Genome Explorer: Bifidobacterium longum NBRC 114494 (SEQF8356.1)
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NCBI Annotation for SEQF8356.1
| Genome selected: Bifidobacterium longum NBRC 114494 | |||
| Contigs: | 3 | Bases: | 2534372 bps |
| CDS: | 50 | rRNA: | 12 |
| tmRNA: | 1 | tRNA: | 58 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | CP084020.1 | UCH56497.1 JB | 1023 [NA] | 340 [AA] | 847312-848334 | LCQ52_03715 | NAD kinase |
| 2002 | CP084020.1 | UCH56498.1 JB | 300 [NA] | 99 [AA] | 888402-888701 | LCQ52_03885 | WhiB family transcriptional regulator |
| 2003 | CP084020.1 | UCH56499.1 JB | 846 [NA] | 281 [AA] | 912957-913802 | LCQ52_03990 | IS3 family transposase |
| 2004 | CP084020.1 | UCH56500.1 JB | 2121 [NA] | 706 [AA] | 921008-923128 | LCQ52_04030 | glycogen debranching protein GlgX |
| 2005 | CP084020.1 | UCH56501.1 JB | 117 [NA] | 38 [AA] | 931476-931592 | LCQ52_04075 | beta-galactosidase |
| 2006 | CP084020.1 | UCH56502.1 JB | 984 [NA] | 327 [AA] | 949832-950815 | LCQ52_04180 | MFS transporter |
| 2007 | CP084020.1 | UCH56503.1 JB | 270 [NA] | 89 [AA] | 950935-951204 | LCQ52_04185 | transposase domain-containing protein |
| 2008 | CP084020.1 | UCH56504.1 JB | 2460 [NA] | 819 [AA] | 996954-999413 | LCQ52_04375 | histidine kinase |
| 2009 | CP084020.1 | UCH56505.1 JB | 1965 [NA] | 654 [AA] | 1055198-1057162 | LCQ52_04625 | acetyltransferase |
| 2010 | CP084020.1 | UCH56506.1 JB | 1455 [NA] | 484 [AA] | 1072223-1073677 | LCQ52_04700 | Fe-S cluster assembly protein SufB |
| 2011 | CP084020.1 | UCH56507.1 JB | 633 [NA] | 210 [AA] | 1137948-1138580 | LCQ52_05000 | dienelactone hydrolase family protein |
| 2012 | CP084020.1 | UCH56508.1 JB | 963 [NA] | 320 [AA] | 1149404-1150366 | LCQ52_05040 | aspartate carbamoyltransferase |
| 2013 | CP084020.1 | UCH56509.1 JB | 339 [NA] | 112 [AA] | 1168177-1168515 | LCQ52_05135 | MFS transporter |
| 2014 | CP084020.1 | UCH56510.1 JB | 249 [NA] | 82 [AA] | 1169619-1169867 | LCQ52_05150 | hypothetical protein |
| 2015 | CP084020.1 | UCH56511.1 JB | 324 [NA] | 107 [AA] | 1170652-1170975 | LCQ52_05160 | carbon-nitrogen hydrolase family protein |
| 2016 | CP084020.1 | UCH56512.1 JB | 1161 [NA] | 386 [AA] | 1174924-1176084 | LCQ52_05200 | ABC transporter permease |
| 2017 | CP084020.1 | UCH56513.1 JB | 516 [NA] | 171 [AA] | 1187451-1187966 | LCQ52_05275 | GNAT family N-acetyltransferase |
| 2018 | CP084020.1 | UCH56514.1 JB | 408 [NA] | 135 [AA] | 1205161-1205568 | LCQ52_05375 | hypothetical protein |
| 2019 | CP084020.1 | UCH56515.1 JB | 420 [NA] | 139 [AA] | 1224409-1224828 | LCQ52_05465 | preprotein translocase subunit YajC |
