Genome Explorer: Limosilactobacillus reuteri SD-LRE2-IT (SEQF7868.1)
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NCBI Annotation for SEQF7868.1
| Genome selected: Limosilactobacillus reuteri SD-LRE2-IT | |||
| Contigs: | 1 | Bases: | 2313802 bps |
| CDS: | 171 | rRNA: | 18 |
| tmRNA: | 1 | tRNA: | 71 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | CP080622.1 | UAW61408.1 JB | 156 [NA] | 51 [AA] | 1088361-1088516 | K3F51_05785 | hypothetical protein |
| 2002 | CP080622.1 | UAW61409.1 JB | 483 [NA] | 160 [AA] | 1088592-1089074 | K3F51_05790 | nucleoside 2-deoxyribosyltransferase |
| 2003 | CP080622.1 | UAW61410.1 JB | 837 [NA] | 278 [AA] | 1089119-1089955 | K3F51_05795 | Cof-type HAD-IIB family hydrolase |
| 2004 | CP080622.1 | UAW61411.1 JB | 363 [NA] | 120 [AA] | 1089976-1090338 | K3F51_05800 | LapA family protein |
| 2005 | CP080622.1 | UAW61412.1 JB | 459 [NA] | 152 [AA] | 1092817-1093275 | K3F51_05825 | IS200/IS605 family transposase |
| 2006 | CP080622.1 | UAW61413.1 JB | 861 [NA] | 286 [AA] | 1093503-1094363 | K3F51_05830 | alpha/beta hydrolase |
| 2007 | CP080622.1 | UAW61414.1 JB | 648 [NA] | 215 [AA] | 1094666-1095313 | K3F51_05835 | DsbA family oxidoreductase |
| 2008 | CP080622.1 | UAW61415.1 JB | 354 [NA] | 117 [AA] | 1095446-1095799 | K3F51_05840 | hypothetical protein |
| 2009 | CP080622.1 | UAW61416.1 JB | 765 [NA] | 254 [AA] | 1096985-1097749 | K3F51_05885 | enoyl-ACP reductase FabI |
| 2010 | CP080622.1 | UAW61417.1 JB | 849 [NA] | 282 [AA] | 1098530-1099378 | K3F51_05895 | acetyl-CoA carboxylase, carboxyltransferase subunit beta |
| 2011 | CP080622.1 | UAW61418.1 JB | 1371 [NA] | 456 [AA] | 1099375-1100745 | K3F51_05900 | acetyl-CoA carboxylase biotin carboxylase subunit |
| 2012 | CP080622.1 | UAW61419.1 JB | 435 [NA] | 144 [AA] | 1100754-1101188 | K3F51_05905 | 3-hydroxyacyl-ACP dehydratase FabZ |
| 2013 | CP080622.1 | UAW61420.1 JB | 453 [NA] | 150 [AA] | 1101181-1101633 | K3F51_05910 | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit |
| 2014 | CP080622.1 | UAW61421.1 JB | 1233 [NA] | 410 [AA] | 1101640-1102872 | K3F51_05915 | beta-ketoacyl-ACP synthase II |
| 2015 | CP080622.1 | UAW61422.1 JB | 735 [NA] | 244 [AA] | 1102883-1103617 | K3F51_05920 | 3-oxoacyl-[acyl-carrier-protein] reductase |
| 2016 | CP080622.1 | UAW61423.1 JB | 951 [NA] | 316 [AA] | 1103601-1104551 | K3F51_05925 | ACP S-malonyltransferase |
| 2017 | CP080622.1 | UAW61424.1 JB | 243 [NA] | 80 [AA] | 1104551-1104793 | K3F51_05930 | acyl carrier protein |
| 2018 | CP080622.1 | UAW61425.1 JB | 975 [NA] | 324 [AA] | 1104813-1105787 | K3F51_05935 | ketoacyl-ACP synthase III |
| 2019 | CP080622.1 | UAW61426.1 JB | 447 [NA] | 148 [AA] | 1105807-1106253 | K3F51_05940 | MarR family transcriptional regulator |
