Genome Explorer: Bifidobacterium longum JCM 7009 (SEQF8374.1)
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NCBI Annotation for SEQF8374.1
| Genome selected: Bifidobacterium longum JCM 7009 | |||
| Contigs: | 1 | Bases: | 2673222 bps |
| CDS: | 166 | rRNA: | 12 |
| tmRNA: | 1 | tRNA: | 57 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | CP071248.1 | QSP98612.1 JB | 207 [NA] | 68 [AA] | 866301-866507 | BLI009_03635 | type II toxin-antitoxin system YafQ family toxin |
| 2002 | CP071248.1 | QSP98613.1 JB | 822 [NA] | 273 [AA] | 873483-874304 | BLI009_03670 | TetR/AcrR family transcriptional regulator |
| 2003 | CP071248.1 | QSP98614.1 JB | 1341 [NA] | 446 [AA] | 880292-881632 | BLI009_03700 | MATE family efflux transporter |
| 2004 | CP071248.1 | QSP98615.1 JB | 300 [NA] | 99 [AA] | 902401-902700 | BLI009_03810 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC |
| 2005 | CP071248.1 | QSP98616.1 JB | 783 [NA] | 260 [AA] | 922144-922926 | BLI009_03875 | response regulator transcription factor |
| 2006 | CP071248.1 | QSP98617.1 JB | 1992 [NA] | 663 [AA] | 928022-930013 | BLI009_03900 | cell surface protein |
| 2007 | CP071248.1 | QSP98618.1 JB | 1407 [NA] | 468 [AA] | 960004-961410 | BLI009_04070 | DUF2974 domain-containing protein |
| 2008 | CP071248.1 | QSP98619.1 JB | 189 [NA] | 62 [AA] | 965203-965391 | BLI009_04105 | hypothetical protein |
| 2009 | CP071248.1 | QSP98620.1 JB | 165 [NA] | 54 [AA] | 966253-966417 | BLI009_04115 | flagellar M-ring protein FliF |
| 2010 | CP071248.1 | QSP98621.1 JB | 2823 [NA] | 940 [AA] | 973514-976336 | BLI009_04165 | ATP-dependent DNA helicase RecG |
| 2011 | CP071248.1 | QSP98622.1 JB | 1089 [NA] | 362 [AA] | 1003320-1004408 | BLI009_04280 | 3-deoxy-7-phosphoheptulonate synthase |
| 2012 | CP071248.1 | QSP98623.1 JB | 1062 [NA] | 353 [AA] | 1004708-1005769 | BLI009_04285 | 3-deoxy-7-phosphoheptulonate synthase |
| 2013 | CP071248.1 | QSP98624.1 JB | 258 [NA] | 85 [AA] | 1019528-1019785 | BLI009_04345 | hypothetical protein |
| 2014 | CP071248.1 | QSP98625.1 JB | 1101 [NA] | 366 [AA] | 1037090-1038190 | BLI009_04425 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD |
| 2015 | CP071248.1 | QSP98626.1 JB | 429 [NA] | 142 [AA] | 1058184-1058612 | BLI009_04530 | MerR family transcriptional regulator |
| 2016 | CP071248.1 | QSP98627.1 JB | 1269 [NA] | 422 [AA] | 1067451-1068719 | BLI009_04575 | aminoacyltransferase |
| 2017 | CP071248.1 | QSP98628.1 JB | 1020 [NA] | 339 [AA] | 1099042-1100061 | BLI009_04715 | LacI family DNA-binding transcriptional regulator |
| 2018 | CP071248.1 | QSP98629.1 JB | 1590 [NA] | 529 [AA] | 1106576-1108165 | BLI009_04750 | multidrug efflux MFS transporter |
| 2019 | CP071248.1 | QSP98630.1 JB | 1188 [NA] | 395 [AA] | 1110845-1112032 | BLI009_04765 | hypothetical protein |
