Genome Explorer: Prevotella bivia DNF00320 (SEQF2729.1)
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NCBI Annotation for SEQF2729.1
| Genome selected: Prevotella bivia DNF00320 | |||
| Contigs: | 179 | Bases: | 2584224 bps |
| CDS: | 2132 | rRNA: | 3 |
| tmRNA: | 0 | tRNA: | 39 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | JRNQ01000111.1 | KGF42590.1 | open | 387 [NA] | 128 [AA] | 608-994 | HMPREF0647_10950 | XRE family transcriptional regulator |
| 2002 | JRNQ01000111.1 | KGF42591.1 | open | 2352 [NA] | 783 [AA] | 1007-3358 | HMPREF0647_10955 | mobilization protein |
| 2003 | JRNQ01000111.1 | KGF42592.1 | open | 657 [NA] | 218 [AA] | 3380-4036 | HMPREF0647_10960 | hypothetical protein |
| 2004 | JRNQ01000111.1 | KGF42593.1 | open | 501 [NA] | 166 [AA] | 4052-4552 | HMPREF0647_10965 | hypothetical protein |
| 2005 | JRNQ01000111.1 | KGF42594.1 | open | 930 [NA] | 309 [AA] | 4564-5493 | HMPREF0647_10970 | conjugal transfer protein TraN |
| 2006 | JRNQ01000111.1 | KGF42595.1 | open | 1218 [NA] | 405 [AA] | 5533-6750 | HMPREF0647_10975 | conjugal transfer protein TraM |
| 2007 | JRNQ01000111.1 | KGF42596.1 | open | 504 [NA] | 167 [AA] | 6738-7241 | HMPREF0647_10980 | hypothetical protein |
| 2008 | JRNQ01000112.1 | KGF42530.1 | open | 1500 [NA] | 499 [AA] | 152-1651 | HMPREF0647_10985 | helicase |
| 2009 | JRNQ01000112.1 | KGF42531.1 | open | 627 [NA] | 208 [AA] | 1705-2331 | HMPREF0647_10990 | serine/threonine protein phosphatase |
| 2010 | JRNQ01000112.1 | KGF42532.1 | open | 840 [NA] | 279 [AA] | 2328-3167 | HMPREF0647_10995 | nucleotidyltransferase |
| 2011 | JRNQ01000112.1 | KGF42533.1 | open | 1005 [NA] | 334 [AA] | 3145-4149 | HMPREF0647_11000 | hypothetical protein |
| 2012 | JRNQ01000113.1 | KGF42527.1 | open | 519 [NA] | 172 [AA] | 63->582 | HMPREF0647_11005 | topoisomerase |
| 2013 | JRNQ01000114.1 | KGF42460.1 | open | 818 [NA] | 273 [AA] | <1->818 | HMPREF0647_11010 | topoisomerase |
| 2014 | JRNQ01000115.1 | KGF42331.1 | open | 681 [NA] | 226 [AA] | 308-988 | HMPREF0647_11020 | hypothetical protein |
| 2015 | JRNQ01000115.1 | KGF42332.1 | open | 672 [NA] | 223 [AA] | 996-1667 | HMPREF0647_11025 | hypothetical protein |
| 2016 | JRNQ01000115.1 | KGF42333.1 | open | 705 [NA] | 234 [AA] | 1799-2503 | HMPREF0647_11030 | heat-shock protein |
| 2017 | JRNQ01000115.1 | KGF42334.1 | open | 1167 [NA] | 388 [AA] | 2559-3725 | HMPREF0647_11035 | carboxynorspermidine decarboxylase |
| 2018 | JRNQ01000115.1 | KGF42335.1 | open | 333 [NA] | 110 [AA] | 3860-4192 | HMPREF0647_11040 | hypothetical protein |
| 2019 | JRNQ01000115.1 | KGF42336.1 | open | 939 [NA] | 312 [AA] | 4189-5127 | HMPREF0647_11045 | ribose-phosphate pyrophosphokinase |