| 2020 | CP080622.1 | UAW61427.1 JB | 447 [NA] | 148 [AA] | 1106340-1106786 | K3F51_05945 | 3-hydroxyacyl-ACP dehydratase FabZ |
| 2021 | CP080622.1 | UAW61428.1 JB | 1080 [NA] | 359 [AA] | 1107111-1108190 | K3F51_05955 | tyrosine recombinase XerS |
| 2022 | CP080622.1 | UAW61429.1 JB | 159 [NA] | 52 [AA] | 1108263-1108421 | K3F51_05960 | hypothetical protein |
| 2023 | CP080622.1 | UAW61430.1 JB | 855 [NA] | 284 [AA] | 1110346-1111200 | K3F51_05970 | patatin family protein |
| 2024 | CP080622.1 | UAW61431.1 JB | 648 [NA] | 215 [AA] | 1111217-1111864 | K3F51_05975 | site-specific integrase |
| 2025 | CP080622.1 | UAW61432.1 JB | 891 [NA] | 296 [AA] | 1111973-1112863 | K3F51_05980 | DMT family transporter |
| 2026 | CP080622.1 | UAW61433.1 JB | 969 [NA] | 322 [AA] | 1112959-1113927 | K3F51_05985 | IS30 family transposase |
| 2027 | CP080622.1 | UAW61434.1 JB | 810 [NA] | 269 [AA] | 1117368-1118177 | K3F51_06010 | hydroxyethylthiazole kinase |
| 2028 | CP080622.1 | UAW61435.1 JB | 648 [NA] | 215 [AA] | 1118986-1119633 | K3F51_06020 | thiamine phosphate synthase |
| 2029 | CP080622.1 | UAW61436.1 JB | 1260 [NA] | 419 [AA] | 1119709-1120968 | K3F51_06025 | chloride channel protein |
| 2030 | CP080622.1 | UAW61437.1 JB | 2307 [NA] | 768 [AA] | 1121126-1123432 | K3F51_06030 | glycoside hydrolase family 31 protein |
| 2031 | CP080622.1 | UAW61438.1 JB | 642 [NA] | 213 [AA] | 1123577-1124218 | K3F51_06035 | phosphatase PAP2 family protein |
| 2032 | CP080622.1 | UAW61439.1 JB | 969 [NA] | 322 [AA] | 1124315-1125283 | K3F51_06040 | IS30 family transposase |
| 2033 | CP080622.1 | UAW61440.1 JB | 492 [NA] | 163 [AA] | 1130990-1131481 | K3F51_06060 | lipocalin/fatty acid-binding family protein |
| 2034 | CP080622.1 | UAW61441.1 JB | 282 [NA] | 93 [AA] | 1132585-1132866 | K3F51_06070 | hypothetical protein |
| 2035 | CP080622.1 | UAW61442.1 JB | 837 [NA] | 278 [AA] | 1132981-1133817 | K3F51_06075 | phosphoglycerate mutase family protein |
| 2036 | CP080622.1 | UAW61443.1 JB | 414 [NA] | 137 [AA] | 1135245-1135658 | K3F51_06090 | helix-turn-helix domain-containing protein |
| 2037 | CP080622.1 | UAW61444.1 JB | 2259 [NA] | 752 [AA] | 1135768-1138026 | K3F51_06095 | bifunctional metallophosphatase/5'-nucleotidase |
| 2038 | CP080622.1 | UAW61445.1 JB | 678 [NA] | 225 [AA] | 1138231-1138908 | K3F51_06100 | hypothetical protein |
| 2039 | CP080622.1 | UAW61446.1 JB | 1119 [NA] | 372 [AA] | 1142650-1143768 | K3F51_06110 | exonuclease SbcCD subunit D |
| 2040 | CP080622.1 | UAW61447.1 JB | 177 [NA] | 58 [AA] | 1143921-1144097 | K3F51_06115 | hypothetical protein |
| 2041 | CP080622.1 | UAW61448.1 JB | 777 [NA] | 258 [AA] | 1144116-1144892 | K3F51_06120 | tyrosine protein phosphatase |
| 2042 | CP080622.1 | UAW61449.1 JB | 3486 [NA] | 1161 [AA] | 1144989-1148474 | K3F51_06125 | DEAD/DEAH box helicase |
