Genome Explorer: Lactobacillus plantarum IPLA88 (SEQF2525.1)
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NCBI Annotation for SEQF2525.1
| Genome selected: Lactobacillus plantarum IPLA88 | |||
| Contigs: | 208 | Bases: | 3254055 bps |
| CDS: | 3116 | rRNA: | 2 |
| tmRNA: | 0 | tRNA: | 47 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3001 | ASJE01000181.1 | EPD22960.1 | open | 198 [NA] | 65 [AA] | 28978-29175 | L103_15439 | Hypothetical protein |
| 3002 | ASJE01000181.1 | EPD22961.1 | open | 528 [NA] | 175 [AA] | 29271-29798 | L103_15444 | methyltransferase, SAM-dependent |
| 3003 | ASJE01000181.1 | EPD22962.1 | open | 651 [NA] | 216 [AA] | 29867-30517 | L103_15449 | phosphatase |
| 3004 | ASJE01000181.1 | EPD22963.1 | open | 2427 [NA] | 808 [AA] | 31013-33439 | L103_15454 | leucyl-tRNA ligase |
| 3005 | ASJE01000181.1 | EPD22964.1 | open | 1671 [NA] | 556 [AA] | 33963-35633 | L103_15459 | polysaccharide export protein |
| 3006 | ASJE01000181.1 | EPD22965.1 | open | 741 [NA] | 246 [AA] | 35641-36381 | L103_15464 | Pseudouridine synthase |
| 3007 | ASJE01000181.1 | EPD22966.1 | open | 837 [NA] | 278 [AA] | 36518-37354 | L103_15469 | ADP-dependent (S)-NAD(P)H-hydrate dehydratase |
| 3008 | ASJE01000181.1 | EPD22967.1 | open | 1404 [NA] | 467 [AA] | 37481-38884 | L103_15474 | dipeptidase PepV |
| 3009 | ASJE01000181.1 | EPD22968.1 | open | 507 [NA] | 168 [AA] | 38911-39417 | L103_15479 | Nucleotide-binding protein, universal stress protein UspA family |
| 3010 | ASJE01000181.1 | EPD22969.1 | open | 1101 [NA] | 366 [AA] | 39759-40859 | L103_15484 | glycerol-3-phosphate ABC transporter ATP-binding protein |
| 3011 | ASJE01000181.1 | EPD22970.1 | open | 966 [NA] | 321 [AA] | 40834-41799 | L103_15489 | Glycerol-3-phosphate ABC transporter, permease protein |
| 3012 | ASJE01000181.1 | EPD22971.1 | open | 843 [NA] | 280 [AA] | 41799-42641 | L103_15494 | Glycerol-3-phosphate ABC transporter, permease protein |
| 3013 | ASJE01000181.1 | EPD22972.1 | open | 1353 [NA] | 450 [AA] | 42638-43990 | L103_15499 | glycerol-3-phosphate ABC transporter, substrate binding protein |
| 3014 | ASJE01000181.1 | EPD22973.1 | open | 687 [NA] | 228 [AA] | 44011-44697 | L103_15504 | glycerophosphodiester phosphodiesterase |
| 3015 | ASJE01000181.1 | EPD22974.1 | open | 648 [NA] | 215 [AA] | 44879-45526 | L103_15509 | deoxyguanosine kinase |
| 3016 | ASJE01000181.1 | EPD22975.1 | open | 381 [NA] | 126 [AA] | 45631-46011 | L103_15514 | large-conductance mechanosensitive channel |
| 3017 | ASJE01000181.1 | EPD22976.1 | open | 2952 [NA] | 983 [AA] | 46515-49466 | L103_15519 | integral membrane protein |
| 3018 | ASJE01000181.1 | EPD22977.1 | open | 168 [NA] | 55 [AA] | 49865-50032 | L103_15524 | hypothetical protein |
| 3019 | ASJE01000181.1 | EPD22978.1 | open | 738 [NA] | 245 [AA] | 50053-50790 | L103_15529 | ABC transporter, permease protein |
| 3020 | ASJE01000181.1 | EPD22979.1 | open | 858 [NA] | 285 [AA] | 50787-51644 | L103_15534 | ABC superfamily ATP binding cassette transporter, ABC protein |
