Subspecies: subsp._vincentii
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BMU - Buccal Mucosa
AKE - Keratinized Gingiva
HPA - Hard Palate
TDO - Tongue Dorsum
PTO - Palatine Tonsils
THR - Throat
SAL - Saliva
SUPP - Supra-gingival Plaque
SUBP - Sub-gingival Plaque
ANA - Nasal
STO - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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Notes:
reads equally close to F. nucleatum subsp. polymorphum and F. nucleatum subsp. vincentii were assigned half to each taxon
reads equally close to F. nucleatum subsp. polymorphum, F. nucleatum subsp. vincentii, and F. polymorphum were assigned one third to each taxon
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
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| Avg | 3.421 | 1.111 | 0.306 | 0.237 | 0.050 | 0.331 | 0.458 | 1.650 | 0.037 | 0.000 |
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| 10thp | 0.125 | 0.032 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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| 90thp | 9.096 | 4.030 | 0.723 | 0.647 | 0.128 | 0.674 | 0.420 | 3.908 | 0.087 | 0.000 |
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| Stdev | 6.906 | 1.575 | 1.121 | 0.367 | 0.061 | 0.590 | 2.347 | 4.563 | 0.076 | 0.000 |
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| Prev | 97.403 | 97.403 | 75.325 | 85.714 | 76.623 | 81.818 | 68.831 | 88.312 | 53.247 | 0.000 |
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Notes:
Reads equally close to F. nucleatum subsp. naviforme and F. nucleatum subsp. vincentii were assigned half to each taxon.
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
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| Avg | 3.444 | 0.951 | 0.068 | 0.171 | 0.068 | 0.421 | 0.527 | 2.040 | 0.048 | 0.000 |
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| 10thp | 0.057 | 0.012 | 0.000 | 0.000 | 0.000 | 0.013 | 0.000 | 0.000 | 0.000 | 0.000 |
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| 90thp | 8.940 | 2.975 | 0.095 | 0.319 | 0.174 | 1.160 | 0.583 | 5.636 | 0.144 | 0.000 |
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| Stdev | 4.181 | 1.349 | 0.398 | 0.489 | 0.120 | 0.566 | 2.451 | 5.147 | 0.095 | 0.000 |
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| Prev | 97.973 | 91.892 | 43.919 | 78.378 | 67.568 | 91.216 | 77.703 | 82.432 | 59.459 | 0.000 |
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From: Dewhirst 35x9 data (not published yet)
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Notes:
Reads equally close to HMT 200 and 689 were assigned half to each taxon.
Reads equally close to HMT 200 and 420 were assigned half to each taxon.
Reads equally close to HMT 200 and 202 were assigned half to each taxon.
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | ANA |
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| Avg | 5.304 | 1.763 | 0.402 | 0.426 | 0.187 | 0.061 | 0.204 | 1.923 | 0.015 | 0.000 |
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| 10thp | 0.011 | 0.012 | 0.000 | 0.002 | 0.003 | 0.004 | 0.003 | 0.003 | 0.000 | 0.000 |
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| 90thp | 14.579 | 5.011 | 0.736 | 1.138 | 0.422 | 0.147 | 0.631 | 4.916 | 0.034 | 0.000 |
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| Stdev | 8.788 | 2.166 | 1.228 | 0.913 | 0.380 | 0.075 | 0.501 | 4.404 | 0.023 | 0.000 |
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| Prev | 98.649 | 97.059 | 79.070 | 91.429 | 92.857 | 94.000 | 96.970 | 90.323 | 75.000 | 0.000 |
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