| 2020 | JRNQ01000116.1 | KGF42279.1 | open | 2919 [NA] | 972 [AA] | 143-3061 | HMPREF0647_11050 | ligand-gated channel protein |
| 2021 | JRNQ01000116.1 | KGF42280.1 | open | 1530 [NA] | 509 [AA] | 3124-4653 | HMPREF0647_11055 | hypothetical protein |
| 2022 | JRNQ01000117.1 | KGF42277.1 | open | 501 [NA] | 166 [AA] | 1660-2160 | HMPREF0647_11070 | arginine repressor |
| 2023 | JRNQ01000117.1 | KGF42278.1 | open | 2151 [NA] | 716 [AA] | 2624-4774 | HMPREF0647_11075 | dipeptidyl carboxypeptidase II |
| 2024 | JRNQ01000118.1 | KGF42177.1 | open | 1713 [NA] | 570 [AA] | 603-2315 | HMPREF0647_11090 | hypothetical protein |
| 2025 | JRNQ01000118.1 | KGF42178.1 | open | 1005 [NA] | 334 [AA] | 2602-3606 | HMPREF0647_11095 | hypothetical protein |
| 2026 | JRNQ01000118.1 | KGF42179.1 | open | 366 [NA] | 121 [AA] | 3634-3999 | HMPREF0647_11100 | hypothetical protein |
| 2027 | JRNQ01000118.1 | KGF42180.1 | open | 438 [NA] | 145 [AA] | 4071-4508 | HMPREF0647_11105 | hypothetical protein |
| 2028 | JRNQ01000118.1 | KGF42181.1 | open | 204 [NA] | 67 [AA] | 4520-4723 | HMPREF0647_11110 | DNA-binding protein |
| 2029 | JRNQ01000119.1 | KGF42161.1 | open | 586 [NA] | 195 [AA] | <1-586 | HMPREF0647_11115 | DNA topoisomerase I |
| 2030 | JRNQ01000119.1 | KGF42162.1 | open | 1410 [NA] | 469 [AA] | 608-2017 | HMPREF0647_11120 | hypothetical protein |
| 2031 | JRNQ01000119.1 | KGF42163.1 | open | 294 [NA] | 97 [AA] | 2653-2946 | HMPREF0647_11135 | hypothetical protein |
| 2032 | JRNQ01000119.1 | KGF42164.1 | open | 1308 [NA] | 435 [AA] | 3230-4537 | HMPREF0647_11140 | transposase |
| 2033 | JRNQ01000120.1 | KGF42011.1 | open | 258 [NA] | 85 [AA] | <1-259 | HMPREF0647_11145 | 3-oxoacyl-ACP synthase |
| 2034 | JRNQ01000120.1 | KGF42012.1 | open | 219 [NA] | 72 [AA] | 497-715 | HMPREF0647_11150 | hypothetical protein |
| 2035 | JRNQ01000120.1 | KGF42013.1 | open | 1251 [NA] | 416 [AA] | 784-2034 | HMPREF0647_11155 | radical SAM protein |
| 2036 | JRNQ01000120.1 | KGF42014.1 | open | 2298 [NA] | 765 [AA] | 2031-4328 | HMPREF0647_11160 | hypothetical protein |
| 2037 | JRNQ01000120.1 | KGF42015.1 | open | 548 [NA] | 182 [AA] | 4359->4906 | HMPREF0647_11165 | ABC transporter ATP-binding protein |
| 2038 | JRNQ01000121.1 | KGF41867.1 | open | 2388 [NA] | 795 [AA] | 242-2629 | HMPREF0647_11175 | energy transducer TonB |
| 2039 | JRNQ01000121.1 | KGF41868.1 | open | 1242 [NA] | 413 [AA] | 2678-3919 | HMPREF0647_11180 | hypothetical protein |
| 2040 | JRNQ01000121.1 | KGF41869.1 | open | 645 [NA] | 214 [AA] | 4012-4656 | HMPREF0647_11185 | TetR family transcriptional regulator |
| 2041 | JRNQ01000122.1 | KGF41865.1 | open | 255 [NA] | 84 [AA] | <1-256 | HMPREF0647_11190 | 3-oxoacyl-ACP synthase |