| 3021 | ASJE01000181.1 | EPD22980.1 | open | 987 [NA] | 328 [AA] | 51795-52781 | L103_15539 | bifunctional protein: ABC transporter ATP-binding protein, transcription regulator, LytR family |
| 3022 | ASJE01000182.1 | EPD22931.1 | open | 426 [NA] | 141 [AA] | 771-1196 | L103_15550 | lipoprotein precursor |
| 3023 | ASJE01000182.1 | EPD22932.1 | open | 120 [NA] | 39 [AA] | 1209-1328 | L103_15555 | Hypothetical protein |
| 3024 | ASJE01000182.1 | EPD22933.1 | open | 1014 [NA] | 337 [AA] | 1361-2374 | L103_15560 | Extracellular protein, membrane-anchored |
| 3025 | ASJE01000182.1 | EPD22934.1 | open | 522 [NA] | 173 [AA] | 2480-3001 | L103_15565 | Teichoic acid glycosylation protein |
| 3026 | ASJE01000182.1 | EPD22935.1 | open | 360 [NA] | 119 [AA] | 3101-3460 | L103_15570 | hypothetical protein |
| 3027 | ASJE01000182.1 | EPD22936.1 | open | 1857 [NA] | 618 [AA] | 3533-5389 | L103_15575 | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein |
| 3028 | ASJE01000182.1 | EPD22937.1 | open | 2307 [NA] | 768 [AA] | 5403-7709 | L103_15580 | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
| 3029 | ASJE01000182.1 | EPD22938.1 | open | 1638 [NA] | 545 [AA] | 8598-10235 | L103_15585 | Hypothetical protein |
| 3030 | ASJE01000182.1 | EPD22939.1 | open | 1176 [NA] | 391 [AA] | 10213-11388 | L103_15590 | sulfate adenylyltransferase |
| 3031 | ASJE01000182.1 | EPD22940.1 | open | 624 [NA] | 207 [AA] | 11391-12014 | L103_15595 | adenylylsulfate kinase |
| 3032 | ASJE01000182.1 | EPD22941.1 | open | 957 [NA] | 318 [AA] | 12004-12960 | L103_15600 | exopolyphosphatase |
| 3033 | ASJE01000182.1 | EPD22942.1 | open | 1740 [NA] | 579 [AA] | 13181-14920 | L103_15605 | arylsulfate sulfotransferase |
| 3034 | ASJE01000184.1 | EPD22930.1 | open | 279 [NA] | 93 [AA] | <1->280 | L103_15612 | relaxase/mobilization nuclease domain-containing protein |
| 3035 | ASJE01000185.1 | EPD22929.1 | open | 228 [NA] | 75 [AA] | 161-388 | L103_15617 | hypothetical protein |
| 3036 | ASJE01000188.1 | EPD22928.1 | open | 531 [NA] | 177 [AA] | <1->532 | L103_15632 | cell surface protein precursor |
| 3037 | ASJE01000192.1 | EPD22926.1 | open | 1173 [NA] | 390 [AA] | 35-1207 | L103_15639 | ser/thr protein phosphatase |
| 3038 | ASJE01000192.1 | EPD22927.1 | open | 159 [NA] | 52 [AA] | 1395-1553 | L103_15644 | transposase |
| 3039 | ASJE01000193.1 | EPD22925.1 | open | 270 [NA] | 90 [AA] | <1->271 | L103_15649 | plasmid replication initiator protein A |
| 3040 | ASJE01000194.1 | EPD22914.1 | open | 447 [NA] | 148 [AA] | 84-530 | L103_15654 | hypothetical protein |
| 3041 | ASJE01000194.1 | EPD22915.1 | open | 1527 [NA] | 508 [AA] | 768-2294 | L103_15659 | glycine betaine/carnitine/choline ABC transporter, substrate binding and permease |
| 3042 | ASJE01000194.1 | EPD22916.1 | open | 972 [NA] | 323 [AA] | 2295-3266 | L103_15664 | Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein |
| 3043 | ASJE01000194.1 | EPD22917.1 | open | 1332 [NA] | 443 [AA] | 3344-4675 | L103_15669 | glutathione reductase |
| 3044 | ASJE01000194.1 | EPD22918.1 | open | 1518 [NA] | 505 [AA] | 5141-6658 | L103_15674 | glycerol kinase |