| 2043 | CP080622.1 | UAW61450.1 JB | 1893 [NA] | 630 [AA] | 1148539-1150431 | K3F51_06130 | hypothetical protein |
| 2044 | CP080622.1 | UAW61451.1 JB | 792 [NA] | 263 [AA] | 1150741-1151532 | K3F51_06135 | DUF3800 domain-containing protein |
| 2045 | CP080622.1 | UAW61452.1 JB | 801 [NA] | 266 [AA] | 1151553-1152353 | K3F51_06140 | helix-turn-helix transcriptional regulator |
| 2046 | CP080622.1 | UAW61453.1 JB | 258 [NA] | 85 [AA] | 1152547-1152804 | K3F51_06145 | hypothetical protein |
| 2047 | CP080622.1 | UAW61454.1 JB | 600 [NA] | 199 [AA] | 1153225-1153824 | K3F51_06155 | helix-turn-helix domain containing protein |
| 2048 | CP080622.1 | UAW61455.1 JB | 933 [NA] | 310 [AA] | 1155940-1156872 | K3F51_06170 | homocysteine S-methyltransferase |
| 2049 | CP080622.1 | UAW61456.1 JB | 546 [NA] | 181 [AA] | 32469-33014 | K3F51_00145 | cysteine hydrolase |
| 2050 | CP080622.1 | UAW61457.1 JB | 999 [NA] | 332 [AA] | 33461-34459 | K3F51_00150 | ADP-ribosylglycohydrolase family protein |
| 2051 | CP080622.1 | UAW61458.1 JB | 1395 [NA] | 464 [AA] | 147757-149151 | K3F51_00710 | tRNA lysidine(34) synthetase TilS |
| 2052 | CP080622.1 | UAW61459.1 JB | 2178 [NA] | 725 [AA] | 185816-187993 | K3F51_00885 | RNA-binding transcriptional accessory protein |
| 2053 | CP080622.1 | UAW61460.1 JB | 1122 [NA] | 373 [AA] | 213098-214219 | K3F51_01025 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) |
| 2054 | CP080622.1 | UAW61461.1 JB | 600 [NA] | 199 [AA] | 228491-229090 | K3F51_01110 | recombination mediator RecR |
| 2055 | CP080622.1 | UAW61462.1 JB | 1386 [NA] | 461 [AA] | 261732-263117 | K3F51_01270 | MFS transporter |
| 2056 | CP080622.1 | UAW61463.1 JB | 357 [NA] | 118 [AA] | 270665-271021 | K3F51_01310 | phage holin family protein |
| 2057 | CP080622.1 | UAW61464.1 JB | 1332 [NA] | 443 [AA] | 290469-291800 | K3F51_01395 | amino acid permease |
| 2058 | CP080622.1 | UAW61465.1 JB | 906 [NA] | 301 [AA] | 356211-357116 | K3F51_01730 | IS3 family transposase |
| 2059 | CP080622.1 | UAW61466.1 JB | 1542 [NA] | 513 [AA] | 450590-452131 | K3F51_02165 | ribonuclease Y |
| 2060 | CP080622.1 | UAW61467.1 JB | 435 [NA] | 144 [AA] | 618647-619081 | K3F51_03140 | DUF3850 domain-containing protein |
| 2061 | CP080622.1 | UAW61468.1 JB | 1284 [NA] | 427 [AA] | 634684-635967 | K3F51_03215 | LPXTG cell wall anchor domain-containing protein |
| 2062 | CP080622.1 | UAW61469.1 JB | 1836 [NA] | 611 [AA] | 651117-652952 | K3F51_03265 | ATP-dependent Clp protease ATP-binding subunit |
| 2063 | CP080622.1 | UAW61470.1 JB | 780 [NA] | 259 [AA] | 686404-687183 | K3F51_03440 | isoprenyl transferase |
| 2064 | CP080622.1 | UAW61471.1 JB | 1836 [NA] | 611 [AA] | 708869-710704 | K3F51_03535 | translation elongation factor 4 |
