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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Variovorax paradoxus CSUSB (SEQF3742.1)
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NCBI Annotation for SEQF3742.1
Genome selected: Variovorax paradoxus CSUSB
Contigs:1 Bases:5574400 bps
CDS:58 rRNA:6
tmRNA:1 tRNA:52
Annotation Table [page:11]
Number of Records Found: 5089 [11 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
5001 CP046622.1 QGW85068.1 open 315 [NA] 104 [AA] 4201739-4202053 GOQ09_19555 QacE family quaternary ammonium compound efflux SMR transporter
5002 CP046622.1 QGW85069.1 open 570 [NA] 189 [AA] 4216949-4217518 GOQ09_19625 TetR family transcriptional regulator
5003 CP046622.1 QGW85070.1 open 999 [NA] 332 [AA] 4223590-4224588 GOQ09_19655 helix-turn-helix domain-containing protein
5004 CP046622.1 QGW85071.1 open 1041 [NA] 346 [AA] 4238780-4239820 GOQ09_19710 sorbosone dehydrogenase family protein
5005 CP046622.1 QGW85072.1 open 1419 [NA] 472 [AA] 4269323-4270741 GOQ09_19845 aldehyde dehydrogenase family protein
5006 CP046622.1 QGW85073.1 open 1419 [NA] 472 [AA] 4297827-4299245 GOQ09_19980 DUF3526 domain-containing protein
5007 CP046622.1 QGW85074.1 open 342 [NA] 113 [AA] 4305453-4305794 GOQ09_20015 hypothetical protein
5008 CP046622.1 QGW85075.1 open 1131 [NA] 376 [AA] 4305965-4307095 GOQ09_20020 MFS transporter
5009 CP046622.1 QGW85076.1 open 1032 [NA] 343 [AA] 4307188-4308219 GOQ09_20025 alpha/beta fold hydrolase
5010 CP046622.1 QGW85077.1 open 600 [NA] 199 [AA] 4327377-4327976 GOQ09_20110 TRAP transporter small permease subunit
5011 CP046622.1 QGW85078.1 open 522 [NA] 173 [AA] 4341449-4341970 GOQ09_20190 nucleoside deaminase
5012 CP046622.1 QGW85079.1 open 420 [NA] 139 [AA] 4344204-4344623 GOQ09_20210 sel1 repeat family protein
5013 CP046622.1 QGW85080.1 open 1221 [NA] 406 [AA] 4344744-4345964 GOQ09_20215 M20/M25/M40 family metallo-hydrolase
5014 CP046622.1 QGW85081.1 open 525 [NA] 174 [AA] 4348538-4349062 GOQ09_20230 hydrolase Nlp/P60
5015 CP046622.1 QGW85082.1 open 477 [NA] 158 [AA] 4359627-4360103 GOQ09_20295 SgcJ/EcaC family oxidoreductase
5016 CP046622.1 QGW85083.1 open 756 [NA] 251 [AA] 4369639-4370394 GOQ09_20355 LuxR family transcriptional regulator
5017 CP046622.1 QGW85084.1 open 939 [NA] 312 [AA] 4371147-4372085 GOQ09_20365 tripartite tricarboxylate transporter substrate binding protein
5018 CP046622.1 QGW85085.1 open 900 [NA] 299 [AA] 4375219-4376118 GOQ09_20385 LysR family transcriptional regulator
5019 CP046622.1 QGW85086.1 open 1548 [NA] 515 [AA] 4389400-4390947 GOQ09_20455 urea ABC transporter permease subunit UrtB
5020 CP046622.1 QGW85087.1 open 621 [NA] 206 [AA] 4392588-4393208 GOQ09_20465 transcriptional regulator
5021 CP046622.1 QGW85088.1 open 333 [NA] 110 [AA] 4423236-4423568 GOQ09_20640 cytochrome o ubiquinol oxidase subunit IV
5022 CP046622.1 QGW85089.1 open 822 [NA] 273 [AA] 4423607-4424428 GOQ09_20645 SURF1 family protein
5023 CP046622.1 QGW85090.1 open 2115 [NA] 704 [AA] 4439075-4441189 GOQ09_20720 4Fe-4S dicluster domain-containing protein
5024 CP046622.1 QGW85091.1 open 744 [NA] 247 [AA] 4443228-4443971 GOQ09_20740 molybdate ABC transporter substrate-binding protein
5025 CP046622.1 QGW85092.1 open 1584 [NA] 527 [AA] 4464345-4465928 GOQ09_20840 L-aspartate oxidase
5026 CP046622.1 QGW85093.1 open 1443 [NA] 480 [AA] 4474232-4475674 GOQ09_20900 PDZ domain-containing protein