| 2020 | CP084020.1 | UCH56516.1 JB | 747 [NA] | 248 [AA] | 1268240-1268986 | LCQ52_05805 | site-specific integrase |
| 2021 | CP084020.1 | UCH56517.1 JB | 975 [NA] | 324 [AA] | 1420614-1421588 | LCQ52_06530 | Fic family protein |
| 2022 | CP084020.1 | UCH56518.1 JB | 438 [NA] | 145 [AA] | 1428004-1428441 | LCQ52_06565 | gas vesicle protein |
| 2023 | CP084020.1 | UCH56519.1 JB | 312 [NA] | 103 [AA] | 1453606-1453917 | LCQ52_06675 | macrolide ABC transporter ATP-binding protein |
| 2024 | CP084020.1 | UCH56520.1 JB | 855 [NA] | 284 [AA] | 1460247-1461101 | LCQ52_06730 | IS3 family transposase |
| 2025 | CP084020.1 | UCH56521.1 JB | 663 [NA] | 220 [AA] | 1482272-1482934 | LCQ52_06795 | DUF4192 family protein |
| 2026 | CP084020.1 | UCH56522.1 JB | 750 [NA] | 249 [AA] | 1502924-1503673 | LCQ52_06885 | Fic family protein |
| 2027 | CP084020.1 | UCH56523.1 JB | 741 [NA] | 246 [AA] | 1506290-1507030 | LCQ52_06900 | GTP pyrophosphokinase family protein |
| 2028 | CP084020.1 | UCH56524.1 JB | 1017 [NA] | 338 [AA] | 1507063-1508079 | LCQ52_06905 | DMT family transporter |
| 2029 | CP084020.1 | UCH56525.1 JB | 726 [NA] | 241 [AA] | 1511747-1512472 | LCQ52_06925 | response regulator transcription factor |
| 2030 | CP084020.1 | UCH56526.1 JB | 1269 [NA] | 422 [AA] | 1522538-1523806 | LCQ52_06965 | RsmD family RNA methyltransferase |
| 2031 | CP084020.1 | UCH56527.1 JB | 1155 [NA] | 384 [AA] | 1535663-1536817 | LCQ52_07020 | prephenate dehydrogenase/arogenate dehydrogenase family protein |
| 2032 | CP084020.1 | UCH56528.1 JB | 723 [NA] | 240 [AA] | 1555468-1556190 | LCQ52_07105 | translation initiation factor IF-3 |
| 2033 | CP084020.1 | UCH56529.1 JB | 789 [NA] | 262 [AA] | 1564272-1565060 | LCQ52_07150 | sigma-70 family RNA polymerase sigma factor |
| 2034 | CP084020.1 | UCH56530.1 JB | 852 [NA] | 283 [AA] | 1574564-1575415 | LCQ52_07175 | hypothetical protein |
| 2035 | CP084020.1 | UCH56531.1 JB | 183 [NA] | 60 [AA] | 1621001-1621183 | LCQ52_07350 | phage holin |
| 2036 | CP084020.1 | UCH56532.1 JB | 600 [NA] | 199 [AA] | 1657124-1657723 | LCQ52_07505 | imidazoleglycerol-phosphate dehydratase HisB |
| 2037 | CP084020.1 | UCH56533.1 JB | 1476 [NA] | 491 [AA] | 1660771-1662246 | LCQ52_07525 | gluconate kinase |
| 2038 | CP084020.1 | UCH56534.1 JB | 411 [NA] | 136 [AA] | 1673380-1673790 | LCQ52_07565 | DUF4186 domain-containing protein |
| 2039 | CP084020.1 | UCH56535.1 JB | 3558 [NA] | 1185 [AA] | 1673903-1677460 | LCQ52_07570 | DNA polymerase III subunit alpha |
| 2040 | CP084020.1 | UCH56536.1 JB | 882 [NA] | 293 [AA] | 1714357-1715238 | LCQ52_07745 | Lon protease |
