HOMD Banner
16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Gardnerella vaginalis UMB1350 (SEQF7993.1)
Choose a Genome:
PROKKA Annotation for SEQF7993.1
Genome selected: Gardnerella vaginalis UMB1350
Contigs:12 Bases:1502805 bps
CDS:1130 rRNA:3
tmRNA:1 tRNA:45
Annotation Table [page:3]
Number of Records Found: 1130 [3 Pages]
Previous Page <==> Next Page
Or Select Page:
[ 1  2  3  ]
SEARCH & SORT all records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse

Note: Column headers only sort the current page.
# Molecule PID NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
1001 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01056 JB 1887 [NA] 628 [AA] 65781-67667 asnB Asparagine synthetase [glutamine-hydrolyzing] 1
1002 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01057 JB 735 [NA] 244 [AA] 67924-68658 infC Translation initiation factor IF-3
1003 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01058 JB 195 [NA] 64 [AA] 68639-68833 rpmI 50S ribosomal protein L35
1004 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01059 JB 384 [NA] 127 [AA] 68902-69285 rplT 50S ribosomal protein L20
1005 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01060 JB 960 [NA] 319 [AA] 69380-70339 xerD Tyrosine recombinase XerD
1006 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01061 JB 840 [NA] 279 [AA] 70388-71227 putative protein
1007 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01062 JB 1926 [NA] 641 [AA] 71419-73344 typA GTP-binding protein TypABipA
1008 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01063 JB 408 [NA] 135 [AA] 73387-73794 hypothetical protein
1009 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01064 JB 999 [NA] 332 [AA] 73931-74929 pheA Bifunctional chorismate mutaseprephenate dehydratase
1010 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01065 JB 1104 [NA] 367 [AA] 74923-76026 tyrA Prephenate dehydrogenase
1011 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01066 JB 294 [NA] 97 [AA] 76050-76343 hypothetical protein
1012 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01067 JB 969 [NA] 322 [AA] 76429-77397 xerC Tyrosine recombinase XerC
1013 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01068 JB 1629 [NA] 542 [AA] 77783-79411 dppE Dipeptide-binding protein DppE
1014 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01069 JB 927 [NA] 308 [AA] 79613-80539 dppB Dipeptide transport system permease protein DppB
1015 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01070 JB 993 [NA] 330 [AA] 80552-81544 oppC_2 Oligopeptide transport system permease protein OppC
1016 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01071 JB 2025 [NA] 674 [AA] 81569-83593 btuD_11 Vitamin B12 import ATP-binding protein BtuD
1017 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01072 JB 867 [NA] 288 [AA] 83773-84639 exoA Exodeoxyribonuclease
1018 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01073 JB 765 [NA] 254 [AA] 84819-85583 hypothetical protein
1019 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01074 JB 807 [NA] 268 [AA] 85608-86414 hypothetical protein
1020 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01075 JB 1401 [NA] 466 [AA] 86452-87852 putative RNA methyltransferase
1021 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01076 JB 1173 [NA] 390 [AA] 88241-89413 putative protein
1022 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01077 JB 645 [NA] 214 [AA] 89744-90388 hypothetical protein
1023 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01078 JB 765 [NA] 254 [AA] 90759-91523 hypothetical protein
1024 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01079 JB 726 [NA] 241 [AA] 91537-92262 hypothetical protein
1025 SEQF7993.1_JABUHB010000004.1 SEQF7993.1_01080 JB 765 [NA] 254 [AA] 92259-93023 bcrA_2 Bacitracin transport ATP-binding protein BcrA
1026 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01081 JB 816 [NA] 271 [AA] 236-1051 hypothetical protein
1027 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01082 JB 2634 [NA] 877 [AA] 1075-3708 kup Low affinity potassium transport system protein kup
1028 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01083 JB 981 [NA] 326 [AA] 3873-4853 dtd3 D-aminoacyl-tRNA deacylase
1029 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01084 JB 1797 [NA] 598 [AA] 4908-6704 putative ABC transporter ATP-binding protein
