Genome Explorer: Neisseria perflava UMB0210 (SEQF9810.1)
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NCBI Annotation for SEQF9810.1
| Genome selected: Neisseria perflava UMB0210 | |||
| Contigs: | 22 | Bases: | 2311158 bps |
| CDS: | 51 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 50 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | PKJP01000010.1 | PLA49055.1 JB | 300 [NA] | 99 [AA] | 3689-3988 | CYJ99_10480 | hypothetical protein |
| 2002 | PKJP01000010.1 | PLA49056.1 JB | 1236 [NA] | 411 [AA] | 5603-6838 | CYJ99_10490 | hypothetical protein |
| 2003 | PKJP01000010.1 | PLA49057.1 JB | 1110 [NA] | 369 [AA] | 7411-8520 | CYJ99_10495 | hypothetical protein |
| 2004 | PKJP01000010.1 | PLA49058.1 JB | 510 [NA] | 169 [AA] | 8612-9121 | CYJ99_10500 | hypothetical protein |
| 2005 | PKJP01000010.1 | PLA49059.1 JB | 531 [NA] | 176 [AA] | 9375-9905 | CYJ99_10505 | hypothetical protein |
| 2006 | PKJP01000010.1 | PLA49060.1 JB | 393 [NA] | 130 [AA] | 10315-10707 | CYJ99_10510 | hypothetical protein |
| 2007 | PKJP01000010.1 | PLA49061.1 JB | 486 [NA] | 161 [AA] | 11166-11651 | CYJ99_10515 | hypothetical protein |
| 2008 | PKJP01000010.1 | PLA49062.1 JB | 396 [NA] | 131 [AA] | 11665-12060 | CYJ99_10520 | hypothetical protein |
| 2009 | PKJP01000010.1 | PLA49063.1 JB | 390 [NA] | 129 [AA] | 12066-12455 | CYJ99_10525 | hypothetical protein |
| 2010 | PKJP01000010.1 | PLA49064.1 JB | 3918 [NA] | 1305 [AA] | 12637-16554 | CYJ99_10530 | sugar-binding protein |
| 2011 | PKJP01000010.1 | PLA49065.1 JB | 591 [NA] | 196 [AA] | 16776-17366 | CYJ99_10535 | hypothetical protein |
| 2012 | PKJP01000010.1 | PLA49066.1 JB | 855 [NA] | 284 [AA] | 17353-18207 | CYJ99_10540 | hypothetical protein |
| 2013 | PKJP01000010.1 | PLA49067.1 JB | 2280 [NA] | 759 [AA] | 18217-20496 | CYJ99_10545 | type VI secretion system tip protein VgrG |
| 2014 | PKJP01000010.1 | PLA49068.1 JB | 231 [NA] | 76 [AA] | 21292->21524 | CYJ99_10550 | hypothetical protein |
| 2015 | PKJP01000010.1 | PLA49069.1 JB | 804 [NA] | 268 [AA] | <21697-22500 | CYJ99_10555 | hypothetical protein |
| 2016 | PKJP01000010.1 | PLA49070.1 JB | 1560 [NA] | 519 [AA] | 22518-24077 | CYJ99_10560 | hypothetical protein |
| 2017 | PKJP01000010.1 | PLA49071.1 JB | 953 [NA] | 318 [AA] | <25749-26701 | CYJ99_10570 | hypothetical protein |
| 2018 | PKJP01000010.1 | PLA49072.1 JB | 2820 [NA] | 939 [AA] | 26845-29664 | CYJ99_10575 | type VI secretion system ATPase TssH |
| 2019 | PKJP01000010.1 | PLA49073.1 JB | 489 [NA] | 162 [AA] | 29736-30224 | CYJ99_10580 | type VI secretion system tube protein Hcp |
| 2020 | PKJP01000010.1 | PLA49074.1 JB | 1629 [NA] | 542 [AA] | 30295-31923 | CYJ99_10585 | OmpA family protein |
