HOMD ::species::Neisseria flava

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Neisseria flava

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Full Lineage: Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria flava

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to N. flava, N. macacae, N. mucosa, and N. sicca were assigned one fourth to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.615	0.793	0.123	0.291	0.135	0.195	0.045	0.034	0.010	0.001
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.704	2.061	0.204	0.776	0.216	0.354	0.107	0.048	0.027	0.000
Stdev	1.207	1.311	0.364	0.794	0.510	0.421	0.106	0.123	0.022	0.003
Prev	80.519	83.117	54.545	79.221	72.727	72.727	48.052	46.753	40.260	3.896

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to N. flava, N. macacae, N. mucosa, and N. sicca were assigned one-fourth to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.633	1.078	0.115	0.383	0.196	0.422	0.069	0.091	0.025	0.000
10^thp	0.000	0.009	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.375	3.057	0.186	1.146	0.399	1.057	0.188	0.117	0.068	0.000
Stdev	1.147	1.515	0.325	0.794	0.557	0.581	0.140	0.309	0.050	0.000
Prev	85.811	93.243	57.432	86.486	81.757	87.162	65.541	66.892	58.784	0.000

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 099, 609, 682, and 764 were assigned one fourth to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.112	0.190	0.031	0.111	0.796	0.038	0.008	0.020	0.008	0.002
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.140	0.148	0.089	0.308	0.304	0.085	0.019	0.047	0.016	0.001
Stdev	0.380	0.651	0.070	0.220	3.692	0.130	0.016	0.046	0.021	0.006
Prev	62.162	67.647	48.837	71.429	71.429	62.000	60.606	58.065	52.500	10.000