1030 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01085 JB 1815 [NA] 604 [AA] 6707-8521 Putative multidrug export ATP-bindingpermease protein
1031 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01086 JB 1743 [NA] 580 [AA] 8701-10443 putative protein
1032 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01087 JB 1890 [NA] 629 [AA] 10767-12656 putative ABC transporter ATP-binding protein
1033 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01088 JB 948 [NA] 315 [AA] 12678-13625 Putative peptide transport permease protein
1034 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01089 JB 984 [NA] 327 [AA] 13650-14633 Putative peptide transport permease protein
1035 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01090 JB 1545 [NA] 514 [AA] 15094-16638 pepC_2 Aminopeptidase C
1036 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01091 JB 1872 [NA] 623 [AA] 16984-18855 metG Methionine--tRNA ligase
1037 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01092 JB 627 [NA] 208 [AA] 19160-19786 hypothetical protein
1038 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01093 JB 264 [NA] 87 [AA] 19777-20040 hypothetical protein
1039 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01094 JB 903 [NA] 300 [AA] 20076-20978 rsmI Ribosomal RNA small subunit methyltransferase I
1040 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01095 JB 843 [NA] 280 [AA] 21108-21950 hypothetical protein
1041 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01096 JB 1518 [NA] 505 [AA] 22166-23683 fhs Formate--tetrahydrofolate ligase
1042 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01097 JB 1608 [NA] 535 [AA] 23912-25519 pepD Dipeptidase
1043 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01098 JB 552 [NA] 183 [AA] 25631-26182 hypothetical protein
1044 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01099 JB 1533 [NA] 510 [AA] 26406-27938 ulaA_2 Ascorbate-specific PTS system EIIC component
1045 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01100 JB 270 [NA] 89 [AA] 28055-28324 ulaB Ascorbate-specific PTS system EIIB component
1046 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01101 JB 450 [NA] 149 [AA] 28388-28837 hypothetical protein
1047 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01102 JB 1659 [NA] 552 [AA] 28942-30600 ptsI Phosphoenolpyruvate-protein phosphotransferase
1048 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01103 JB 267 [NA] 88 [AA] 30876-31142 ptsH Phosphocarrier protein HPr
1049 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01104 JB 1080 [NA] 359 [AA] 31242-32321 galR HTH-type transcriptional regulator GalR
1050 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01105 JB 1179 [NA] 392 [AA] 32334-33512 hypothetical protein
1051 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01106 JB 705 [NA] 234 [AA] 33567-34271 tmk Thymidylate kinase
1052 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01107 JB 2856 [NA] 951 [AA] 34320-37175 topA DNA topoisomerase 1
1053 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01108 JB 1308 [NA] 435 [AA] 37307-38614 hypothetical protein
1054 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01110 JB 1143 [NA] 380 [AA] 38798-39940 ino1 Inositol-3-phosphate synthase
1055 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01111 JB 2325 [NA] 774 [AA] 40113-42437 ponA1_2 Penicillin-binding protein 1A
1056 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01112 JB 744 [NA] 247 [AA] 42566-43309 gph Phosphoglycolate phosphatase
1057 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01113 JB 597 [NA] 198 [AA] 43485-44081 hypothetical protein
1058 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01114 JB 1053 [NA] 350 [AA] 44169-45221 cbpA Curved DNA-binding protein
1059 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01115 JB 696 [NA] 231 [AA] 45348-46043 grpE Protein GrpE
1060 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01116 JB 1884 [NA] 627 [AA] 46043-47926 dnaK Chaperone protein DnaK
1061 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01117 JB 732 [NA] 243 [AA] 48194-48925 moeZ putative adenylyltransferasesulfurtransferase MoeZ
1062 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01118 JB 813 [NA] 270 [AA] 48962-49774 thiG_2 Thiazole synthase