| 2021 | PKJP01000010.1 | PLA49075.1 JB | 663 [NA] | 220 [AA] | 31941-32603 | CYJ99_10590 | DotU family type IV/VI secretion system protein |
| 2022 | PKJP01000010.1 | PLA49076.1 JB | 1347 [NA] | 448 [AA] | 32605-33951 | CYJ99_10595 | type VI secretion system baseplate subunit TssK |
| 2023 | PKJP01000010.1 | PLA49077.1 JB | 501 [NA] | 166 [AA] | 34111-34611 | CYJ99_10600 | type VI secretion system contractile sheath small subunit |
| 2024 | PKJP01000010.1 | PLA49078.1 JB | 1536 [NA] | 511 [AA] | 34650-36185 | CYJ99_10605 | type VI secretion system contractile sheath large subunit |
| 2025 | PKJP01000010.1 | PLA49079.1 JB | 1527 [NA] | 508 [AA] | 24077-25603 | CYJ99_10565 | type IV secretion protein Rhs |
| 2026 | PKJP01000011.1 | PLA48917.1 JB | 87 [NA] | 29 [AA] | <1-87 | CYJ99_10610 | elongation factor Tu |
| 2027 | PKJP01000011.1 | PLA48918.1 JB | 252 [NA] | 83 [AA] | 510-761 | CYJ99_10630 | ferredoxin |
| 2028 | PKJP01000011.1 | PLA48919.1 JB | 573 [NA] | 190 [AA] | 884-1456 | CYJ99_10635 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD |
| 2029 | PKJP01000011.1 | PLA48920.1 JB | 384 [NA] | 127 [AA] | 1589-1972 | CYJ99_10640 | XRE family transcriptional regulator |
| 2030 | PKJP01000011.1 | PLA48921.1 JB | 447 [NA] | 148 [AA] | 2686-3132 | CYJ99_10645 | hypothetical protein |
| 2031 | PKJP01000011.1 | PLA48922.1 JB | 2307 [NA] | 768 [AA] | 3207-5513 | CYJ99_10650 | type I DNA topoisomerase |
| 2032 | PKJP01000011.1 | PLA48923.1 JB | 456 [NA] | 151 [AA] | 5587-6042 | CYJ99_10655 | DUF494 domain-containing protein |
| 2033 | PKJP01000011.1 | PLA48924.1 JB | 1191 [NA] | 396 [AA] | 6067-7257 | CYJ99_10660 | DNA-protecting protein DprA |
| 2034 | PKJP01000011.1 | PLA48925.1 JB | 1275 [NA] | 424 [AA] | 7492-8766 | CYJ99_10665 | sigma-54-dependent Fis family transcriptional regulator |
| 2035 | PKJP01000011.1 | PLA48926.1 JB | 2127 [NA] | 708 [AA] | 8753-10879 | CYJ99_10670 | PAS domain-containing sensor histidine kinase |
| 2036 | PKJP01000011.1 | PLA48927.1 JB | 594 [NA] | 197 [AA] | 10883-11476 | CYJ99_10675 | DUF4390 domain-containing protein |
| 2037 | PKJP01000011.1 | PLA48928.1 JB | 1260 [NA] | 419 [AA] | 11442-12701 | CYJ99_10680 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB |
| 2038 | PKJP01000011.1 | PLA48929.1 JB | 519 [NA] | 172 [AA] | 12748-13266 | CYJ99_10685 | O-acetyl-ADP-ribose deacetylase |
| 2039 | PKJP01000011.1 | PLA48930.1 JB | 927 [NA] | 308 [AA] | 13300-14226 | CYJ99_10690 | methionyl-tRNA formyltransferase |
| 2040 | PKJP01000011.1 | PLA48931.1 JB | 504 [NA] | 167 [AA] | 14361-14864 | CYJ99_10695 | peptide deformylase |