| 2041 | CP084020.1 | UCH56537.1 JB | 738 [NA] | 245 [AA] | 1722114-1722851 | LCQ52_07775 | vitamin K epoxide reductase family protein |
| 2042 | CP084020.1 | UCH56538.1 JB | 768 [NA] | 255 [AA] | 1744977-1745744 | LCQ52_07895 | ABC transporter ATP-binding protein |
| 2043 | CP084020.1 | UCH56539.1 JB | 693 [NA] | 230 [AA] | 1779372-1780064 | LCQ52_08035 | NINE protein |
| 2044 | CP084020.1 | UCH56540.1 JB | 1794 [NA] | 597 [AA] | 1811559-1813352 | LCQ52_08165 | 5'-nucleotidase C-terminal domain-containing protein |
| 2045 | CP084020.1 | UCH56541.1 JB | 699 [NA] | 232 [AA] | 1852065-1852763 | LCQ52_08340 | DedA family protein |
| 2046 | CP084020.1 | UCH56542.1 JB | 966 [NA] | 321 [AA] | 1880921-1881886 | LCQ52_08445 | ribokinase |
| 2047 | CP084020.1 | UCH56543.1 JB | 915 [NA] | 304 [AA] | 2013885-2014799 | LCQ52_08975 | ABC transporter ATP-binding protein |
| 2048 | CP084020.1 | UCH56544.1 JB | 801 [NA] | 266 [AA] | 2027954-2028754 | LCQ52_09050 | thymidylate synthase |
| 2049 | CP084020.1 | UCH56545.1 JB | 150 [NA] | 49 [AA] | 2146884-2147033 | LCQ52_09610 | 50S ribosomal protein L33 |
| 2050 | CP084020.1 | UCH56546.1 JB | 570 [NA] | 189 [AA] | 2152937-2153506 | LCQ52_09665 | SAF domain-containing protein |
| 2051 | CP084020.1 | UCH56547.1 JB | 1143 [NA] | 380 [AA] | 2185009-2186151 | LCQ52_09770 | histidine kinase |
| 2052 | CP084020.1 | UCH56548.1 JB | 906 [NA] | 301 [AA] | 2206280-2207185 | LCQ52_09835 | biotin--[acetyl-CoA-carboxylase] ligase |
| 2053 | CP084020.1 | UCH56549.1 JB | 1206 [NA] | 401 [AA] | 2220957-2222162 | LCQ52_09900 | pyridoxal phosphate-dependent aminotransferase |
| 2054 | CP084020.1 | UCH56550.1 JB | 3069 [NA] | 1022 [AA] | 2225878-2228946 | LCQ52_09925 | Rne/Rng family ribonuclease |
| 2055 | CP084020.1 | UCH56551.1 JB | 204 [NA] | 67 [AA] | 2234653-2234856 | LCQ52_09950 | DUF1778 domain-containing protein |
| 2056 | CP084020.1 | UCH56552.1 JB | 1200 [NA] | 399 [AA] | 2262040-2263239 | LCQ52_10050 | NUDIX hydrolase |
| 2057 | CP084020.1 | UCH56553.1 JB | 777 [NA] | 258 [AA] | 2307140-2307916 | LCQ52_10210 | glycosyltransferase |
| 2058 | CP084020.1 | UCH56554.1 JB | 330 [NA] | 109 [AA] | 2326324-2326653 | LCQ52_10300 | hypothetical protein |
| 2059 | CP084020.1 | UCH56555.1 JB | 1365 [NA] | 454 [AA] | 2347566-2348930 | LCQ52_10370 | glycoside hydrolase family 27 protein |
| 2060 | CP084020.1 | UCH56556.1 JB | 1077 [NA] | 358 [AA] | 2355828-2356904 | LCQ52_10395 | hypothetical protein |
| 2061 | CP084020.1 | UCH56557.1 JB | 1707 [NA] | 568 [AA] | 2371460-2373166 | LCQ52_10455 | bacterial Ig-like domain-containing protein |