| 2020 | CP071248.1 | QSP98631.1 JB | 1077 [NA] | 358 [AA] | 1112199-1113275 | BLI009_04770 | IS30 family transposase |
| 2021 | CP071248.1 | QSP98632.1 JB | 807 [NA] | 268 [AA] | 1118423-1119229 | BLI009_04795 | EamA family transporter |
| 2022 | CP071248.1 | QSP98633.1 JB | 327 [NA] | 108 [AA] | 1142987-1143313 | BLI009_04915 | hypothetical protein |
| 2023 | CP071248.1 | QSP98634.1 JB | 579 [NA] | 192 [AA] | 1152325-1152903 | BLI009_04960 | RNA polymerase sigma factor |
| 2024 | CP071248.1 | QSP98635.1 JB | 609 [NA] | 202 [AA] | 1164811-1165419 | BLI009_05015 | ATP-binding cassette domain-containing protein |
| 2025 | CP071248.1 | QSP98636.1 JB | 1326 [NA] | 441 [AA] | 1166463-1167788 | BLI009_05025 | histidine kinase |
| 2026 | CP071248.1 | QSP98637.1 JB | 327 [NA] | 108 [AA] | 1176293-1176619 | BLI009_05085 | lantibiotic dehydratase |
| 2027 | CP071248.1 | QSP98638.1 JB | 339 [NA] | 112 [AA] | 1181013-1181351 | BLI009_05105 | hypothetical protein |
| 2028 | CP071248.1 | QSP98639.1 JB | 408 [NA] | 135 [AA] | 1181417-1181824 | BLI009_05110 | transcriptional regulator |
| 2029 | CP071248.1 | QSP98640.1 JB | 924 [NA] | 307 [AA] | 1236891-1237814 | BLI009_05395 | branched-chain amino acid ABC transporter permease |
| 2030 | CP071248.1 | QSP98641.1 JB | 333 [NA] | 110 [AA] | 1248459-1248791 | BLI009_05445 | AmmeMemoRadiSam system protein B |
| 2031 | CP071248.1 | QSP98642.1 JB | 351 [NA] | 116 [AA] | 1248831-1249181 | BLI009_05450 | AmmeMemoRadiSam system protein B |
| 2032 | CP071248.1 | QSP98643.1 JB | 456 [NA] | 151 [AA] | 1266981-1267436 | BLI009_05520 | very short patch repair endonuclease |
| 2033 | CP071248.1 | QSP98644.1 JB | 1359 [NA] | 452 [AA] | 1277009-1278367 | BLI009_05580 | exodeoxyribonuclease VII large subunit |
| 2034 | CP071248.1 | QSP98645.1 JB | 2157 [NA] | 718 [AA] | 1306191-1308347 | BLI009_05675 | GGDEF domain-containing protein |
| 2035 | CP071248.1 | QSP98646.1 JB | 429 [NA] | 142 [AA] | 1338329-1338757 | BLI009_05800 | HIT family protein |
| 2036 | CP071248.1 | QSP98647.1 JB | 666 [NA] | 221 [AA] | 1372989-1373654 | BLI009_05975 | TPM domain-containing protein |
| 2037 | CP071248.1 | QSP98648.1 JB | 771 [NA] | 256 [AA] | 1391240-1392010 | BLI009_06040 | amino acid ABC transporter ATP-binding protein |
| 2038 | CP071248.1 | QSP98649.1 JB | 705 [NA] | 234 [AA] | 1404940-1405644 | BLI009_06095 | NINE protein |
| 2039 | CP071248.1 | QSP98650.1 JB | 738 [NA] | 245 [AA] | 1469186-1469923 | BLI009_06365 | vitamin K epoxide reductase family protein |
| 2040 | CP071248.1 | QSP98651.1 JB | 333 [NA] | 110 [AA] | 1513228-1513560 | BLI009_06555 | exodeoxyribonuclease V |
| 2041 | CP071248.1 | QSP98652.1 JB | 801 [NA] | 266 [AA] | 1519312-1520112 | BLI009_06585 | YihY/virulence factor BrkB family protein |