| 2041 | PKJP01000011.1 | PLA48932.1 JB | 1266 [NA] | 421 [AA] | 15099-16364 | CYJ99_10700 | peptidoglycan-binding protein LysM |
| 2042 | PKJP01000011.1 | PLA48933.1 JB | 1416 [NA] | 471 [AA] | 16673-18088 | CYJ99_10705 | hypothetical protein |
| 2043 | PKJP01000011.1 | PLA48934.1 JB | 1473 [NA] | 490 [AA] | 18290-19762 | CYJ99_10710 | pyruvate kinase |
| 2044 | PKJP01000011.1 | PLA48935.1 JB | 504 [NA] | 167 [AA] | 19976-20479 | CYJ99_10715 | hypothetical protein |
| 2045 | PKJP01000011.1 | PLA48936.1 JB | 864 [NA] | 287 [AA] | 20697-21560 | CYJ99_10720 | DUF3579 domain-containing protein |
| 2046 | PKJP01000011.1 | PLA48937.1 JB | 666 [NA] | 221 [AA] | 21836-22501 | CYJ99_10725 | hypothetical protein |
| 2047 | PKJP01000011.1 | PLA48938.1 JB | 459 [NA] | 152 [AA] | 22694-23152 | CYJ99_10730 | aspartate carbamoyltransferase regulatory subunit |
| 2048 | PKJP01000011.1 | PLA48939.1 JB | 921 [NA] | 306 [AA] | 23163-24083 | CYJ99_10735 | aspartate carbamoyltransferase |
| 2049 | PKJP01000011.1 | PLA48940.1 JB | 414 [NA] | 137 [AA] | 25008-25421 | CYJ99_10740 | prepilin cleavage protein |
| 2050 | PKJP01000011.1 | PLA48941.1 JB | 288 [NA] | 95 [AA] | 25682-25969 | CYJ99_10745 | topoisomerase |
| 2051 | PKJP01000012.1 | PLA48896.1 JB | 678 [NA] | 225 [AA] | 879-1556 | CYJ99_10755 | TIGR02117 family protein |
| 2052 | PKJP01000012.1 | PLA48897.1 JB | 171 [NA] | 56 [AA] | 1679-1849 | CYJ99_10760 | sodium:proton antiporter |
| 2053 | PKJP01000012.1 | PLA48898.1 JB | 1044 [NA] | 347 [AA] | 1835-2878 | CYJ99_10765 | 3-deoxy-7-phosphoheptulonate synthase |
| 2054 | PKJP01000012.1 | PLA48899.1 JB | 2178 [NA] | 725 [AA] | 3068-5245 | CYJ99_10770 | TonB-dependent siderophore receptor |
| 2055 | PKJP01000012.1 | PLA48900.1 JB | 606 [NA] | 201 [AA] | 5457-6062 | CYJ99_10775 | NAD(P)H-quinone oxidoreductase |
| 2056 | PKJP01000012.1 | PLA48901.1 JB | 1203 [NA] | 400 [AA] | 6162-7364 | CYJ99_10780 | hypothetical protein |
| 2057 | PKJP01000012.1 | PLA48902.1 JB | 1782 [NA] | 593 [AA] | 7464-9245 | CYJ99_10785 | ABC transporter substrate-binding protein |
| 2058 | PKJP01000012.1 | PLA48903.1 JB | 279 [NA] | 92 [AA] | 9660-9938 | CYJ99_10790 | ArsR family transcriptional regulator |
| 2059 | PKJP01000012.1 | PLA48904.1 JB | 189 [NA] | 62 [AA] | 9919-10107 | CYJ99_10795 | YeeE/YedE protein |
| 2060 | PKJP01000012.1 | PLA48905.1 JB | 771 [NA] | 256 [AA] | 10106-10876 | CYJ99_10800 | exodeoxyribonuclease III |
| 2061 | PKJP01000012.1 | PLA48906.1 JB | 540 [NA] | 179 [AA] | 11024-11563 | CYJ99_10805 | hypothetical protein |
| 2062 | PKJP01000012.1 | PLA48907.1 JB | 810 [NA] | 269 [AA] | 11635-12444 | CYJ99_10810 | glutamate racemase |