| 2042 | JRNQ01000122.1 | KGF41866.1 | open | 1139 [NA] | 379 [AA] | 651->1789 | HMPREF0647_11195 | hypothetical protein |
| 2043 | JRNQ01000123.1 | KGF41861.1 | open | 429 [NA] | 142 [AA] | 6-434 | HMPREF0647_11200 | radical SAM protein |
| 2044 | JRNQ01000123.1 | KGF41862.1 | open | 2391 [NA] | 796 [AA] | 418-2808 | HMPREF0647_11205 | hypothetical protein |
| 2045 | JRNQ01000124.1 | KGF41794.1 | open | 1107 [NA] | 368 [AA] | 978-2084 | HMPREF0647_11220 | peptide methionine sulfoxide reductase |
| 2046 | JRNQ01000124.1 | KGF41795.1 | open | 936 [NA] | 311 [AA] | 2259-3194 | HMPREF0647_11225 | thioredoxin reductase |
| 2047 | JRNQ01000124.1 | KGF41796.1 | open | 522 [NA] | 173 [AA] | 3290-3811 | HMPREF0647_11230 | hypothetical protein |
| 2048 | JRNQ01000125.1 | KGF41683.1 | open | 1461 [NA] | 486 [AA] | 217-1677 | HMPREF0647_11235 | hypothetical protein |
| 2049 | JRNQ01000125.1 | KGF41684.1 | open | 957 [NA] | 318 [AA] | 2228-3184 | HMPREF0647_11240 | LuxR family transcriptional regulator |
| 2050 | JRNQ01000125.1 | KGF41685.1 | open | 603 [NA] | 200 [AA] | 3216-3818 | HMPREF0647_11245 | LuxR family transcriptional regulator |
| 2051 | JRNQ01000126.1 | KGF41607.1 | open | 1497 [NA] | 498 [AA] | 496-1992 | HMPREF0647_11250 | glycerol kinase |
| 2052 | JRNQ01000126.1 | KGF41608.1 | open | 747 [NA] | 248 [AA] | 2085-2831 | HMPREF0647_11255 | MIP (Major intrinsic protein) family permease |
| 2053 | JRNQ01000126.1 | KGF41609.1 | open | 768 [NA] | 255 [AA] | 2870-3637 | HMPREF0647_11260 | hypothetical protein |
| 2054 | JRNQ01000127.1 | KGF41606.1 | open | 414 [NA] | 137 [AA] | 1432->1846 | HMPREF0647_11270 | hypothetical protein |
| 2055 | JRNQ01000128.1 | KGF41605.1 | open | 435 [NA] | 144 [AA] | 160-594 | HMPREF0647_11275 | membrane protein |
| 2056 | JRNQ01000129.1 | KGF41469.1 | open | 405 [NA] | 134 [AA] | <1-407 | HMPREF0647_11285 | hypothetical protein |
| 2057 | JRNQ01000129.1 | KGF41470.1 | open | 324 [NA] | 107 [AA] | 419-742 | HMPREF0647_11290 | hypothetical protein |
| 2058 | JRNQ01000129.1 | KGF41471.1 | open | 357 [NA] | 118 [AA] | 745-1101 | HMPREF0647_11295 | hypothetical protein |
| 2059 | JRNQ01000129.1 | KGF41472.1 | open | 444 [NA] | 147 [AA] | 1124-1567 | HMPREF0647_11300 | hypothetical protein |
| 2060 | JRNQ01000129.1 | KGF41473.1 | open | 963 [NA] | 320 [AA] | 1955-2917 | HMPREF0647_11315 | transcriptional regulator |
| 2061 | JRNQ01000130.1 | KGF41436.1 | open | 987 [NA] | 328 [AA] | 1034-2020 | HMPREF0647_11335 | integrase |
| 2062 | JRNQ01000130.1 | KGF41437.1 | open | 891 [NA] | 296 [AA] | 2074-2964 | HMPREF0647_11340 | hypothetical protein |
| 2063 | JRNQ01000130.1 | KGF41438.1 | open | 306 [NA] | 101 [AA] | 3026-3331 | HMPREF0647_11345 | hypothetical protein |