1063 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01119 JB 207 [NA] 68 [AA] 49864-50070 hypothetical protein
1064 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01120 JB 1071 [NA] 356 [AA] 50193-51263 thiO Glycine oxidase
1065 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01122 JB 2841 [NA] 946 [AA] 52031-54871 hypothetical protein
1066 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01123 JB 912 [NA] 303 [AA] 54905-55816 araQ_2 L-arabinose transport system permease protein AraQ
1067 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01124 JB 936 [NA] 311 [AA] 55813-56748 ngcF Diacetylchitobiose uptake system permease protein NgcF
1068 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01125 JB 1386 [NA] 461 [AA] 56796-58181 hypothetical protein
1069 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01126 JB 1026 [NA] 341 [AA] 58455-59480 cytR_2 HTH-type transcriptional repressor CytR
1070 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01127 JB 837 [NA] 278 [AA] 59629-60465 hypothetical protein
1071 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01128 JB 1701 [NA] 566 [AA] 60543-62243 treS Trehalose synthaseamylase TreS
1072 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01129 JB 1230 [NA] 409 [AA] 62502-63731 cycB Cyclodextrin-binding protein
1073 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01130 JB 1407 [NA] 468 [AA] 63891-65297 hypothetical protein
1074 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01131 JB 924 [NA] 307 [AA] 65294-66217 dasC Diacetylchitobiose uptake system permease protein DasC
1075 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01132 JB 2010 [NA] 669 [AA] 66528-68537 pulA Pullulanase
1076 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01133 JB 2250 [NA] 749 [AA] 68816-71065 malQ_2 4-alpha-glucanotransferase
1077 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01134 JB 612 [NA] 203 [AA] 71249-71860 hypothetical protein
1078 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01135 JB 834 [NA] 277 [AA] 72049-72882 ngcG Diacetylchitobiose uptake system permease protein NgcG
1079 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01136 JB 843 [NA] 280 [AA] 72879-73721 melD Melibioseraffinosestachyose import permease protein MelD
1080 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01137 JB 1014 [NA] 337 [AA] 74033-75046 cytR_3 HTH-type transcriptional repressor CytR
1081 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01138 JB 1344 [NA] 447 [AA] 75209-76552 hypothetical protein
1082 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01140 JB 711 [NA] 236 [AA] 76913-77623 gpm2 Acid phosphatase
1083 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01141 JB 459 [NA] 152 [AA] 77793-78251 hypothetical protein
1084 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01142 JB 783 [NA] 260 [AA] 78320-79102 nfrA1 FMN reductase (NADPH)
1085 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01143 JB 1572 [NA] 523 [AA] 79688-81259 dapL LL-diaminopimelate aminotransferase
1086 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01144 JB 1263 [NA] 420 [AA] 81395-82657 hypothetical protein
1087 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01145 JB 525 [NA] 174 [AA] 82702-83226 hypothetical protein
1088 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01146 JB 1212 [NA] 403 [AA] 83254-84465 macB_2 Macrolide export ATP-bindingpermease protein MacB
1089 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01147 JB 705 [NA] 234 [AA] 84449-85153 yknY putative ABC transporter ATP-binding protein YknY
1090 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01148 JB 903 [NA] 300 [AA] 85156-86058 hypothetical protein
1091 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01149 JB 672 [NA] 223 [AA] 86534-87205 liaR Transcriptional regulatory protein LiaR
1092 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01150 JB 1161 [NA] 386 [AA] 87202-88362 hypothetical protein
1093 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01151 JB 372 [NA] 123 [AA] 88524-88895 hypothetical protein
1094 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01152 JB 282 [NA] 93 [AA] 89076-89357 hypothetical protein
1095 SEQF7993.1_JABUHB010000005.1 SEQF7993.1_01153 JB 720 [NA] 239 [AA] 89448-90167 cnbA Chloronitrobenzene nitroreductase