| 2063 | PKJP01000012.1 | PLA48908.1 JB | 1230 [NA] | 409 [AA] | 12506-13735 | CYJ99_10815 | Bcr/CflA family drug resistance efflux transporter |
| 2064 | PKJP01000012.1 | PLA48909.1 JB | 1530 [NA] | 509 [AA] | 13977-15506 | CYJ99_10820 | DUF853 domain-containing protein |
| 2065 | PKJP01000012.1 | PLA48910.1 JB | 489 [NA] | 162 [AA] | 15637-16125 | CYJ99_10825 | N-acetyltransferase |
| 2066 | PKJP01000012.1 | PLA48911.1 JB | 1356 [NA] | 451 [AA] | 16175-17530 | CYJ99_10830 | hypothetical protein |
| 2067 | PKJP01000012.1 | PLA48912.1 JB | 273 [NA] | 90 [AA] | 17546-17818 | CYJ99_10835 | ACT domain-containing protein |
| 2068 | PKJP01000012.1 | PLA48913.1 JB | 1146 [NA] | 381 [AA] | 17926-19071 | CYJ99_10840 | polyamine ABC transporter substrate-binding protein |
| 2069 | PKJP01000012.1 | PLA48914.1 JB | 546 [NA] | 181 [AA] | 19391-19936 | CYJ99_10850 | RNA pyrophosphohydrolase |
| 2070 | PKJP01000012.1 | PLA48915.1 JB | 1986 [NA] | 661 [AA] | 20005-21990 | CYJ99_10855 | DNA topoisomerase IV subunit B |
| 2071 | PKJP01000012.1 | PLA48916.1 JB | 578 [NA] | 193 [AA] | <1-578 | CYJ99_10750 | type VI secretion system tip protein VgrG |
| 2072 | PKJP01000013.1 | PLA48815.1 JB | 329 [NA] | 109 [AA] | <1-329 | CYJ99_10865 | hypothetical protein |
| 2073 | PKJP01000013.1 | PLA48816.1 JB | 618 [NA] | 205 [AA] | 877-1494 | CYJ99_10870 | nucleoside-diphosphate sugar epimerase |
| 2074 | PKJP01000013.1 | PLA48817.1 JB | 1821 [NA] | 606 [AA] | 1587-3407 | CYJ99_10875 | putative heme utilization radical SAM enzyme HutW |
| 2075 | PKJP01000013.1 | PLA48818.1 JB | 726 [NA] | 241 [AA] | 3682-4407 | CYJ99_10880 | ABC transporter ATP-binding protein |
| 2076 | PKJP01000013.1 | PLA48819.1 JB | 942 [NA] | 313 [AA] | 4454-5395 | CYJ99_10885 | iron ABC transporter permease |
| 2077 | PKJP01000013.1 | PLA48820.1 JB | 792 [NA] | 263 [AA] | 5538-6329 | CYJ99_10890 | ABC transporter substrate-binding protein |
| 2078 | PKJP01000013.1 | PLA48821.1 JB | 2199 [NA] | 732 [AA] | 6402-8600 | CYJ99_10895 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
| 2079 | PKJP01000013.1 | PLA48822.1 JB | 3270 [NA] | 1089 [AA] | 9203-12472 | CYJ99_10900 | receptor |
| 2080 | PKJP01000013.1 | PLA48823.1 JB | 882 [NA] | 293 [AA] | 12691-13572 | CYJ99_10905 | nicotinate-nucleotide diphosphorylase (carboxylating) |
| 2081 | PKJP01000013.1 | PLA48824.1 JB | 939 [NA] | 312 [AA] | 13647-14585 | CYJ99_10910 | hypothetical protein |
| 2082 | PKJP01000013.1 | PLA48825.1 JB | 1113 [NA] | 370 [AA] | 14743-15855 | CYJ99_10920 | quinolinate synthase |
| 2083 | PKJP01000013.1 | PLA48826.1 JB | 1509 [NA] | 502 [AA] | 15907-17415 | CYJ99_10925 | L-aspartate oxidase |