| 2064 | JRNQ01000131.1 | KGF41377.1 | open | 2343 [NA] | 780 [AA] | 57-2399 | HMPREF0647_11350 | hypothetical protein |
| 2065 | JRNQ01000131.1 | KGF41378.1 | open | 960 [NA] | 320 [AA] | 2447->3406 | HMPREF0647_11355 | ABC transporter ATP-binding protein |
| 2066 | JRNQ01000132.1 | KGF41242.1 | open | 256 [NA] | 85 [AA] | <1-256 | HMPREF0647_11360 | hypothetical protein |
| 2067 | JRNQ01000132.1 | KGF41243.1 | open | 312 [NA] | 103 [AA] | 606-917 | HMPREF0647_11365 | excisionase |
| 2068 | JRNQ01000132.1 | KGF41244.1 | open | 408 [NA] | 135 [AA] | 1040-1447 | HMPREF0647_11370 | hypothetical protein |
| 2069 | JRNQ01000132.1 | KGF41245.1 | open | 468 [NA] | 155 [AA] | 1951-2418 | HMPREF0647_11375 | hypothetical protein |
| 2070 | JRNQ01000132.1 | KGF41246.1 | open | 789 [NA] | 262 [AA] | 2480->3270 | HMPREF0647_11380 | integrase |
| 2071 | JRNQ01000133.1 | KGF41225.1 | open | 333 [NA] | 110 [AA] | 366-698 | HMPREF0647_11390 | conjugal transfer protein TraF |
| 2072 | JRNQ01000134.1 | KGF41194.1 | open | 1668 [NA] | 555 [AA] | 116-1783 | HMPREF0647_11395 | DNA polymerase |
| 2073 | JRNQ01000135.1 | KGF41166.1 | open | 2820 [NA] | 939 [AA] | <1-2820 | HMPREF0647_11400 | hypothetical protein |
| 2074 | JRNQ01000136.1 | KGF41075.1 | open | 1812 [NA] | 603 [AA] | 1056-2867 | HMPREF0647_11415 | maturase |
| 2075 | JRNQ01000137.1 | KGF41050.1 | open | 510 [NA] | 169 [AA] | 196-705 | HMPREF0647_11425 | lysozyme |
| 2076 | JRNQ01000137.1 | KGF41051.1 | open | 519 [NA] | 172 [AA] | 813-1331 | HMPREF0647_11430 | hypothetical protein |
| 2077 | JRNQ01000137.1 | KGF41052.1 | open | 1122 [NA] | 373 [AA] | 1328-2449 | HMPREF0647_11435 | hypothetical protein |
| 2078 | JRNQ01000138.1 | KGF41023.1 | open | 1233 [NA] | 410 [AA] | 297-1529 | HMPREF0647_11445 | integrase |
| 2079 | JRNQ01000138.1 | KGF41024.1 | open | 468 [NA] | 155 [AA] | 1557-2024 | HMPREF0647_11450 | hypothetical protein |
| 2080 | JRNQ01000138.1 | KGF41025.1 | open | 341 [NA] | 114 [AA] | 2164->2504 | HMPREF0647_11455 | hypothetical protein |
| 2081 | JRNQ01000139.1 | KGF40972.1 | open | 2202 [NA] | 733 [AA] | 272-2473 | HMPREF0647_11460 | hypothetical protein |
| 2082 | JRNQ01000140.1 | KGF40882.1 | open | 633 [NA] | 210 [AA] | 1043-1675 | HMPREF0647_11470 | hypothetical protein |
| 2083 | JRNQ01000140.1 | KGF40883.1 | open | 762 [NA] | 253 [AA] | 1706-2467 | HMPREF0647_11475 | hypothetical protein |
| 2084 | JRNQ01000140.1 | KGF40884.1 | open | 968 [NA] | 323 [AA] | <1-968 | HMPREF0647_11465 | conjugal transfer protein |
| 2085 | JRNQ01000141.1 | KGF40841.1 | open | 1065 [NA] | 354 [AA] | 206-1270 | HMPREF0647_11485 | hypothetical protein |
| 2086 | JRNQ01000141.1 | KGF40842.1 | open | 507 [NA] | 168 [AA] | 1391-1897 | HMPREF0647_11490 | lysozyme |