| 2065 | CP080622.1 | UAW61472.1 JB | 162 [NA] | 53 [AA] | 715381-715542 | K3F51_03585 | hypothetical protein |
| 2066 | CP080622.1 | UAW61473.1 JB | 306 [NA] | 101 [AA] | 720206-720511 | K3F51_03610 | hypothetical protein |
| 2067 | CP080622.1 | UAW61474.1 JB | 732 [NA] | 243 [AA] | 731003-731734 | K3F51_03660 | amino acid ABC transporter ATP-binding protein |
| 2068 | CP080622.1 | UAW61475.1 JB | 480 [NA] | 159 [AA] | 741662-742141 | K3F51_03715 | rRNA maturation RNase YbeY |
| 2069 | CP080622.1 | UAW61476.1 JB | 717 [NA] | 238 [AA] | 785902-786618 | K3F51_04065 | deoxynucleoside kinase |
| 2070 | CP080622.1 | UAW61477.1 JB | 906 [NA] | 301 [AA] | 792715-793620 | K3F51_04105 | IS3 family transposase |
| 2071 | CP080622.1 | UAW61478.1 JB | 1797 [NA] | 598 [AA] | 807540-809336 | K3F51_04240 | terminase large subunit |
| 2072 | CP080622.1 | UAW61479.1 JB | 795 [NA] | 264 [AA] | 810604-811398 | K3F51_04250 | Clp protease ClpP |
| 2073 | CP080622.1 | UAW61480.1 JB | 360 [NA] | 119 [AA] | 812482-812841 | K3F51_04260 | hypothetical protein |
| 2074 | CP080622.1 | UAW61481.1 JB | 2100 [NA] | 699 [AA] | 857438-859537 | K3F51_04495 | type I DNA topoisomerase |
| 2075 | CP080622.1 | UAW61482.1 JB | 789 [NA] | 262 [AA] | 880731-881519 | K3F51_04610 | acetoin reductase |
| 2076 | CP080622.1 | UAW61483.1 JB | 615 [NA] | 204 [AA] | 888716-889330 | K3F51_04635 | restriction endonuclease subunit S |
| 2077 | CP080622.1 | UAW61484.1 JB | 1068 [NA] | 355 [AA] | 897667-898734 | K3F51_04670 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD |
| 2078 | CP080622.1 | UAW61485.1 JB | 912 [NA] | 303 [AA] | 907202-908113 | K3F51_04710 | IS3 family transposase |
| 2079 | CP080622.1 | UAW61486.1 JB | 654 [NA] | 217 [AA] | 921587-922240 | K3F51_04790 | response regulator transcription factor |
| 2080 | CP080622.1 | UAW61487.1 JB | 813 [NA] | 270 [AA] | 924312-925124 | K3F51_04805 | Cof-type HAD-IIB family hydrolase |
| 2081 | CP080622.1 | UAW61488.1 JB | 318 [NA] | 105 [AA] | 983757-984074 | K3F51_05220 | phage head-tail connector protein |
| 2082 | CP080622.1 | UAW61489.1 JB | 180 [NA] | 59 [AA] | 998546-998725 | K3F51_05270 | hypothetical protein |
| 2083 | CP080622.1 | UAW61490.1 JB | 387 [NA] | 128 [AA] | 1019869-1020255 | K3F51_05375 | hypothetical protein |
| 2084 | CP080622.1 | UAW61491.1 JB | 309 [NA] | 102 [AA] | 1022201-1022509 | K3F51_05395 | helix-turn-helix domain-containing protein |
| 2085 | CP080622.1 | UAW61492.1 JB | 633 [NA] | 210 [AA] | 1028280-1028912 | K3F51_05475 | DUF5052 family protein |
| 2086 | CP080622.1 | UAW61493.1 JB | 216 [NA] | 71 [AA] | 1032377-1032592 | K3F51_05505 | hypothetical protein |
| 2087 | CP080622.1 | UAW61494.1 JB | 1752 [NA] | 583 [AA] | 1045399-1047150 | K3F51_05575 | phage tail protein |