5027 CP046622.1 QGW85094.1 open 1320 [NA] 439 [AA] 4480059-4481378 GOQ09_20925 histidine kinase
5028 CP046622.1 QGW85095.1 open 432 [NA] 143 [AA] 4497509-4497940 GOQ09_21035 HIT domain-containing protein
5029 CP046622.1 QGW85096.1 open 1740 [NA] 579 [AA] 4512831-4514570 GOQ09_21090 ShlB/FhaC/HecB family hemolysin secretion/activation protein
5030 CP046622.1 QGW85097.1 open 357 [NA] 118 [AA] 4544835-4545191 GOQ09_21195 flagellar transcriptional regulator FlhD
5031 CP046622.1 QGW85098.1 open 279 [NA] 92 [AA] 4547022-4547300 GOQ09_21210 flagellar protein FliT
5032 CP046622.1 QGW85099.1 open 648 [NA] 215 [AA] 4554775-4555422 GOQ09_21250 flagellar assembly protein FliH
5033 CP046622.1 QGW85100.1 open 1716 [NA] 571 [AA] 4570407-4572122 GOQ09_21325 HAMP domain-containing protein
5034 CP046622.1 QGW85101.1 open 444 [NA] 147 [AA] 4578043-4578486 GOQ09_21350 chemotaxis protein CheW
5035 CP046622.1 QGW85102.1 open 714 [NA] 237 [AA] 4585949-4586662 GOQ09_21400 flagellar basal body P-ring formation protein FlgA
5036 CP046622.1 QGW85103.1 open 849 [NA] 282 [AA] 4591333-4592181 GOQ09_21435 peptide chain release factor N(5)-glutamine methyltransferase
5037 CP046622.1 QGW85104.1 open 669 [NA] 222 [AA] 4597005-4597673 GOQ09_21465 RNA pyrophosphohydrolase
5038 CP046622.1 QGW85105.1 open 525 [NA] 174 [AA] 4597690-4598214 GOQ09_21470 hypothetical protein
5039 CP046622.1 QGW85106.1 open 993 [NA] 330 [AA] 4601421-4602413 GOQ09_21495 octaprenyl diphosphate synthase
5040 CP046622.1 QGW85107.1 open 1494 [NA] 497 [AA] 4607306-4608799 GOQ09_21525 MBOAT family protein
5041 CP046622.1 QGW85108.1 open 603 [NA] 200 [AA] 4622112-4622714 GOQ09_21590 hypothetical protein
5042 CP046622.1 QGW85109.1 open 588 [NA] 195 [AA] 4637173-4637760 GOQ09_21665 L,D-transpeptidase
5043 CP046622.1 QGW85110.1 open 513 [NA] 170 [AA] 4696383-4696895 GOQ09_21875 hypothetical protein
5044 CP046622.1 QGW85111.1 open 465 [NA] 154 [AA] 4700631-4701095 GOQ09_21905 hypothetical protein
5045 CP046622.1 QGW85112.1 open 1428 [NA] 475 [AA] 4721807-4723234 GOQ09_22025 insulinase family protein
5046 CP046622.1 QGW85113.1 open 465 [NA] 154 [AA] 4728359-4728823 GOQ09_22050 DUF962 domain-containing protein
5047 CP046622.1 QGW85114.1 open 834 [NA] 277 [AA] 4771552-4772385 GOQ09_22285 alpha/beta fold hydrolase
5048 CP046622.1 QGW85115.1 open 1305 [NA] 434 [AA] 4790989-4792293 GOQ09_22385 type II and III secretion system protein family protein
5049 CP046622.1 QGW85116.1 open 1416 [NA] 471 [AA] 4830395-4831810 GOQ09_22550 pyruvate kinase
5050 CP046622.1 QGW85117.1 open 939 [NA] 312 [AA] 4849621-4850559 GOQ09_22650 pectate lyase
5051 CP046622.1 QGW85118.1 open 918 [NA] 305 [AA] 4883103-4884020 GOQ09_22790 ribokinase
5052 CP046622.1 QGW85119.1 open 387 [NA] 128 [AA] 4891069-4891455 GOQ09_22830 hypothetical protein
5053 CP046622.1 QGW85120.1 open 1284 [NA] 427 [AA] 4898403-4899686 GOQ09_22875 c-type cytochrome
5054 CP046622.1 QGW85121.1 open 675 [NA] 224 [AA] 4907571-4908245 GOQ09_22920 1-acyl-sn-glycerol-3-phosphate acyltransferase
5055 CP046622.1 QGW85122.1 open 948 [NA] 315 [AA] 4911066-4912013 GOQ09_22945 AAA family ATPase
5056 CP046622.1 QGW85123.1 open 612 [NA] 203 [AA] 4915080-4915691 GOQ09_22975 OmpA family protein
5057 CP046622.1 QGW85124.1 open 1116 [NA] 371 [AA] 4943937-4945052 GOQ09_23095 ABC transporter substrate-binding protein
5058 CP046622.1 QGW85125.1 open 1425 [NA] 474 [AA] 4970360-4971784 GOQ09_23220 indoleacetamide hydrolase