| 2084 | PKJP01000013.1 | PLA48827.1 JB | 1008 [NA] | 335 [AA] | 18133-19140 | CYJ99_10935 | IS5/IS1182 family transposase |
| 2085 | PKJP01000013.1 | PLA48828.1 JB | 609 [NA] | 202 [AA] | 19274-19882 | CYJ99_10940 | hypothetical protein |
| 2086 | PKJP01000013.1 | PLA48829.1 JB | 1059 [NA] | 352 [AA] | 19879-20937 | CYJ99_10945 | hypothetical protein |
| 2087 | PKJP01000014.1 | PLA48801.1 JB | 2106 [NA] | 701 [AA] | 166-2271 | CYJ99_10960 | elongation factor G |
| 2088 | PKJP01000014.1 | PLA48802.1 JB | 471 [NA] | 156 [AA] | 2290-2760 | CYJ99_10965 | 30S ribosomal protein S7 |
| 2089 | PKJP01000014.1 | PLA48803.1 JB | 372 [NA] | 123 [AA] | 2878-3249 | CYJ99_10970 | 30S ribosomal protein S12 |
| 2090 | PKJP01000014.1 | PLA48804.1 JB | 4176 [NA] | 1391 [AA] | 3503-7678 | CYJ99_10975 | DNA-directed RNA polymerase subunit beta' |
| 2091 | PKJP01000014.1 | PLA48805.1 JB | 4179 [NA] | 1392 [AA] | 7834-12012 | CYJ99_10980 | DNA-directed RNA polymerase subunit beta |
| 2092 | PKJP01000014.1 | PLA48806.1 JB | 372 [NA] | 123 [AA] | 12202-12573 | CYJ99_10985 | 50S ribosomal protein L7/L12 |
| 2093 | PKJP01000014.1 | PLA48807.1 JB | 501 [NA] | 166 [AA] | 12631-13131 | CYJ99_10990 | 50S ribosomal protein L10 |
| 2094 | PKJP01000014.1 | PLA48808.1 JB | 177 [NA] | 58 [AA] | 13115-13291 | CYJ99_10995 | hypothetical protein |
| 2095 | PKJP01000014.1 | PLA48809.1 JB | 696 [NA] | 231 [AA] | 13354-14049 | CYJ99_11000 | 50S ribosomal protein L1 |
| 2096 | PKJP01000014.1 | PLA48810.1 JB | 435 [NA] | 144 [AA] | 14049-14483 | CYJ99_11005 | 50S ribosomal protein L11 |
| 2097 | PKJP01000014.1 | PLA48811.1 JB | 534 [NA] | 177 [AA] | 14588-15121 | CYJ99_11010 | transcription termination/antitermination protein NusG |
| 2098 | PKJP01000014.1 | PLA48812.1 JB | 276 [NA] | 91 [AA] | 15124-15399 | CYJ99_11015 | preprotein translocase subunit SecE |
| 2099 | PKJP01000014.1 | PLA48813.1 JB | 77 [NA] | 26 [AA] | <1-77 | CYJ99_10955 | elongation factor Tu |
| 2100 | PKJP01000014.1 | PLA48814.1 JB | 87 [NA] | 28 [AA] | 15613->15699 | CYJ99_11025 | elongation factor Tu |
| 2101 | PKJP01000015.1 | PLA48736.1 JB | 183 [NA] | 60 [AA] | 421-603 | CYJ99_11035 | hypothetical protein |
| 2102 | PKJP01000015.1 | PLA48737.1 JB | 762 [NA] | 253 [AA] | 606-1367 | CYJ99_11040 | hypothetical protein |
| 2103 | PKJP01000015.1 | PLA48738.1 JB | 273 [NA] | 90 [AA] | 1369-1641 | CYJ99_11045 | zinc/iron-chelating domain-containing protein |
| 2104 | PKJP01000015.1 | PLA48739.1 JB | 1674 [NA] | 557 [AA] | 1634-3307 | CYJ99_11050 | hypothetical protein |
| 2105 | PKJP01000015.1 | PLA48740.1 JB | 1836 [NA] | 611 [AA] | 3332-5167 | CYJ99_11055 | hypothetical protein |