| 2088 | CP080622.1 | UAW61495.1 JB | 1095 [NA] | 364 [AA] | 1053633-1054727 | K3F51_05610 | phage baseplate upper protein |
| 2089 | CP080622.1 | UAW61496.1 JB | 891 [NA] | 296 [AA] | 1059051-1059941 | K3F51_05650 | aldo/keto reductase |
| 2090 | CP080622.1 | UAW61497.1 JB | 351 [NA] | 116 [AA] | 1090725-1091075 | K3F51_05810 | tyrosine-type recombinase/integrase |
| 2091 | CP080622.1 | UAW61498.1 JB | 255 [NA] | 84 [AA] | 1092025-1092279 | K3F51_05815 | type II toxin-antitoxin system RelE/ParE family toxin |
| 2092 | CP080622.1 | UAW61499.1 JB | 561 [NA] | 186 [AA] | 1134683-1135243 | K3F51_06085 | Fic family protein |
| 2093 | CP080622.1 | UAW61500.1 JB | 906 [NA] | 301 [AA] | 1153761-1154666 | K3F51_06160 | IS3 family transposase |
| 2094 | CP080622.1 | UAW61501.1 JB | 1659 [NA] | 552 [AA] | 1173044-1174702 | K3F51_06235 | DUF2971 domain-containing protein |
| 2095 | CP080622.1 | UAW61502.1 JB | 399 [NA] | 132 [AA] | 1180641-1181039 | K3F51_06275 | IS200/IS605 family transposase |
| 2096 | CP080622.1 | UAW61503.1 JB | 1020 [NA] | 339 [AA] | 1207447-1208466 | K3F51_06410 | LacI family DNA-binding transcriptional regulator |
| 2097 | CP080622.1 | UAW61504.1 JB | 333 [NA] | 110 [AA] | 1211906-1212238 | K3F51_06430 | MazG-like family protein |
| 2098 | CP080622.1 | UAW61505.1 JB | 138 [NA] | 45 [AA] | 1262292-1262429 | K3F51_06695 | XkdX family protein |
| 2099 | CP080622.1 | UAW61506.1 JB | 825 [NA] | 274 [AA] | 1294521-1295345 | K3F51_06920 | PD-(D/E)XK nuclease-like domain-containing protein |
| 2100 | CP080622.1 | UAW61507.1 JB | 192 [NA] | 63 [AA] | 1296658-1296849 | K3F51_06940 | helix-turn-helix domain-containing protein |
| 2101 | CP080622.1 | UAW61508.1 JB | 315 [NA] | 104 [AA] | 1308877-1309191 | K3F51_07055 | metal-sulfur cluster assembly factor |
| 2102 | CP080622.1 | UAW61509.1 JB | 981 [NA] | 326 [AA] | 1363460-1364440 | K3F51_07355 | aldo/keto reductase |
| 2103 | CP080622.1 | UAW61510.1 JB | 360 [NA] | 119 [AA] | 1391699-1392058 | K3F51_07485 | dihydroneopterin aldolase |
| 2104 | CP080622.1 | UAW61511.1 JB | 546 [NA] | 181 [AA] | 1550224-1550769 | K3F51_08315 | cysteine hydrolase |
| 2105 | CP080622.1 | UAW61512.1 JB | 1032 [NA] | 343 [AA] | 1558534-1559565 | K3F51_08370 | recombinase family protein |
| 2106 | CP080622.1 | UAW61513.1 JB | 567 [NA] | 188 [AA] | 1560307-1560873 | K3F51_08385 | uracil-DNA glycosylase family protein |
| 2107 | CP080622.1 | UAW61514.1 JB | 972 [NA] | 323 [AA] | 1569342-1570313 | K3F51_08440 | plasmid pRiA4b ORF-3 family protein |
| 2108 | CP080622.1 | UAW61515.1 JB | 867 [NA] | 288 [AA] | 1631179-1632045 | K3F51_08775 | alpha/beta hydrolase |
| 2109 | CP080622.1 | UAW61516.1 JB | 735 [NA] | 244 [AA] | 1642455-1643189 | K3F51_08865 | amino acid ABC transporter ATP-binding protein |
| 2110 | CP080622.1 | UAW61517.1 JB | 912 [NA] | 303 [AA] | 1653060-1653971 | K3F51_08920 | IS3 family transposase |