5059 CP046622.1 QGW85126.1 open 960 [NA] 319 [AA] 4984450-4985409 GOQ09_23280 DUF45 domain-containing protein
5060 CP046622.1 QGW85127.1 open 1614 [NA] 537 [AA] 5054224-5055837 GOQ09_23590 AMP-binding protein
5061 CP046622.1 QGW85128.1 open 2085 [NA] 694 [AA] 5066227-5068311 GOQ09_23635 prolyl oligopeptidase family serine peptidase
5062 CP046622.1 QGW85129.1 open 696 [NA] 231 [AA] 5069248-5069943 GOQ09_23645 DUF2242 domain-containing protein
5063 CP046622.1 QGW85130.1 open 594 [NA] 197 [AA] 5124104-5124697 GOQ09_23840 LemA family protein
5064 CP046622.1 QGW85131.1 open 2637 [NA] 878 [AA] 5127518-5130154 GOQ09_23865 ligase-associated DNA damage response DEXH box helicase
5065 CP046622.1 QGW85132.1 open 1002 [NA] 333 [AA] 5136694-5137695 GOQ09_23900 ABC transporter permease
5066 CP046622.1 QGW85133.1 open 1170 [NA] 389 [AA] 5139214-5140383 GOQ09_23910 ROK family protein
5067 CP046622.1 QGW85134.1 open 474 [NA] 157 [AA] 5147275-5147748 GOQ09_23955 ATP synthase subunit I
5068 CP046622.1 QGW85135.1 open 756 [NA] 251 [AA] 5158213-5158968 GOQ09_24015 response regulator
5069 CP046622.1 QGW85136.1 open 1269 [NA] 422 [AA] 5163131-5164399 GOQ09_24050 MFS transporter
5070 CP046622.1 QGW85137.1 open 210 [NA] 69 [AA] 5168338-5168547 GOQ09_24090 50S ribosomal protein L29
5071 CP046622.1 QGW85138.1 open 1602 [NA] 533 [AA] 5173883-5175484 GOQ09_24140 hypothetical protein
5072 CP046622.1 QGW85139.1 open 1116 [NA] 371 [AA] 5183022-5184137 GOQ09_24185 VanZ family protein
5073 CP046622.1 QGW85140.1 open 990 [NA] 329 [AA] 5184949-5185938 GOQ09_24195 porphobilinogen synthase
5074 CP046622.1 QGW85141.1 open 960 [NA] 319 [AA] 5220043-5221002 GOQ09_24355 tripartite tricarboxylate transporter substrate binding protein
5075 CP046622.1 QGW85142.1 open 366 [NA] 121 [AA] 5315106-5315471 GOQ09_24820 50S ribosomal protein L18
5076 CP046622.1 QGW85143.1 open 1515 [NA] 504 [AA] 5323148-5324662 GOQ09_24880 tripartite tricarboxylate transporter permease
5077 CP046622.1 QGW85144.1 open 1569 [NA] 522 [AA] 5347580-5349148 GOQ09_25005 prolyl oligopeptidase family serine peptidase
5078 CP046622.1 QGW85145.1 open 1299 [NA] 432 [AA] 5353329-5354627 GOQ09_25035 type II toxin-antitoxin system HipA family toxin
5079 CP046622.1 QGW85146.1 open 270 [NA] 89 [AA] 5359790-5360059 GOQ09_25070 hypothetical protein
5080 CP046622.1 QGW85147.1 open 816 [NA] 271 [AA] 5392758-5393573 GOQ09_25220 ABC transporter permease subunit
5081 CP046622.1 QGW85148.1 open 654 [NA] 217 [AA] 5397974-5398627 GOQ09_25245 TetR family transcriptional regulator
5082 CP046622.1 QGW85149.1 open 1752 [NA] 583 [AA] 5418299-5420050 GOQ09_25305 ShlB/FhaC/HecB family hemolysin secretion/activation protein
5083 CP046622.1 QGW85150.1 open 612 [NA] 203 [AA] 5443615-5444226 GOQ09_25390 glutathione peroxidase
5084 CP046622.1 QGW85151.1 open 3705 [NA] 1234 [AA] 5458187-5461891 GOQ09_25465 fimbrial assembly protein
5085 CP046622.1 QGW85152.1 open 864 [NA] 287 [AA] 5463751-5464614 GOQ09_25485 prepilin-type N-terminal cleavage/methylation domain-containing protein
5086 CP046622.1 QGW85153.1 open 807 [NA] 268 [AA] 5470926-5471732 GOQ09_25520 Stp1/IreP family PP2C-type Ser/Thr phosphatase
5087 CP046622.1 QGW85154.1 open 267 [NA] 88 [AA] 5491715-5491981 GOQ09_25625 hypothetical protein
5088 CP046622.1 QGW85155.1 open 612 [NA] 203 [AA] 5522429-5523040 GOQ09_25790 hypothetical protein
5089 CP046622.1 QGW85156.1 open 426 [NA] 141 [AA] 5543455-5543880 GOQ09_25890 barnase inhibitor