | NEG54103.1 JB | 1020 [NA] | 339 [AA] | 9865-10884 | F6S92_10665 | LacI family transcriptional regulator |
| 2029 | VYSF01000010.1 | NEG54104.1 JB | 876 [NA] | 291 [AA] | 11112-11987 | F6S92_10670 | carbohydrate ABC transporter permease |
| 2030 | VYSF01000010.1 | NEG54105.1 JB | 915 [NA] | 304 [AA] | 12008-12922 | F6S92_10675 | sugar ABC transporter permease |
| 2031 | VYSF01000010.1 | NEG54106.1 JB | 1293 [NA] | 430 [AA] | 12937-14229 | F6S92_10680 | carbohydrate ABC transporter substrate-binding protein |
| 2032 | VYSF01000010.1 | NEG54107.1 JB | 1203 [NA] | 400 [AA] | 14412-15614 | F6S92_10685 | ROK family protein |
| 2033 | VYSF01000010.1 | NEG54108.1 JB | 2295 [NA] | 764 [AA] | 16063-18357 | F6S92_10690 | alpha-galactosidase |
| 2034 | VYSF01000010.1 | NEG54109.1 JB | 456 [NA] | 151 [AA] | 18515-18970 | F6S92_10695 | nucleoside deaminase |
| 2035 | VYSF01000010.1 | NEG54110.1 JB | 2073 [NA] | 690 [AA] | 19052-21124 | F6S92_10700 | Na+/H+ antiporter |
| 2036 | VYSF01000010.1 | NEG54111.1 JB | 759 [NA] | 252 [AA] | 21411-22169 | F6S92_10710 | esterase |
| 2037 | VYSF01000010.1 | NEG54112.1 JB | 582 [NA] | 193 [AA] | 22280-22861 | F6S92_10715 | dCTP deaminase |
| 2038 | VYSF01000010.1 | NEG54113.1 JB | 2991 [NA] | 996 [AA] | 23015-26005 | F6S92_10720 | cation-translocating P-type ATPase |
| 2039 | VYSF01000010.1 | NEG54114.1 JB | 990 [NA] | 329 [AA] | 26787-27776 | F6S92_10725 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB |
| 2040 | VYSF01000010.1 | NEG54115.1 JB | 1413 [NA] | 470 [AA] | 27852-29264 | F6S92_10730 | DUF4032 domain-containing protein |
| 2041 | VYSF01000010.1 | NEG54116.1 JB | 1128 [NA] | 375 [AA] | 29489-30616 | F6S92_10735 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC |
| 2042 | VYSF01000010.1 | NEG54117.1 JB | 1374 [NA] | 457 [AA] | 31649-33022 | F6S92_10745 | GHKL domain-containing protein |
| 2043 | VYSF01000010.1 | NEG54118.1 JB | 408 [NA] | 135 [AA] | 33196-33603 | F6S92_10750 | hypothetical protein |
| 2044 | VYSF01000010.1 | NEG54119.1 JB | 1308 [NA] | 435 [AA] | 33530-34837 | F6S92_10755 | chloride channel protein |
| 2045 | VYSF01000010.1 | NEG54120.1 JB | 633 [NA] | 210 [AA] | 35105-35737 | F6S92_10760 | sugar O-acetyltransferase |
| 2046 | VYSF01000010.1 | NEG54121.1 JB | 1197 [NA] | 398 [AA] | 35893-37089 | F6S92_10765 | pyridoxal phosphate-dependent aminotransferase |
| 2047 | VYSF01000010.1 | NEG54122.1 JB | 930 [NA] | 309 [AA] | 37447-38376 | F6S92_10770 | alpha/beta hydrolase |
| 2048 | VYSF01000010.1 | NEG54123.1 JB | 1182 [NA] | 393 [AA] | 38457-39638 | F6S92_10775 | MFS transporter |