| 3045 | ASJE01000194.1 | EPD22919.1 | open | 1830 [NA] | 609 [AA] | 6673-8502 | L103_15679 | Glycerol-3-phosphate dehydrogenase,FAD-dependent |
| 3046 | ASJE01000194.1 | EPD22920.1 | open | 723 [NA] | 240 [AA] | 8517-9239 | L103_15684 | Glycerol uptake facilitator protein |
| 3047 | ASJE01000194.1 | EPD22921.1 | open | 2349 [NA] | 782 [AA] | 9434-11782 | L103_15689 | cell surface protein precursor |
| 3048 | ASJE01000194.1 | EPD22922.1 | open | 1749 [NA] | 582 [AA] | 11784-13532 | L103_15694 | hypothetical protein |
| 3049 | ASJE01000194.1 | EPD22923.1 | open | 234 [NA] | 77 [AA] | 13538-13771 | L103_15699 | hypothetical protein |
| 3050 | ASJE01000194.1 | EPD22924.1 | open | 918 [NA] | 305 [AA] | 14392-15309 | L103_15704 | hypothetical protein |
| 3051 | ASJE01000196.1 | EPD22913.1 | open | 188 [NA] | 62 [AA] | <1-188 | L103_15709 | hypothetical protein |
| 3052 | ASJE01000197.1 | EPD22912.1 | open | 339 [NA] | 112 [AA] | 74-412 | L103_15714 | hypothetical protein |
| 3053 | ASJE01000198.1 | EPD22911.1 | open | 208 [NA] | 69 [AA] | <1->209 | L103_15719 | hypothetical protein |
| 3054 | ASJE01000199.1 | EPD22909.1 | open | 117 [NA] | 38 [AA] | 4-120 | L103_15724 | Hypothetical protein |
| 3055 | ASJE01000199.1 | EPD22910.1 | open | 201 [NA] | 66 [AA] | 193->395 | L103_15729 | hypothetical protein |
| 3056 | ASJE01000201.1 | EPD22874.1 | open | 933 [NA] | 311 [AA] | <1-933 | L103_15734 | cell surface protein precursor |
| 3057 | ASJE01000201.1 | EPD22875.1 | open | 762 [NA] | 253 [AA] | 1206-1967 | L103_15739 | cell surface hydrolase |
| 3058 | ASJE01000201.1 | EPD22876.1 | open | 996 [NA] | 331 [AA] | 2091-3086 | L103_15744 | ferredoxin--NADP reductase |
| 3059 | ASJE01000201.1 | EPD22877.1 | open | 264 [NA] | 87 [AA] | 3477-3740 | L103_15749 | hypothetical protein |
| 3060 | ASJE01000201.1 | EPD22878.1 | open | 1794 [NA] | 597 [AA] | 4200-5993 | L103_15754 | Glycerophosphodiester phosphodiesterase |
| 3061 | ASJE01000201.1 | EPD22879.1 | open | 2154 [NA] | 717 [AA] | 6376-8529 | L103_15759 | Sulfatase, alkaline phosphatase superfamily,membrane-bound protein |
| 3062 | ASJE01000201.1 | EPD22880.1 | open | 426 [NA] | 141 [AA] | 8732-9157 | L103_15764 | GNAT family acetyltransferase |
| 3063 | ASJE01000201.1 | EPD22881.1 | open | 2010 [NA] | 669 [AA] | 9519-11528 | L103_15769 | cell surface protein |
| 3064 | ASJE01000201.1 | EPD22882.1 | open | 96 [NA] | 31 [AA] | 11735-11830 | L103_15774 | Hypothetical protein |
| 3065 | ASJE01000201.1 | EPD22883.1 | open | 2685 [NA] | 894 [AA] | 11991-14675 | L103_15779 | integral membrane protein |
| 3066 | ASJE01000201.1 | EPD22884.1 | open | 630 [NA] | 209 [AA] | 14828-15457 | L103_15784 | integral membrane protein |
| 3067 | ASJE01000201.1 | EPD22885.1 | open | 219 [NA] | 72 [AA] | 15457-15675 | L103_15789 | Hypothetical protein |
| 3068 | ASJE01000201.1 | EPD22886.1 | open | 954 [NA] | 317 [AA] | 15724-16677 | L103_15794 | choloylglycine hydrolase |
| 3069 | ASJE01000201.1 | EPD22887.1 | open | 1062 [NA] | 353 [AA] | 16908-17969 | L103_15799 | aspartate-semialdehyde dehydrogenase |
