HOMD ::species::Leptotrichia sp._HMT_225

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Leptotrichia sp._HMT_225

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Full Lineage: Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Leptotrichiaceae; Leptotrichia; Leptotrichia sp._HMT_225

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to L. buccalis and L. sp. HMT 225 were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.340	0.639	0.026	0.038	0.015	0.027	0.023	0.017	0.005	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.132	2.236	0.023	0.095	0.047	0.071	0.036	0.049	0.017	0.000
Stdev	0.610	1.052	0.153	0.102	0.038	0.063	0.091	0.036	0.009	0.000
Prev	59.740	61.039	24.675	49.351	28.571	31.169	37.662	42.857	25.974	0.000

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.325	0.551	0.012	0.047	0.014	0.022	0.008	0.014	0.004	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.807	1.671	0.028	0.048	0.044	0.065	0.030	0.037	0.001	0.000
Stdev	0.791	1.343	0.050	0.372	0.041	0.056	0.022	0.039	0.013	0.000
Prev	45.270	49.324	12.162	25.000	19.595	25.000	13.514	20.270	10.135	0.000

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 225 and 563 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.789	1.616	0.048	0.124	0.205	0.020	0.086	0.021	0.016	0.001
10^thp	0.000	0.004	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	2.158	4.528	0.155	0.270	0.121	0.051	0.094	0.034	0.032	0.000
Stdev	1.953	3.666	0.092	0.266	0.799	0.036	0.287	0.049	0.035	0.005
Prev	82.432	94.118	74.419	88.571	78.571	56.000	63.636	58.065	60.000	5.000