| 2049 | VYSF01000010.1 | NEG54124.1 JB | 972 [NA] | 323 [AA] | 39635-40606 | F6S92_10780 | SorC family transcriptional regulator |
| 2050 | VYSF01000010.1 | NEG54125.1 JB | 1926 [NA] | 641 [AA] | 40846-42771 | F6S92_10785 | alpha/beta hydrolase |
| 2051 | VYSF01000010.1 | NEG54126.1 JB | 573 [NA] | 190 [AA] | 42942-43514 | F6S92_10790 | PTS cellobiose transporter subunit IIC |
| 2052 | VYSF01000010.1 | NEG54127.1 JB | 2430 [NA] | 809 [AA] | 43507-45936 | F6S92_10795 | glycosyl hydrolase |
| 2053 | VYSF01000010.1 | NEG54128.1 JB | 666 [NA] | 221 [AA] | 49429-50094 | F6S92_10805 | phosphatase PAP2 family protein |
| 2054 | VYSF01000011.1 | NEG54129.1 JB | 636 [NA] | 211 [AA] | 211-846 | F6S92_10810 | ABC transporter ATP-binding protein |
| 2055 | VYSF01000011.1 | NEG54130.1 JB | 663 [NA] | 220 [AA] | 874-1536 | F6S92_10815 | hypothetical protein |
| 2056 | VYSF01000011.1 | NEG54131.1 JB | 693 [NA] | 230 [AA] | 1533-2225 | F6S92_10820 | beta-carotene 15,15'-monooxygenase |
| 2057 | VYSF01000011.1 | NEG54132.1 JB | 873 [NA] | 290 [AA] | 2218-3090 | F6S92_10825 | ABC transporter permease |
| 2058 | VYSF01000011.1 | NEG54133.1 JB | 342 [NA] | 113 [AA] | 3160-3501 | F6S92_10830 | hypothetical protein |
| 2059 | VYSF01000011.1 | NEG54134.1 JB | 657 [NA] | 218 [AA] | 3758-4414 | F6S92_10835 | response regulator transcription factor |
| 2060 | VYSF01000011.1 | NEG54135.1 JB | 1122 [NA] | 373 [AA] | 4523-5644 | F6S92_10840 | histidine kinase |
| 2061 | VYSF01000011.1 | NEG54136.1 JB | 705 [NA] | 234 [AA] | 5794-6498 | F6S92_10845 | endonuclease NucS |
| 2062 | VYSF01000011.1 | NEG54137.1 JB | 282 [NA] | 93 [AA] | 6613-6894 | F6S92_10850 | F0F1 ATP synthase subunit epsilon |
| 2063 | VYSF01000011.1 | NEG54138.1 JB | 1485 [NA] | 494 [AA] | 6891-8375 | F6S92_10855 | F0F1 ATP synthase subunit beta |
| 2064 | VYSF01000011.1 | NEG54139.1 JB | 921 [NA] | 306 [AA] | 8384-9304 | F6S92_10860 | F0F1 ATP synthase subunit gamma |
| 2065 | VYSF01000011.1 | NEG54140.1 JB | 1629 [NA] | 542 [AA] | 9308-10936 | F6S92_10865 | F0F1 ATP synthase subunit alpha |
| 2066 | VYSF01000011.1 | NEG54141.1 JB | 828 [NA] | 275 [AA] | 11010-11837 | F6S92_10870 | F0F1 ATP synthase subunit delta |
| 2067 | VYSF01000011.1 | NEG54142.1 JB | 522 [NA] | 173 [AA] | 11868-12389 | F6S92_10875 | F0F1 ATP synthase subunit B |
| 2068 | VYSF01000011.1 | NEG54143.1 JB | 228 [NA] | 75 [AA] | 12446-12673 | F6S92_10880 | ATP synthase F0 subunit C |
| 2069 | VYSF01000011.1 | NEG54144.1 JB | 810 [NA] | 269 [AA] | 12728-13537 | F6S92_10885 | F0F1 ATP synthase subunit A |
| 2070 | VYSF01000011.1 | NEG54145.1 JB | 1035 [NA] | 344 [AA] | 13961-14995 | F6S92_10890 | homoserine O-succinyltransferase |