| 2062 | CP084020.1 | UCH56558.1 JB | 846 [NA] | 281 [AA] | 2412830-2413675 | LCQ52_10580 | IS3 family transposase |
| 2063 | CP084020.1 | UCH56559.1 JB | 504 [NA] | 167 [AA] | 2501513-2502016 | LCQ52_10885 | NUDIX hydrolase |
| 2064 | CP084020.1 | UCH56560.1 JB | 2271 [NA] | 756 [AA] | 2502013-2504283 | LCQ52_10890 | DUF6049 family protein |
| 2065 | CP084020.1 | UCH56561.1 JB | 864 [NA] | 287 [AA] | 2509981-2510844 | LCQ52_10915 | IS3 family transposase |
| 2066 | CP084020.1 | UCH56562.1 JB | 237 [NA] | 78 [AA] | 21783-22019 | LCQ52_00095 | transposase |
| 2067 | CP084020.1 | UCH56563.1 JB | 1131 [NA] | 376 [AA] | 57034-58164 | LCQ52_00245 | DUF2961 domain-containing protein |
| 2068 | CP084020.1 | UCH56564.1 JB | 1620 [NA] | 539 [AA] | 84764-86383 | LCQ52_00350 | amidohydrolase family protein |
| 2069 | CP084020.1 | UCH56565.1 JB | 408 [NA] | 135 [AA] | 88281-88688 | LCQ52_00365 | sterol carrier family protein |
| 2070 | CP084020.1 | UCH56566.1 JB | 333 [NA] | 110 [AA] | 129406-129738 | LCQ52_00525 | putative heavy metal-binding protein |
| 2071 | CP084020.1 | UCH56567.1 JB | 2121 [NA] | 706 [AA] | 135016-137136 | LCQ52_00555 | heavy metal translocating P-type ATPase |
| 2072 | CP084020.1 | UCH56568.1 JB | 846 [NA] | 281 [AA] | 163764-164609 | LCQ52_00665 | IS3 family transposase |
| 2073 | CP084020.1 | UCH56569.1 JB | 888 [NA] | 295 [AA] | 1335669-1336556 | LCQ52_06135 | hypothetical protein |
| 2074 | CP084020.1 | UCH56570.1 JB | 903 [NA] | 300 [AA] | 1244335-1245237 | LCQ52_05635 | hypothetical protein |
| 2075 | CP084020.1 | UCH56571.1 JB | 156 [NA] | 51 [AA] | 1245250-1245405 | LCQ52_05640 | hypothetical protein |
| 2076 | CP084021.1 | UCH56572.1 JB | 1101 [NA] | 366 [AA] | 2672-3772 | LCQ52_11005 | replicase |
| 2077 | CP084021.1 | UCH56573.1 JB | 156 [NA] | 51 [AA] | 3820-3975 | LCQ52_11010 | hypothetical protein |
| 2078 | CP084021.1 | UCH56574.1 JB | 1332 [NA] | 443 [AA] | 215-1546 | LCQ52_10995 | MobA/MobL family protein |
| 2079 | CP084021.1 | UCH56575.1 JB | 444 [NA] | 147 [AA] | 1843-2286 | LCQ52_11000 | hypothetical protein |
| 2080 | CP084022.1 | UCH56576.1 JB | 810 [NA] | 269 [AA] | 2456-3265 | LCQ52_11030 | replication initiation protein |
| 2081 | CP084022.1 | UCH56577.1 JB | 324 [NA] | 107 [AA] | 3262-3585 | LCQ52_11035 | helix-turn-helix domain-containing protein |
| 2082 | CP084022.1 | UCH56578.1 JB | 696 [NA] | 231 [AA] | 3666-651 | LCQ52_11015 | hypothetical protein |
| 2083 | CP084022.1 | UCH56579.1 JB | 258 [NA] | 85 [AA] | 950-1207 | LCQ52_11020 | hypothetical protein |
| 2084 | CP084022.1 | UCH56580.1 JB | 282 [NA] | 93 [AA] | 1204-1485 | LCQ52_11025 | ribbon-helix-helix protein, CopG family |