| 3070 | ASJE01000201.1 | EPD22888.1 | open | 516 [NA] | 171 [AA] | 18287-18802 | L103_15804 | Hypothetical protein |
| 3071 | ASJE01000201.1 | EPD22889.1 | open | 831 [NA] | 276 [AA] | 18841-19671 | L103_15809 | Short-chain dehydrogenase/oxidoreductase |
| 3072 | ASJE01000201.1 | EPD22890.1 | open | 510 [NA] | 169 [AA] | 19720-20229 | L103_15814 | Transcription regulator, MerR family protein |
| 3073 | ASJE01000201.1 | EPD22891.1 | open | 348 [NA] | 115 [AA] | 20380-20727 | L103_15819 | Hypothetical protein |
| 3074 | ASJE01000201.1 | EPD22892.1 | open | 909 [NA] | 302 [AA] | 20742-21650 | L103_15824 | Mg2+/Co2+ transport protein |
| 3075 | ASJE01000201.1 | EPD22893.1 | open | 1164 [NA] | 387 [AA] | 21734-22897 | L103_15829 | membrane protein |
| 3076 | ASJE01000201.1 | EPD22894.1 | open | 831 [NA] | 276 [AA] | 23124-23954 | L103_15834 | histidinol-phosphatase |
| 3077 | ASJE01000201.1 | EPD22895.1 | open | 1152 [NA] | 383 [AA] | 24420-25571 | L103_15839 | histidine-tRNA synthetase |
| 3078 | ASJE01000201.1 | EPD22896.1 | open | 657 [NA] | 218 [AA] | 25564-26220 | L103_15844 | ATP phosphoribosyltransferase |
| 3079 | ASJE01000201.1 | EPD22897.1 | open | 1287 [NA] | 428 [AA] | 26220-27506 | L103_15849 | bifunctional histidinal dehydrogenase/ histidinol dehydrogenase |
| 3080 | ASJE01000201.1 | EPD22898.1 | open | 585 [NA] | 194 [AA] | 27579-28163 | L103_15854 | imidazoleglycerol-phosphate dehydratase |
| 3081 | ASJE01000201.1 | EPD22899.1 | open | 627 [NA] | 208 [AA] | 28164-28790 | L103_15859 | imidazole glycerol phosphate synthase subunit HisH |
| 3082 | ASJE01000201.1 | EPD22900.1 | open | 720 [NA] | 239 [AA] | 28771-29490 | L103_15864 | phosphoribosylformimino-5-aminoimidazole carboxamideribotide isomerase |
| 3083 | ASJE01000201.1 | EPD22901.1 | open | 759 [NA] | 252 [AA] | 29484-30242 | L103_15869 | imidazole glycerol phosphate synthase subunit HisF |
| 3084 | ASJE01000201.1 | EPD22902.1 | open | 327 [NA] | 108 [AA] | 30239-30565 | L103_15874 | Phosphoribosyl-AMP cyclohydrolase |
| 3085 | ASJE01000201.1 | EPD22903.1 | open | 321 [NA] | 106 [AA] | 30706-31026 | L103_15879 | phosphoribosyl-ATP pyrophosphatase |
| 3086 | ASJE01000201.1 | EPD22904.1 | open | 1071 [NA] | 356 [AA] | 31038-32108 | L103_15884 | histidinol-phosphate aminotransferase |
| 3087 | ASJE01000201.1 | EPD22905.1 | open | 555 [NA] | 184 [AA] | 32294-32848 | L103_15889 | O-acetyltransferase |
| 3088 | ASJE01000201.1 | EPD22906.1 | open | 774 [NA] | 257 [AA] | 33024-33797 | L103_15894 | membrane protein |
| 3089 | ASJE01000201.1 | EPD22907.1 | open | 861 [NA] | 286 [AA] | 33794-34654 | L103_15899 | 3-hydroxyisobutyrate dehydrogenase |
| 3090 | ASJE01000201.1 | EPD22908.1 | open | 138 [NA] | 45 [AA] | 35291-35428 | L103_15904 | Hypothetical protein |
| 3091 | ASJE01000202.1 | EPD22861.1 | open | 2001 [NA] | 666 [AA] | 330-2330 | L103_15909 | ABC transporter, ATP-binding and permease protein |
| 3092 | ASJE01000202.1 | EPD22862.1 | open | 3339 [NA] | 1112 [AA] | 2706-6044 | L103_15914 | cell surface protein precursor |
