Genome Explorer: Treponema pallidum Nichols (SEQF1062.1)
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NCBI Annotation for SEQF1062.1
| Genome selected: Treponema pallidum Nichols | |||
| Contigs: | 1 | Bases: | 1138011 bps |
| CDS: | 1031 | rRNA: | 6 |
| tmRNA: | 0 | tRNA: | 45 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1001 | AE000520.1 | AAC65954.1 | open | 1914 [NA] | 637 [AA] | 1095009-1096922 | TP_1006 | DNA gyrase, subunit B (gyrB) |
| 1002 | AE000520.1 | AAC65955.1 | open | 918 [NA] | 305 [AA] | 1097031-1097948 | TP_1007 | thymidylate synthase-complementing protein (thy1) |
| 1003 | AE000520.1 | AAC65956.1 | open | 2538 [NA] | 845 [AA] | 1097991-1100528 | TP_1008 | ribonucleoside-diphosphate reductase, subunit alpha (nrdA) |
| 1004 | AE000520.1 | AAC65957.1 | open | 672 [NA] | 223 [AA] | 1088624-1089295 | TP_1000 | predicted coding region TP1000 |
| 1005 | AE000520.1 | AAC65958.1 | open | 1182 [NA] | 393 [AA] | 1089435-1090616 | TP_1001 | predicted coding region TP1001 |
| 1006 | AE000520.1 | AAC65959.1 | open | 1038 [NA] | 345 [AA] | 1091493-1092530 | TP_1003 | predicted coding region TP1003 |
| 1007 | AE000520.1 | AAC65960.1 | open | 1071 [NA] | 356 [AA] | 1100655-1101725 | TP_1009 | glycerol-3-phosphate dehydrogenase (gpsA) |
| 1008 | AE000520.1 | AAC65961.1 | open | 450 [NA] | 149 [AA] | 1101822-1102271 | TP_1010 | nucleoside-diphosphate kinase (ndk) |
| 1009 | AE000520.1 | AAC65962.1 | open | 609 [NA] | 202 [AA] | 1102397-1103005 | TP_1011 | peptidyl-tRNA hydrolase (pth) |
| 1010 | AE000520.1 | AAC65963.1 | open | 936 [NA] | 311 [AA] | 1103040-1103975 | TP_1012 | RNA polymerase sigma-43 factor (sigA) |
| 1011 | AE000520.1 | AAC65964.1 | open | 267 [NA] | 88 [AA] | 1104180-1104446 | TP_1013 | chaperonin (groES) |
| 1012 | AE000520.1 | AAC65965.1 | open | 426 [NA] | 141 [AA] | 1106357-1106782 | TP_1015 | N utilization substance protein B (nusB) |
| 1013 | AE000520.1 | AAC65966.1 | open | 1086 [NA] | 361 [AA] | 1106779-1107864 | TP_1016 | basic membrane protein (tpn39b) |
| 1014 | AE000520.1 | AAC65967.1 | open | 1515 [NA] | 504 [AA] | 1109926-1111440 | TP_1018 | conserved hypothetical protein |
| 1015 | AE000520.1 | AAC65968.1 | open | 1818 [NA] | 605 [AA] | 1107937-1109754 | TP_1017 | alanyl-tRNA synthetase (alaS) |
| 1016 | AE000520.1 | AAC65969.1 | open | 444 [NA] | 147 [AA] | 1111462-1111905 | TP_1019 | glu-tRNA amidotransferase, subunit C (gatC) |
| 1017 | AE000520.1 | AAC65970.1 | open | 1521 [NA] | 506 [AA] | 1111906-1113426 | TP_1020 | glu-tRNA amidotransferase, subunit A (gatA) |
| 1018 | AE000520.1 | AAC65971.1 | open | 1530 [NA] | 509 [AA] | 1113419-1114948 | TP_1021 | glu-tRNA amidotransferase, subunit B (gatB) |
| 1019 | AE000520.1 | AAC65972.1 | open | 1935 [NA] | 644 [AA] | 1104457-1106391 | TP_1014 | predicted coding region TP1014 |
| 1020 | AE000520.1 | AAC65973.1 | open | 1368 [NA] | 455 [AA] | 1115044-1116411 | TP_1022 | DNA repair protein (sms) |
| 1021 | AE000520.1 | AAC65974.1 | open | 495 [NA] | 164 [AA] | 1116458-1116952 | TP_1023 | recX protein (recX) |
| 1022 | AE000520.1 | AAC65975.1 | open | 429 [NA] | 142 [AA] | 1117485-1117913 | TP_1025 | ribosomal protein L13 (rplM) |
| 1023 | AE000520.1 | AAC65976.1 | open | 1770 [NA] | 589 [AA] | 1118346-1120115 | TP_1026 | oligoendopeptidase F, putative |
| 1024 | AE000520.1 | AAC65977.1 | open | 777 [NA] | 258 [AA] | 1120237-1121013 | TP_1027 | uridine phosphorylase (udp) |
| 1025 | AE000520.1 | AAC65978.1 | open | 2013 [NA] | 670 [AA] | 1121029-1123041 | TP_1028 | DNA helicase II (uvrD) |
| 1026 | AE000520.1 | AAC65979.1 | open | 1545 [NA] | 514 [AA] | 1124354-1125898 | TP_1031 | tpr protein L (tprL) |
| 1027 | AE000520.1 | AAC65980.1 | open | 936 [NA] | 311 [AA] | 1126412-1127347 | TP_1033 | conserved hypothetical protein |
| 1028 | AE000520.1 | AAC65981.1 | open | 390 [NA] | 129 [AA] | 1117080-1117469 | TP_1024 | ribosomal protein S9 (rpsI) |
| 1029 | AE000520.1 | AAC65982.1 | open | 687 [NA] | 228 [AA] | 1123124-1123810 | TP_1029 | predicted coding region TP1029 |
| 1030 | AE000520.1 | AAC65983.1 | open | 498 [NA] | 165 [AA] | 1123829-1124326 | TP_1030 | predicted coding region TP1030 |
| 1031 | AE000520.1 | AAC65984.1 | open | 435 [NA] | 144 [AA] | 1125966-1126400 | TP_1032 | predicted coding region TP1032 |