| 2106 | PKJP01000015.1 | PLA48741.1 JB | 513 [NA] | 170 [AA] | 5164-5676 | CYJ99_11060 | hypothetical protein |
| 2107 | PKJP01000015.1 | PLA48742.1 JB | 834 [NA] | 277 [AA] | 5744-6577 | CYJ99_11065 | hypothetical protein |
| 2108 | PKJP01000015.1 | PLA48743.1 JB | 168 [NA] | 55 [AA] | 7133-7300 | CYJ99_11070 | hypothetical protein |
| 2109 | PKJP01000015.1 | PLA48744.1 JB | 741 [NA] | 246 [AA] | 8969-9709 | CYJ99_11085 | hypothetical protein |
| 2110 | PKJP01000015.1 | PLA48745.1 JB | 180 [NA] | 59 [AA] | 9900-10079 | CYJ99_11090 | hypothetical protein |
| 2111 | PKJP01000015.1 | PLA48746.1 JB | 384 [NA] | 127 [AA] | 10655-11038 | CYJ99_11095 | hypothetical protein |
| 2112 | PKJP01000015.1 | PLA48747.1 JB | 264 [NA] | 87 [AA] | 11085-11348 | CYJ99_11100 | Txe/YoeB family addiction module toxin |
| 2113 | PKJP01000015.1 | PLA48748.1 JB | 249 [NA] | 82 [AA] | 11345-11593 | CYJ99_11105 | type II toxin-antitoxin system prevent-host-death family antitoxin |
| 2114 | PKJP01000015.1 | PLA48749.1 JB | 649 [NA] | 216 [AA] | 12951->13599 | CYJ99_11115 | IS1595 family transposase |
| 2115 | PKJP01000015.1 | PLA48750.1 JB | 582 [NA] | 193 [AA] | 7773-8354 | CYJ99_11075 | DNA polymerase V |
| 2116 | PKJP01000016.1 | PLA48733.1 JB | 2028 [NA] | 675 [AA] | 252-2279 | CYJ99_11120 | excinuclease ABC subunit B |
| 2117 | PKJP01000016.1 | PLA48734.1 JB | 1146 [NA] | 381 [AA] | 2629-3774 | CYJ99_11125 | hypothetical protein |
| 2118 | PKJP01000016.1 | PLA48735.1 JB | 264 [NA] | 87 [AA] | 3823-4086 | CYJ99_11130 | PAAR domain-containing protein |
| 2119 | PKJP01000017.1 | PLA48728.1 JB | 312 [NA] | 103 [AA] | <1-314 | CYJ99_11135 | type VI secretion system tip protein VgrG |
| 2120 | PKJP01000017.1 | PLA48729.1 JB | 876 [NA] | 291 [AA] | 320-1195 | CYJ99_11140 | hypothetical protein |
| 2121 | PKJP01000017.1 | PLA48730.1 JB | 471 [NA] | 156 [AA] | 1237-1707 | CYJ99_11145 | hypothetical protein |
| 2122 | PKJP01000017.1 | PLA48731.1 JB | 1752 [NA] | 583 [AA] | 1778-3529 | CYJ99_11150 | hypothetical protein |
| 2123 | PKJP01000017.1 | PLA48732.1 JB | 93 [NA] | 31 [AA] | 3796->3888 | CYJ99_11155 | IS5 family transposase |
| 2124 | PKJP01000018.1 | PLA48668.1 JB | 1234 [NA] | 411 [AA] | <1->1236 | CYJ99_11160 | hypothetical protein |
| 2125 | PKJP01000019.1 | PLA48667.1 JB | 1185 [NA] | 394 [AA] | 1-1185 | CYJ99_11165 | elongation factor Tu |
| 2126 | PKJP01000020.1 | PLA48666.1 JB | 372 [NA] | 123 [AA] | <1-373 | CYJ99_11170 | type VI secretion system ATPase TssH |
| 2127 | PKJP01000021.1 | PLA48611.1 JB | 333 [NA] | 111 [AA] | <1->334 | CYJ99_11175 | type VI secretion system tip protein VgrG |