| 2111 | CP080622.1 | UAW61518.1 JB | 201 [NA] | 66 [AA] | 1676706-1676906 | K3F51_09015 | hypothetical protein |
| 2112 | CP080622.1 | UAW61519.1 JB | 945 [NA] | 314 [AA] | 1688982-1689926 | K3F51_09065 | Dyp-type peroxidase |
| 2113 | CP080622.1 | UAW61520.1 JB | 537 [NA] | 178 [AA] | 1742844-1743380 | K3F51_09340 | TIGR01440 family protein |
| 2114 | CP080622.1 | UAW61521.1 JB | 399 [NA] | 132 [AA] | 1768129-1768527 | K3F51_09450 | IS200/IS605 family transposase |
| 2115 | CP080622.1 | UAW61522.1 JB | 399 [NA] | 132 [AA] | 1806261-1806659 | K3F51_09625 | IS200/IS605 family transposase |
| 2116 | CP080622.1 | UAW61523.1 JB | 1029 [NA] | 342 [AA] | 1842287-1843315 | K3F51_09795 | D-2-hydroxyacid dehydrogenase |
| 2117 | CP080622.1 | UAW61524.1 JB | 615 [NA] | 204 [AA] | 1875313-1875927 | K3F51_09985 | histidine phosphatase family protein |
| 2118 | CP080622.1 | UAW61525.1 JB | 516 [NA] | 171 [AA] | 1886726-1887241 | K3F51_10060 | diol dehydratase small subunit |
| 2119 | CP080622.1 | UAW61526.1 JB | 525 [NA] | 174 [AA] | 1898754-1899278 | K3F51_10130 | SDR family oxidoreductase |
| 2120 | CP080622.1 | UAW61527.1 JB | 1344 [NA] | 447 [AA] | 1900317-1901660 | K3F51_10140 | hemolysin family protein |
| 2121 | CP080622.1 | UAW61528.1 JB | 1158 [NA] | 385 [AA] | 1937132-1938289 | K3F51_10255 | galactokinase |
| 2122 | CP080622.1 | UAW61529.1 JB | 720 [NA] | 239 [AA] | 1945459-1946178 | K3F51_10305 | response regulator transcription factor |
| 2123 | CP080622.1 | UAW61530.1 JB | 315 [NA] | 104 [AA] | 2021601-2021915 | K3F51_10655 | metalloregulator ArsR/SmtB family transcription factor |
| 2124 | CP080622.1 | UAW61531.1 JB | 1110 [NA] | 369 [AA] | 2060210-2061319 | K3F51_10835 | GGDEF domain-containing protein |
| 2125 | CP080622.1 | UAW61532.1 JB | 906 [NA] | 301 [AA] | 2068104-2069009 | K3F51_10880 | IS3 family transposase |
| 2126 | CP080622.1 | UAW61533.1 JB | 438 [NA] | 145 [AA] | 2081433-2081870 | K3F51_10950 | alpha/beta hydrolase |
| 2127 | CP080622.1 | UAW61534.1 JB | 1920 [NA] | 639 [AA] | 2126673-2128592 | K3F51_11195 | DNA topoisomerase (ATP-hydrolyzing) subunit B |
| 2128 | CP080622.1 | UAW61535.1 JB | 906 [NA] | 301 [AA] | 2217590-2218495 | K3F51_11585 | IS3 family transposase |
| 2129 | CP080622.1 | UAW61536.1 JB | 1206 [NA] | 401 [AA] | 2263071-2264276 | K3F51_11740 | NupC/NupG family nucleoside CNT transporter |
| 2130 | CP080622.1 | UAW61537.1 JB | 1176 [NA] | 391 [AA] | 2290031-2291206 | K3F51_11880 | cyclopropane-fatty-acyl-phospholipid synthase family protein |
| 2131 | CP080622.1 | UAW61538.1 JB | 249 [NA] | 82 [AA] | 781856-782104 | K3F51_04005 | hypothetical protein |
| 2132 | CP080622.1 | UAW61539.1 JB | 483 [NA] | 160 [AA] | 1021233-1021715 | K3F51_05385 | hypothetical protein |