| 2087 | JRNQ01000141.1 | KGF40843.1 | open | 213 [NA] | 70 [AA] | 1884->2097 | HMPREF0647_11495 | conjugal transfer protein |
| 2088 | JRNQ01000142.1 | KGF40758.1 | open | 495 [NA] | 164 [AA] | 572-1066 | HMPREF0647_11500 | hypothetical protein |
| 2089 | JRNQ01000142.1 | KGF40759.1 | open | 360 [NA] | 120 [AA] | 1426->1785 | HMPREF0647_11505 | hypothetical protein |
| 2090 | JRNQ01000143.1 | KGF40711.1 | open | 1497 [NA] | 498 [AA] | <1-1499 | HMPREF0647_11510 | DNA topoisomerase I |
| 2091 | JRNQ01000144.1 | KGF40639.1 | open | 518 [NA] | 172 [AA] | <1->520 | HMPREF0647_11520 | PcfJ-like protein |
| 2092 | JRNQ01000145.1 | KGF40591.1 | open | 271 [NA] | 90 [AA] | <1-271 | HMPREF0647_11525 | PcfJ-like protein |
| 2093 | JRNQ01000145.1 | KGF40592.1 | open | 420 [NA] | 139 [AA] | 276-695 | HMPREF0647_11530 | PcfK-like protein |
| 2094 | JRNQ01000145.1 | KGF40593.1 | open | 300 [NA] | 99 [AA] | 692-991 | HMPREF0647_11535 | hypothetical protein |
| 2095 | JRNQ01000146.1 | KGF40574.1 | open | 1044 [NA] | 347 [AA] | 292-1335 | HMPREF0647_11540 | transposase |
| 2096 | JRNQ01000147.1 | KGF40480.1 | open | 1395 [NA] | 465 [AA] | <1->1397 | HMPREF0647_11545 | hypothetical protein |
| 2097 | JRNQ01000148.1 | KGF40475.1 | open | 774 [NA] | 257 [AA] | 477-1250 | HMPREF0647_11550 | conjugal transfer protein TraA |
| 2098 | JRNQ01000148.1 | KGF40476.1 | open | 113 [NA] | 38 [AA] | 1265->1377 | HMPREF0647_11555 | conjugal transfer protein TraC |
| 2099 | JRNQ01000149.1 | KGF40432.1 | open | 1203 [NA] | 400 [AA] | 12-1214 | HMPREF0647_11560 | transposase |
| 2100 | JRNQ01000150.1 | KGF40428.1 | open | 417 [NA] | 138 [AA] | 414-830 | HMPREF0647_11565 | hypothetical protein |
| 2101 | JRNQ01000150.1 | KGF40429.1 | open | 180 [NA] | 59 [AA] | 827-1006 | HMPREF0647_11570 | hypothetical protein |
| 2102 | JRNQ01000151.1 | KGF40311.1 | open | 506 [NA] | 169 [AA] | <1->507 | HMPREF0647_11575 | conjugal transfer protein TraM |
| 2103 | JRNQ01000152.1 | KGF40297.1 | open | 437 [NA] | 146 [AA] | 252->688 | HMPREF0647_11585 | conjugal transfer protein |
| 2104 | JRNQ01000153.1 | KGF40294.1 | open | 1194 [NA] | 398 [AA] | <1->1195 | HMPREF0647_11590 | hypothetical protein |
| 2105 | JRNQ01000154.1 | KGF40159.1 | open | 1194 [NA] | 398 [AA] | <1->1195 | HMPREF0647_11595 | hypothetical protein |
| 2106 | JRNQ01000155.1 | KGF40157.1 | open | 348 [NA] | 115 [AA] | <1-349 | HMPREF0647_11600 | conjugal transfer protein |
| 2107 | JRNQ01000155.1 | KGF40158.1 | open | 507 [NA] | 168 [AA] | 336-842 | HMPREF0647_11605 | lysozyme |
| 2108 | JRNQ01000156.1 | KGF40097.1 | open | 294 [NA] | 97 [AA] | 169-462 | HMPREF0647_11615 | hypothetical protein |
| 2109 | JRNQ01000156.1 | KGF40098.1 | open | 597 [NA] | 198 [AA] | 482-1078 | HMPREF0647_11620 | hypothetical protein |