| 2071 | VYSF01000011.1 | NEG54146.1 JB | 822 [NA] | 273 [AA] | 15330-16151 | F6S92_10900 | site-specific integrase |
| 2072 | VYSF01000011.1 | NEG54147.1 JB | 156 [NA] | 51 [AA] | 16148-16303 | F6S92_10905 | LPXTG cell wall anchor domain-containing protein |
| 2073 | VYSF01000011.1 | NEG54148.1 JB | 309 [NA] | 102 [AA] | 17954-18262 | F6S92_10915 | 4-hydroxybenzoyl-CoA reductase |
| 2074 | VYSF01000011.1 | NEG54149.1 JB | 330 [NA] | 109 [AA] | 18427-18756 | F6S92_10920 | ABC transporter permease |
| 2075 | VYSF01000011.1 | NEG54150.1 JB | 540 [NA] | 179 [AA] | 18766-19305 | F6S92_10925 | hypothetical protein |
| 2076 | VYSF01000011.1 | NEG54151.1 JB | 321 [NA] | 106 [AA] | 20722-21042 | F6S92_10935 | hypothetical protein |
| 2077 | VYSF01000011.1 | NEG54152.1 JB | 1446 [NA] | 481 [AA] | 21029-22474 | F6S92_10940 | hypothetical protein |
| 2078 | VYSF01000011.1 | NEG54153.1 JB | 711 [NA] | 236 [AA] | 22471-23181 | F6S92_10945 | ABC transporter ATP-binding protein |
| 2079 | VYSF01000011.1 | NEG54154.1 JB | 297 [NA] | 98 [AA] | 23248-23544 | F6S92_10950 | hypothetical protein |
| 2080 | VYSF01000011.1 | NEG54155.1 JB | 672 [NA] | 223 [AA] | 23653-24324 | F6S92_10955 | response regulator transcription factor |
| 2081 | VYSF01000011.1 | NEG54156.1 JB | 1191 [NA] | 396 [AA] | 24294-25484 | F6S92_10960 | histidine kinase |
| 2082 | VYSF01000012.1 | NEG54157.1 JB | 252 [NA] | 83 [AA] | 290-541 | F6S92_10965 | hypothetical protein |
| 2083 | VYSF01000012.1 | NEG54158.1 JB | 780 [NA] | 259 [AA] | 717-1496 | F6S92_10970 | NADPH-dependent oxidoreductase |
| 2084 | VYSF01000012.1 | NEG54159.1 JB | 1302 [NA] | 433 [AA] | 1545-2846 | F6S92_10975 | sensor histidine kinase |
| 2085 | VYSF01000012.1 | NEG54160.1 JB | 717 [NA] | 238 [AA] | 2843-3559 | F6S92_10980 | response regulator transcription factor |
| 2086 | VYSF01000012.1 | NEG54161.1 JB | 3102 [NA] | 1033 [AA] | 3693-6794 | F6S92_10985 | beta-glucosidase |
| 2087 | VYSF01000012.1 | NEG54162.1 JB | 387 [NA] | 128 [AA] | 6825-7211 | F6S92_10990 | hypothetical protein |
| 2088 | VYSF01000012.1 | NEG54163.1 JB | 2418 [NA] | 805 [AA] | 7298-9715 | F6S92_10995 | glycoside hydrolase family 2 protein |
| 2089 | VYSF01000012.1 | NEG54164.1 JB | 591 [NA] | 196 [AA] | 9715-10305 | F6S92_11000 | hypothetical protein |
| 2090 | VYSF01000012.1 | NEG54165.1 JB | 369 [NA] | 122 [AA] | 10314-10682 | F6S92_11005 | DUF4235 domain-containing protein |
| 2091 | VYSF01000012.1 | NEG54166.1 JB | 705 [NA] | 234 [AA] | 10823-11527 | F6S92_11010 | histidine phosphatase family protein |