| 2042 | CP071248.1 | QSP98653.1 JB | 411 [NA] | 136 [AA] | 1523821-1524231 | BLI009_06595 | DUF4186 domain-containing protein |
| 2043 | CP071248.1 | QSP98654.1 JB | 600 [NA] | 199 [AA] | 1537725-1538324 | BLI009_06640 | imidazoleglycerol-phosphate dehydratase HisB |
| 2044 | CP071248.1 | QSP98655.1 JB | 1200 [NA] | 399 [AA] | 1542376-1543575 | BLI009_06670 | MFS transporter |
| 2045 | CP071248.1 | QSP98656.1 JB | 846 [NA] | 281 [AA] | 1543894-1544739 | BLI009_06675 | ABC transporter permease |
| 2046 | CP071248.1 | QSP98657.1 JB | 303 [NA] | 100 [AA] | 1560114-1560416 | BLI009_06730 | LysM peptidoglycan-binding domain-containing protein |
| 2047 | CP071248.1 | QSP98658.1 JB | 303 [NA] | 100 [AA] | 1585849-1586151 | BLI009_06860 | type II toxin-antitoxin system RelE/ParE family toxin |
| 2048 | CP071248.1 | QSP98659.1 JB | 297 [NA] | 98 [AA] | 1586189-1586485 | BLI009_06865 | hypothetical protein |
| 2049 | CP071248.1 | QSP98660.1 JB | 852 [NA] | 283 [AA] | 1617593-1618444 | BLI009_06980 | hypothetical protein |
| 2050 | CP071248.1 | QSP98661.1 JB | 753 [NA] | 250 [AA] | 1627982-1628734 | BLI009_07005 | sigma-70 family RNA polymerase sigma factor |
| 2051 | CP071248.1 | QSP98662.1 JB | 723 [NA] | 240 [AA] | 1635605-1636327 | BLI009_07045 | translation initiation factor IF-3 |
| 2052 | CP071248.1 | QSP98663.1 JB | 840 [NA] | 279 [AA] | 1639376-1640215 | BLI009_07070 | ParA family protein |
| 2053 | CP071248.1 | QSP98664.1 JB | 1269 [NA] | 422 [AA] | 1665644-1666912 | BLI009_07185 | class I SAM-dependent RNA methyltransferase |
| 2054 | CP071248.1 | QSP98665.1 JB | 1005 [NA] | 334 [AA] | 1678480-1679484 | BLI009_07235 | DMT family transporter |
| 2055 | CP071248.1 | QSP98666.1 JB | 1035 [NA] | 344 [AA] | 1688842-1689876 | BLI009_07285 | IS30 family transposase |
| 2056 | CP071248.1 | QSP98667.1 JB | 750 [NA] | 249 [AA] | 1694012-1694761 | BLI009_07305 | Fic family protein |
| 2057 | CP071248.1 | QSP98668.1 JB | 636 [NA] | 211 [AA] | 1698073-1698708 | BLI009_07315 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
| 2058 | CP071248.1 | QSP98669.1 JB | 663 [NA] | 220 [AA] | 1714032-1714694 | BLI009_07390 | DUF4192 family protein |
| 2059 | CP071248.1 | QSP98670.1 JB | 294 [NA] | 97 [AA] | 1731904-1732197 | BLI009_07440 | DUF4193 domain-containing protein |
| 2060 | CP071248.1 | QSP98671.1 JB | 189 [NA] | 62 [AA] | 1736380-1736568 | BLI009_07465 | helix-turn-helix transcriptional regulator |
| 2061 | CP071248.1 | QSP98672.1 JB | 276 [NA] | 91 [AA] | 1742345-1742620 | BLI009_07495 | hypothetical protein |
| 2062 | CP071248.1 | QSP98673.1 JB | 843 [NA] | 280 [AA] | 1749518-1750360 | BLI009_07530 | Fic family protein |
| 2063 | CP071248.1 | QSP98674.1 JB | 702 [NA] | 233 [AA] | 1758787-1759488 | BLI009_07575 | lantibiotic protection ABC transporter ATP-binding protein |