| 3093 | ASJE01000202.1 | EPD22863.1 | open | 363 [NA] | 120 [AA] | 6257-6619 | L103_15919 | hypothetical protein |
| 3094 | ASJE01000202.1 | EPD22864.1 | open | 837 [NA] | 278 [AA] | 6684-7520 | L103_15924 | Metallo-phosphoesterase |
| 3095 | ASJE01000202.1 | EPD22865.1 | open | 315 [NA] | 104 [AA] | 7708-8022 | L103_15929 | hypothetical protein |
| 3096 | ASJE01000202.1 | EPD22866.1 | open | 822 [NA] | 273 [AA] | 8153-8974 | L103_15934 | Transcription regulator, TetR family protein |
| 3097 | ASJE01000202.1 | EPD22867.1 | open | 447 [NA] | 148 [AA] | 9177-9623 | L103_15939 | PTS system, cellobiose-specific EIIA component |
| 3098 | ASJE01000202.1 | EPD22868.1 | open | 327 [NA] | 108 [AA] | 10076-10402 | L103_15944 | PTS system, cellobiose-specific EIIB component |
| 3099 | ASJE01000202.1 | EPD22869.1 | open | 1473 [NA] | 490 [AA] | 10426-11898 | L103_15949 | PTS system, cellobiose-specific EIIC component |
| 3100 | ASJE01000202.1 | EPD22870.1 | open | 1383 [NA] | 460 [AA] | 11898-13280 | L103_15954 | 6-phospho-beta-glucosidase |
| 3101 | ASJE01000202.1 | EPD22871.1 | open | 1020 [NA] | 339 [AA] | 13477-14496 | L103_15959 | NAD-dependent epimerase/dehydratase protein family |
| 3102 | ASJE01000202.1 | EPD22872.1 | open | 444 [NA] | 147 [AA] | 14602-15045 | L103_15964 | Transcription regulator, MerR family protein |
| 3103 | ASJE01000202.1 | EPD22873.1 | open | 615 [NA] | 204 [AA] | 15429-16043 | L103_15969 | extracellular transglycosylase, with LysM peptidoglycan binding domain |
| 3104 | ASJE01000204.1 | EPD22859.1 | open | 1839 [NA] | 612 [AA] | 214-2052 | L103_15978 | cadmium-/zinc-/cobalt-transporting ATPase |
| 3105 | ASJE01000204.1 | EPD22860.1 | open | 213 [NA] | 70 [AA] | 2096-2308 | L103_15983 | tyrosine recombinase |
| 3106 | ASJE01000207.1 | EPD22858.1 | open | 245 [NA] | 81 [AA] | <1->247 | L103_15988 | relaxase/mobilization nuclease domain-containing protein |
| 3107 | ASJE01000208.1 | EPD22848.1 | open | 1905 [NA] | 634 [AA] | 376-2280 | L103_15993 | Cadmium transporting P-type ATPase |
| 3108 | ASJE01000208.1 | EPD22849.1 | open | 753 [NA] | 250 [AA] | 2434-3186 | L103_15998 | glycerol uptake facilitator protein |
| 3109 | ASJE01000208.1 | EPD22850.1 | open | 321 [NA] | 106 [AA] | 3571-3891 | L103_16003 | Thioredoxin |
| 3110 | ASJE01000208.1 | EPD22851.1 | open | 270 [NA] | 89 [AA] | 3915-4184 | L103_16008 | Hypothetical protein |
| 3111 | ASJE01000208.1 | EPD22852.1 | open | 204 [NA] | 67 [AA] | 4284-4487 | L103_16013 | Hypothetical protein |
| 3112 | ASJE01000208.1 | EPD22853.1 | open | 555 [NA] | 184 [AA] | 4615-5169 | L103_16018 | DNA-binding ferritin-like protein, DPS family |
| 3113 | ASJE01000208.1 | EPD22854.1 | open | 219 [NA] | 72 [AA] | 5182-5400 | L103_16023 | heavy metal binding protein |
| 3114 | ASJE01000208.1 | EPD22855.1 | open | 666 [NA] | 221 [AA] | 5604-6269 | L103_16028 | Transcription regulator, Crp family protein |
| 3115 | ASJE01000208.1 | EPD22856.1 | open | 1917 [NA] | 638 [AA] | 6578-8494 | L103_16033 | Endopeptidase PepO |
| 3116 | ASJE01000208.1 | EPD22857.1 | open | 225 [NA] | 74 [AA] | 8650-8874 | L103_16038 | hypothetical protein |