1096 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01154 JB 1251 [NA] 416 [AA] 279-1529 hypothetical protein
1097 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01155 JB 540 [NA] 179 [AA] 1663-2202 hypothetical protein
1098 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01156 JB 555 [NA] 184 [AA] 2550-3104 pncA Nicotinamidasepyrazinamidase
1099 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01157 JB 2295 [NA] 764 [AA] 3357-5651 hypothetical protein
1100 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01158 JB 1206 [NA] 401 [AA] 5683-6888 hypothetical protein
1101 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01159 JB 2229 [NA] 742 [AA] 6869-9097 hypothetical protein
1102 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01160 JB 1779 [NA] 592 [AA] 9116-10894 hypothetical protein
1103 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01161 JB 822 [NA] 273 [AA] 10882-11703 btuD_12 Vitamin B12 import ATP-binding protein BtuD
1104 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01162 JB 864 [NA] 287 [AA] 11703-12566 mntB_2 Manganese transport system membrane protein MntB
1105 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01163 JB 885 [NA] 294 [AA] 12587-13471 hypothetical protein
1106 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01164 JB 996 [NA] 331 [AA] 13613-14608 gpsA Glycerol-3-phosphate dehydrogenase [NAD(P)+]
1107 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01165 JB 1143 [NA] 380 [AA] 14681-15823 ddl D-alanine--D-alanine ligase
1108 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01166 JB 993 [NA] 330 [AA] 15925-16917 hypothetical protein
1109 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01167 JB 1374 [NA] 457 [AA] 16979-18352 hom Homoserine dehydrogenase
1110 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01168 JB 1077 [NA] 358 [AA] 18371-19447 thrB Homoserine kinase
1111 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01169 JB 1440 [NA] 479 [AA] 19481-20920 dTTPUTP pyrophosphatase
1112 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01170 JB 396 [NA] 131 [AA] 20731-21126 hypothetical protein
1113 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01171 JB 942 [NA] 313 [AA] 21142-22083 hypothetical protein
1114 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01172 JB 3306 [NA] 1101 [AA] 22478-25783 rne Ribonuclease E
1115 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01173 JB 309 [NA] 102 [AA] 25958-26266 rplU 50S ribosomal protein L21
1116 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01174 JB 252 [NA] 83 [AA] 26300-26551 rpmA 50S ribosomal protein L27
1117 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01175 JB 1683 [NA] 560 [AA] 26699-28381 obg GTPase Obg
1118 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01176 JB 1146 [NA] 381 [AA] 28407-29552 proB Glutamate 5-kinase
1119 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01177 JB 1239 [NA] 412 [AA] 29655-30893 aspC1 Aspartate aminotransferase
1120 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01179 JB 228 [NA] 75 [AA] 31163-31390 secE Protein translocase subunit SecE
1121 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01180 JB 888 [NA] 295 [AA] 31432-32319 nusG Transcription terminationantitermination protein NusG
1122 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01181 JB 2343 [NA] 780 [AA] 32647-34989 hypothetical protein
1123 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01182 JB 1932 [NA] 643 [AA] 35232-37163 hypothetical protein
1124 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01183 JB 999 [NA] 332 [AA] 37914-38912 hypothetical protein
1125 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01184 JB 141 [NA] 46 [AA] 38842-38982 hypothetical protein
1126 SEQF7993.1_JABUHB010000006.1 SEQF7993.1_01185 JB 1368 [NA] 455 [AA] 39099-40466 hypothetical protein
1127 SEQF7993.1_JABUHB010000008.1 SEQF7993.1_01189 JB 516 [NA] 171 [AA] 1136-1651 regX3 Sensory transduction protein regX3
1128 SEQF7993.1_JABUHB010000009.1 SEQF7993.1_01190 JB 975 [NA] 324 [AA] 38-1012 hypothetical protein
1129 SEQF7993.1_JABUHB010000010.1 SEQF7993.1_01191 JB 360 [NA] 119 [AA] 259-618 bcrA_3 Bacitracin transport ATP-binding protein BcrA
1130 SEQF7993.1_JABUHB010000011.1 SEQF7993.1_01192 JB 372 [NA] 123 [AA] 6-377 hypothetical protein