| 2064 | CP071248.1 | QSP98675.1 JB | 666 [NA] | 221 [AA] | 1761829-1762494 | BLI009_07595 | response regulator transcription factor |
| 2065 | CP071248.1 | QSP98676.1 JB | 894 [NA] | 297 [AA] | 1770065-1770958 | BLI009_07635 | glutamate ABC transporter substrate-binding protein |
| 2066 | CP071248.1 | QSP98677.1 JB | 498 [NA] | 165 [AA] | 1774408-1774905 | BLI009_07645 | helix-hairpin-helix domain-containing protein |
| 2067 | CP071248.1 | QSP98678.1 JB | 474 [NA] | 157 [AA] | 1820497-1820970 | BLI009_07905 | DJ-1/PfpI family protein |
| 2068 | CP071248.1 | QSP98679.1 JB | 1377 [NA] | 458 [AA] | 1832003-1833379 | BLI009_07975 | HAMP domain-containing histidine kinase |
| 2069 | CP071248.1 | QSP98680.1 JB | 672 [NA] | 223 [AA] | 1833496-1834167 | BLI009_07980 | response regulator transcription factor |
| 2070 | CP071248.1 | QSP98681.1 JB | 585 [NA] | 194 [AA] | 1875144-1875728 | BLI009_08155 | HIT domain-containing protein |
| 2071 | CP071248.1 | QSP98682.1 JB | 432 [NA] | 143 [AA] | 1879038-1879469 | BLI009_08180 | preprotein translocase subunit YajC |
| 2072 | CP071248.1 | QSP98683.1 JB | 465 [NA] | 154 [AA] | 1903441-1903905 | BLI009_08295 | hypothetical protein |
| 2073 | CP071248.1 | QSP98684.1 JB | 300 [NA] | 99 [AA] | 1920297-1920596 | BLI009_08390 | DUF2316 family protein |
| 2074 | CP071248.1 | QSP98685.1 JB | 408 [NA] | 135 [AA] | 1932520-1932927 | BLI009_08475 | hypothetical protein |
| 2075 | CP071248.1 | QSP98686.1 JB | 963 [NA] | 320 [AA] | 1957950-1958912 | BLI009_08615 | aspartate carbamoyltransferase |
| 2076 | CP071248.1 | QSP98687.1 JB | 399 [NA] | 132 [AA] | 1974786-1975184 | BLI009_08690 | EamA family transporter |
| 2077 | CP071248.1 | QSP98688.1 JB | 183 [NA] | 60 [AA] | 1983745-1983927 | BLI009_08740 | hypothetical protein |
| 2078 | CP071248.1 | QSP98689.1 JB | 792 [NA] | 263 [AA] | 2015493-2016284 | BLI009_08870 | trimeric intracellular cation channel family protein |
| 2079 | CP071248.1 | QSP98690.1 JB | 339 [NA] | 112 [AA] | 2030307-2030645 | BLI009_08930 | histidine triad nucleotide-binding protein |
| 2080 | CP071248.1 | QSP98691.1 JB | 1455 [NA] | 484 [AA] | 2038773-2040227 | BLI009_08980 | Fe-S cluster assembly protein SufB |
| 2081 | CP071248.1 | QSP98692.1 JB | 294 [NA] | 97 [AA] | 2053107-2053400 | BLI009_09045 | type II toxin-antitoxin system RelB/DinJ family antitoxin |
| 2082 | CP071248.1 | QSP98693.1 JB | 984 [NA] | 327 [AA] | 2078851-2079834 | BLI009_09195 | ABC transporter ATP-binding protein |
| 2083 | CP071248.1 | QSP98694.1 JB | 1290 [NA] | 429 [AA] | 2089218-2090507 | BLI009_09235 | nitrate reductase |
| 2084 | CP071248.1 | QSP98695.1 JB | 1965 [NA] | 654 [AA] | 2095767-2097731 | BLI009_09270 | ferrous iron transport protein B |
| 2085 | CP071248.1 | QSP98696.1 JB | 663 [NA] | 220 [AA] | 2101262-2101924 | BLI009_09290 | TetR/AcrR family transcriptional regulator |