| 2110 | JRNQ01000157.1 | KGF40094.1 | open | 198 [NA] | 65 [AA] | 244-441 | HMPREF0647_11630 | hypothetical protein |
| 2111 | JRNQ01000157.1 | KGF40095.1 | open | 624 [NA] | 207 [AA] | 460-1083 | HMPREF0647_11635 | conjugal transfer protein |
| 2112 | JRNQ01000158.1 | KGF40043.1 | open | 387 [NA] | 128 [AA] | 65-451 | HMPREF0647_11640 | hypothetical protein |
| 2113 | JRNQ01000159.1 | KGF39998.1 | open | 536 [NA] | 179 [AA] | <1->537 | HMPREF0647_11645 | transposase |
| 2114 | JRNQ01000160.1 | KGF39954.1 | open | 591 [NA] | 197 [AA] | 451->1041 | HMPREF0647_11650 | hypothetical protein |
| 2115 | JRNQ01000161.1 | KGF39945.1 | open | 638 [NA] | 212 [AA] | 262->899 | HMPREF0647_11660 | integrase |
| 2116 | JRNQ01000162.1 | KGF39880.1 | open | 696 [NA] | 231 [AA] | 153->850 | HMPREF0647_11665 | transposase |
| 2117 | JRNQ01000163.1 | KGF39876.1 | open | 482 [NA] | 160 [AA] | <1-482 | HMPREF0647_11670 | transposase |
| 2118 | JRNQ01000164.1 | KGF39869.1 | open | 804 [NA] | 268 [AA] | 29->832 | HMPREF0647_11675 | transposase |
| 2119 | JRNQ01000165.1 | KGF39827.1 | open | 354 [NA] | 117 [AA] | 390->744 | HMPREF0647_11680 | transposase |
| 2120 | JRNQ01000166.1 | KGF39737.1 | open | 640 [NA] | 213 [AA] | <1->642 | HMPREF0647_11685 | DNA helicase |
| 2121 | JRNQ01000167.1 | KGF39673.1 | open | 591 [NA] | 197 [AA] | <1-591 | HMPREF0647_11690 | hypothetical protein |
| 2122 | JRNQ01000169.1 | KGF39632.1 | open | 390 [NA] | 129 [AA] | 29-418 | HMPREF0647_11700 | hypothetical protein |
| 2123 | JRNQ01000170.1 | KGF39591.1 | open | 420 [NA] | 139 [AA] | 104-523 | HMPREF0647_11710 | PcfK-like protein |
| 2124 | JRNQ01000171.1 | KGF39536.1 | open | 420 [NA] | 139 [AA] | 57-476 | HMPREF0647_11715 | PcfK-like protein |
| 2125 | JRNQ01000172.1 | KGF39469.1 | open | 542 [NA] | 181 [AA] | <1->544 | HMPREF0647_11720 | ABC transporter ATP-binding protein |
| 2126 | JRNQ01000173.1 | KGF39466.1 | open | 543 [NA] | 181 [AA] | <1->544 | HMPREF0647_11725 | conjugal transfer protein TraG |
| 2127 | JRNQ01000174.1 | KGF39416.1 | open | 543 [NA] | 181 [AA] | <1->544 | HMPREF0647_11730 | conjugal transfer protein TraG |
| 2128 | JRNQ01000175.1 | KGF39337.1 | open | 543 [NA] | 181 [AA] | <1->544 | HMPREF0647_11735 | transposase |
| 2129 | JRNQ01000176.1 | KGF39308.1 | open | 543 [NA] | 181 [AA] | <1->544 | HMPREF0647_11740 | transposase |
| 2130 | JRNQ01000177.1 | KGF39274.1 | open | 414 [NA] | 138 [AA] | 125->538 | HMPREF0647_11750 | conjugal transfer protein |
| 2131 | JRNQ01000178.1 | KGF39273.1 | open | 453 [NA] | 150 [AA] | 21-473 | HMPREF0647_11755 | hypothetical protein |
| 2132 | JRNQ01000179.1 | KGF39225.1 | open | 246 [NA] | 81 [AA] | 195-440 | HMPREF0647_11765 | hypothetical protein |