| 2092 | VYSF01000012.1 | NEG54167.1 JB | 1032 [NA] | 343 [AA] | 11683-12714 | F6S92_11015 | LacI family transcriptional regulator |
| 2093 | VYSF01000012.1 | NEG54168.1 JB | 1365 [NA] | 454 [AA] | 12825-14189 | F6S92_11020 | carbohydrate ABC transporter substrate-binding protein |
| 2094 | VYSF01000013.1 | NEG54169.1 JB | 237 [NA] | 78 [AA] | 3967-4203 | F6S92_11035 | hypothetical protein |
| 2095 | VYSF01000013.1 | NEG54170.1 JB | 663 [NA] | 220 [AA] | 4504-5166 | F6S92_11040 | hypothetical protein |
| 2096 | VYSF01000013.1 | NEG54171.1 JB | 480 [NA] | 159 [AA] | 6342-6821 | F6S92_11045 | single-stranded DNA-binding protein |
| 2097 | VYSF01000013.1 | NEG54172.1 JB | 639 [NA] | 212 [AA] | 7178-7816 | F6S92_11050 | 3'-5' exonuclease |
| 2098 | VYSF01000013.1 | NEG54173.1 JB | 726 [NA] | 241 [AA] | 7830-8555 | F6S92_11055 | DUF2786 domain-containing protein |
| 2099 | VYSF01000013.1 | NEG54174.1 JB | 306 [NA] | 101 [AA] | 8616-8921 | F6S92_11060 | hypothetical protein |
| 2100 | VYSF01000013.1 | NEG54175.1 JB | 360 [NA] | 119 [AA] | 8954-9313 | F6S92_11065 | hypothetical protein |
| 2101 | VYSF01000013.1 | NEG54176.1 JB | 201 [NA] | 66 [AA] | 9389-9589 | F6S92_11070 | hypothetical protein |
| 2102 | VYSF01000013.1 | NEG54177.1 JB | 612 [NA] | 203 [AA] | 10051-10662 | F6S92_11075 | DUF4192 family protein |
| 2103 | VYSF01000013.1 | NEG54178.1 JB | 639 [NA] | 212 [AA] | 11776-12414 | F6S92_11090 | hypothetical protein |
| 2104 | VYSF01000013.1 | NEG54179.1 JB | 480 [NA] | 159 [AA] | 13421-13900 | F6S92_11095 | hypothetical protein |
| 2105 | VYSF01000014.1 | NEG54180.1 JB | 195 [NA] | 64 [AA] | 1537-1731 | F6S92_11105 | hypothetical protein |
| 2106 | VYSF01000015.1 | NEG54181.1 JB | 1386 [NA] | 461 [AA] | 1364-2749 | F6S92_11120 | tyrosine-type recombinase/integrase |
| 2107 | VYSF01000015.1 | NEG54182.1 JB | 198 [NA] | 65 [AA] | 2934-3131 | F6S92_11125 | helix-turn-helix domain-containing protein |
| 2108 | VYSF01000015.1 | NEG54183.1 JB | 399 [NA] | 132 [AA] | 3252-3650 | F6S92_11130 | AAA family ATPase |
| 2109 | VYSF01000016.1 | NEG54184.1 JB | 1479 [NA] | 492 [AA] | 179-1657 | F6S92_11135 | IS21 family transposase |
| 2110 | VYSF01000016.1 | NEG54185.1 JB | 780 [NA] | 259 [AA] | 1654-2433 | F6S92_11140 | AAA family ATPase |
| 2111 | VYSF01000017.1 | NEG54186.1 JB | 214 [NA] | 71 [AA] | <1-214 | F6S92_11145 | class C sortase |
| 2112 | VYSF01000017.1 | NEG54187.1 JB | 81 [NA] | 26 [AA] | 345->425 | F6S92_11150 | LPXTG cell wall anchor domain-containing protein |
| 2113 | VYSF01000019.1 | NEG54188.1 JB | 216 [NA] | 72 [AA] | <1->218 | F6S92_11160 | hypothetical protein |