HOMD ::family::Ruminococcaceae

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Family: Ruminococcaceae

Download Options

Full Lineage: Bacteria; Firmicutes; Clostridia; Eubacteriales; Ruminococcaceae
Lower rank member(s): [Genus:Ruminococcaceae_[G-1]] [Genus:Ruminococcaceae_[G-2]] [Genus:Ruminococcaceae_[G-3]]

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.085	0.101	0.005	0.022	0.061	2.379	0.329	0.273	0.157	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.207	0.293	0.013	0.053	0.120	7.167	0.583	0.574	0.303	0.000
Stdev	0.218	0.253	0.020	0.053	0.117	4.029	0.990	0.879	0.450	0.000
Prev	36.364	38.961	11.688	32.468	59.740	88.312	64.935	71.429	57.143	0.000

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.079	0.092	0.004	0.042	0.106	2.040	0.337	0.248	0.166	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.052	0.000	0.000	0.000	0.000
90^thp	0.242	0.250	0.003	0.131	0.230	4.406	0.766	0.664	0.369	0.000
Stdev	0.193	0.238	0.012	0.099	0.210	3.790	0.605	0.473	0.401	0.001
Prev	38.514	41.892	10.135	43.243	60.135	92.568	78.378	69.595	60.135	0.699

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.122	0.035	0.068	0.040	0.034	0.064	0.253	0.227	0.051	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.003	0.003	0.001	0.000
90^thp	0.098	0.102	0.084	0.097	0.093	0.177	0.581	0.546	0.165	0.000
Stdev	0.787	0.056	0.258	0.092	0.057	0.104	0.472	0.479	0.063	0.000
Prev	52.703	55.882	62.791	77.143	57.143	80.000	90.909	90.323	90.000	0.000