| 2086 | CP071248.1 | QSP98697.1 JB | 315 [NA] | 104 [AA] | 2166240-2166554 | BLI009_09565 | helix-turn-helix transcriptional regulator |
| 2087 | CP071248.1 | QSP98698.1 JB | 2121 [NA] | 706 [AA] | 2184969-2187089 | BLI009_09675 | glycogen debranching protein GlgX |
| 2088 | CP071248.1 | QSP98699.1 JB | 1242 [NA] | 413 [AA] | 2199149-2200390 | BLI009_09740 | CHAP domain-containing protein |
| 2089 | CP071248.1 | QSP98700.1 JB | 996 [NA] | 331 [AA] | 2211431-2212426 | BLI009_09800 | hypothetical protein |
| 2090 | CP071248.1 | QSP98701.1 JB | 4788 [NA] | 1595 [AA] | 2212791-2217578 | BLI009_09805 | LPXTG cell wall anchor domain-containing protein |
| 2091 | CP071248.1 | QSP98702.1 JB | 1617 [NA] | 538 [AA] | 2217969-2219585 | BLI009_09810 | hypothetical protein |
| 2092 | CP071248.1 | QSP98703.1 JB | 942 [NA] | 313 [AA] | 2224122-2225063 | BLI009_09820 | class C sortase |
| 2093 | CP071248.1 | QSP98704.1 JB | 267 [NA] | 88 [AA] | 2232998-2233264 | BLI009_09865 | type II toxin-antitoxin system Phd/YefM family antitoxin |
| 2094 | CP071248.1 | QSP98705.1 JB | 255 [NA] | 84 [AA] | 2233264-2233518 | BLI009_09870 | Txe/YoeB family addiction module toxin |
| 2095 | CP071248.1 | QSP98706.1 JB | 246 [NA] | 81 [AA] | 2235837-2236082 | BLI009_09890 | hypothetical protein |
| 2096 | CP071248.1 | QSP98707.1 JB | 459 [NA] | 152 [AA] | 2244855-2245313 | BLI009_09935 | hypothetical protein |
| 2097 | CP071248.1 | QSP98708.1 JB | 1290 [NA] | 429 [AA] | 2245310-2246599 | BLI009_09940 | protein kinase |
| 2098 | CP071248.1 | QSP98709.1 JB | 840 [NA] | 279 [AA] | 2260378-2261217 | BLI009_10025 | hypothetical protein |
| 2099 | CP071248.1 | QSP98710.1 JB | 552 [NA] | 183 [AA] | 2269780-2270331 | BLI009_10075 | hypothetical protein |
| 2100 | CP071248.1 | QSP98711.1 JB | 1122 [NA] | 373 [AA] | 2281893-2283014 | BLI009_10160 | DUF2637 domain-containing protein |
| 2101 | CP071248.1 | QSP98712.1 JB | 426 [NA] | 141 [AA] | 2285220-2285645 | BLI009_10175 | hypothetical protein |
| 2102 | CP071248.1 | QSP98713.1 JB | 1236 [NA] | 411 [AA] | 2293196-2294431 | BLI009_10220 | histidine kinase |
| 2103 | CP071248.1 | QSP98714.1 JB | 363 [NA] | 120 [AA] | 2312432-2312794 | BLI009_10315 | metallopeptidase family protein |
| 2104 | CP071248.1 | QSP98715.1 JB | 906 [NA] | 301 [AA] | 2318652-2319557 | BLI009_10335 | LCP family protein |
| 2105 | CP071248.1 | QSP98716.1 JB | 1017 [NA] | 338 [AA] | 2364116-2365132 | BLI009_10530 | NAD kinase |
| 2106 | CP071248.1 | QSP98717.1 JB | 366 [NA] | 121 [AA] | 2417195-2417560 | BLI009_10790 | fluoride efflux transporter CrcB |
| 2107 | CP071248.1 | QSP98718.1 JB | 1647 [NA] | 548 [AA] | 2444906-2446552 | BLI009_10920 | type VI secretion protein ImpB |
| 2108 | CP071248.1 | QSP98719.1 JB | 456 [NA] | 151 [AA] | 2467520-2467975 | BLI009_11020 | ABC transporter ATP-binding protein |
| 2109 | CP071248.1 | QSP98720.1 JB | 2199 [NA] | 732 [AA] | 2480955-2483153 | BLI009_11090 | alpha-L-arabinofuranosidase |
| 2110 | CP071248.1 | QSP98721.1 JB | 942 [NA] | 313 [AA] | 2506721-2507662 | BLI009_11190 | ABC transporter permease |
| 2111 | CP071248.1 | QSP98722.1 JB | 777 [NA] | 258 [AA] | 2516725-2517501 | BLI009_11230 | 23S rRNA pseudouridylate synthase |
| 2112 | CP071248.1 | QSP98723.1 JB | 768 [NA] | 255 [AA] | 2519657-2520424 | BLI009_11240 | amino acid ABC transporter ATP-binding protein |
| 2113 | CP071248.1 | QSP98724.1 JB | 4296 [NA] | 1431 [AA] | 2551589-2555884 | BLI009_11355 | PD-(D/E)XK nuclease family protein |
| 2114 | CP071248.1 | QSP98725.1 JB | 585 [NA] | 194 [AA] | 2590341-2590925 | BLI009_11465 | ATP-binding protein |
| 2115 | CP071248.1 | QSP98726.1 JB | 1092 [NA] | 363 [AA] | 2595965-2597056 | BLI009_11490 | LacI family DNA-binding transcriptional regulator |
| 2116 | CP071248.1 | QSP98727.1 JB | 1086 [NA] | 361 [AA] | 2611839-2612924 | BLI009_11555 | lipoate--protein ligase family protein |
| 2117 | CP071248.1 | QSP98728.1 JB | 876 [NA] | 291 [AA] | 2633484-2634359 | BLI009_11650 | hypothetical protein |
| 2118 | CP071248.1 | QSP98729.1 JB | 711 [NA] | 236 [AA] | 2642292-2643002 | BLI009_11700 | tyrosine-type recombinase/integrase |
| 2119 | CP071248.1 | QSP98730.1 JB | 1359 [NA] | 452 [AA] | 2643141-2644499 | BLI009_11705 | IS256 family transposase |
| 2120 | CP071248.1 | QSP98731.1 JB | 1023 [NA] | 340 [AA] | 2650560-2651582 | BLI009_11735 | linear amide C-N hydrolase |
| 2121 | CP071248.1 | QSP98732.1 JB | 1005 [NA] | 334 [AA] | 2662652-2663656 | BLI009_11800 | DNA-protecting protein DprA |
| 2122 | CP071248.1 | QSP98733.1 JB | 219 [NA] | 72 [AA] | 1360707-1360925 | BLI009_05905 | hypothetical protein |
| 2123 | CP071248.1 | QSP98734.1 JB | 300 [NA] | 99 [AA] | 1463459-1463758 | BLI009_06320 | APC family permease |
| 2124 | CP071248.1 | QSP98735.1 JB | 276 [NA] | 91 [AA] | 1465882-1466157 | BLI009_06340 | hypothetical protein |
| 2125 | CP071248.1 | QSP98736.1 JB | 255 [NA] | 84 [AA] | 2072688-2072942 | BLI009_09160 | hypothetical protein |
| 2126 | CP071248.1 | QSP98737.1 JB | 354 [NA] | 117 [AA] | 2184055-2184408 | BLI009_09660 | hypothetical protein |
| 2127 | CP071248.1 | QSP98738.1 JB | 156 [NA] | 51 [AA] | 2184688-2184843 | BLI009_09670 | hypothetical protein |
| 2128 | CP071248.1 | QSP98739.1 JB | 372 [NA] | 123 [AA] | 446010-446381 | BLI009_01910 | hypothetical protein |
| 2129 | CP071248.1 | QSP98740.1 JB | 555 [NA] | 184 [AA] | 592795-593349 | BLI009_02460 | hypothetical protein |
| 2130 | CP071248.1 | QSP98741.1 JB | 546 [NA] | 181 [AA] | 640164-640709 | BLI009_02670 | hypothetical protein |
| 2131 | CP071248.1 | QSP98742.1 JB | 396 [NA] | 131 [AA] | 929979-930374 | BLI009_03905 | hypothetical protein |