Genome Explorer: Brevundimonas diminuta 3F5N (SEQF4741.1)
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NCBI Annotation for SEQF4741.1
| Genome selected: Brevundimonas diminuta 3F5N | |||
| Contigs: | 89 | Bases: | 3250103 bps |
| CDS: | 3128 | rRNA: | 3 |
| tmRNA: | 0 | tRNA: | 47 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3001 | FUIE01000085.1 | SJM70647.1 | open | 411 [NA] | 136 [AA] | 44814-45224 | FM111_15255 | possible activator of photopigment and puc with BLUF domain |
| 3002 | FUIE01000085.1 | SJM70653.1 | open | 747 [NA] | 248 [AA] | 45286-46032 | FM111_15260 | Molybdopterin biosynthesis protein MoeB |
| 3003 | FUIE01000085.1 | SJM70658.1 | open | 987 [NA] | 328 [AA] | 46029-47015 | FM111_15265 | Glyoxylate reductase / Glyoxylate reductase / Hydroxypyruvate reductase |
| 3004 | FUIE01000085.1 | SJM70663.1 | open | 507 [NA] | 168 [AA] | 47135-47641 | FM111_15270 | hypothetical protein |
| 3005 | FUIE01000085.1 | SJM70667.1 | open | 540 [NA] | 179 [AA] | 47722-48261 | FM111_15275 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form |
| 3006 | FUIE01000085.1 | SJM70670.1 | open | 1230 [NA] | 409 [AA] | 48324-49553 | FM111_15280 | 3-oxoacyl-[acyl-carrier-protein] synthase, KASI |
| 3007 | FUIE01000085.1 | SJM70673.1 | open | 1398 [NA] | 465 [AA] | 49884-51281 | FM111_15285 | HtrA protease/chaperone protein |
| 3008 | FUIE01000085.1 | SJM70675.1 | open | 1206 [NA] | 401 [AA] | 51358-52563 | FM111_15290 | Glutaryl-CoA dehydrogenase |
| 3009 | FUIE01000085.1 | SJM70677.1 | open | 267 [NA] | 88 [AA] | 52705-52971 | FM111_15295 | hypothetical protein |
| 3010 | FUIE01000085.1 | SJM70679.1 | open | 519 [NA] | 172 [AA] | 52987-53505 | FM111_15300 | hypothetical protein |
| 3011 | FUIE01000085.1 | SJM70681.1 | open | 444 [NA] | 147 [AA] | 53580-54023 | FM111_15305 | hypothetical protein |
| 3012 | FUIE01000085.1 | SJM70682.1 | open | 1506 [NA] | 501 [AA] | 54115-55620 | FM111_15310 | Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex |
| 3013 | FUIE01000085.1 | SJM70686.1 | open | 3021 [NA] | 1006 [AA] | 55676-58696 | FM111_15315 | 2-oxoglutarate dehydrogenase E1 component |
| 3014 | FUIE01000085.1 | SJM70691.1 | open | 135 [NA] | 44 [AA] | 58808-58942 | FM111_15320 | hypothetical protein |
| 3015 | FUIE01000085.1 | SJM70694.1 | open | 903 [NA] | 300 [AA] | 59040-59942 | FM111_15325 | Succinyl-CoA ligase [ADP-forming] alpha chain |
| 3016 | FUIE01000085.1 | SJM70698.1 | open | 1191 [NA] | 396 [AA] | 59989-61179 | FM111_15330 | Succinyl-CoA ligase [ADP-forming] beta chain |
| 3017 | FUIE01000085.1 | SJM70701.1 | open | 1389 [NA] | 462 [AA] | 61345-62733 | FM111_15335 | Major facilitator family transporter |
| 3018 | FUIE01000085.1 | SJM70703.1 | open | 2265 [NA] | 754 [AA] | 62856-65120 | FM111_15340 | Outer membrane receptor proteins, mostly Fe transport |
| 3019 | FUIE01000085.1 | SJM70706.1 | open | 729 [NA] | 242 [AA] | 65292-66020 | FM111_15345 | Transcriptional regulator, TetR family |
| 3020 | FUIE01000085.1 | SJM70709.1 | open | 783 [NA] | 260 [AA] | 66017-66799 | FM111_15350 | hypothetical protein |
| 3021 | FUIE01000085.1 | SJM70712.1 | open | 981 [NA] | 326 [AA] | 66804-67784 | FM111_15355 | Magnesium and cobalt transport protein CorA |
| 3022 | FUIE01000085.1 | SJM70715.1 | open | 1482 [NA] | 493 [AA] | 68007-69488 | FM111_15360 | Lignostilbene-alpha,beta-dioxygenase and related enzymes |
| 3023 | FUIE01000085.1 | SJM70719.1 | open | 531 [NA] | 176 [AA] | 69495-70025 | FM111_15365 | hypothetical protein |
| 3024 | FUIE01000085.1 | SJM70726.1 | open | 684 [NA] | 227 [AA] | 70124-70807 | FM111_15370 | Ribulose-phosphate 3-epimerase |
| 3025 | FUIE01000085.1 | SJM70732.1 | open | 1815 [NA] | 604 [AA] | 70804-72618 | FM111_15375 | Heparinase II/III-like |
| 3026 | FUIE01000085.1 | SJM70737.1 | open | 339 [NA] | 112 [AA] | 72675-73013 | FM111_15380 | hypothetical protein |
| 3027 | FUIE01000085.1 | SJM70740.1 | open | 1605 [NA] | 534 [AA] | 73080-74684 | FM111_15385 | IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase |
| 3028 | FUIE01000085.1 | SJM70745.1 | open | 816 [NA] | 271 [AA] | 74797-75612 | FM111_15390 | iron-chelator utilization protein |
| 3029 | FUIE01000085.1 | SJM70750.1 | open | 567 [NA] | 188 [AA] | 75609-76175 | FM111_15395 | Transcriptional regulator, PadR family |
| 3030 | FUIE01000085.1 | SJM70755.1 | open | 750 [NA] | 249 [AA] | 76349-77098 | FM111_15400 | hypothetical protein |
| 3031 | FUIE01000085.1 | SJM70757.1 | open | 489 [NA] | 162 [AA] | 77170-77658 | FM111_15405 | Rrf2 family transcriptional regulator, group III |
| 3032 | FUIE01000085.1 | SJM70761.1 | open | 924 [NA] | 307 [AA] | 77627-78550 | FM111_15410 | Thioredoxin reductase |
| 3033 | FUIE01000085.1 | SJM70765.1 | open | 465 [NA] | 154 [AA] | 78556-79020 | FM111_15415 | OsmC/Ohr family protein |
| 3034 | FUIE01000085.1 | SJM70769.1 | open | 741 [NA] | 246 [AA] | 79054-79794 | FM111_15420 | Acetyltransferase |
| 3035 | FUIE01000085.1 | SJM70773.1 | open | 1038 [NA] | 345 [AA] | 79800-80837 | FM111_15425 | Tryptophanyl-tRNA synthetase |
| 3036 | FUIE01000085.1 | SJM70777.1 | open | 243 [NA] | 80 [AA] | 80814-81056 | FM111_15430 | hypothetical protein |
| 3037 | FUIE01000085.1 | SJM70782.1 | open | 504 [NA] | 167 [AA] | 81088-81591 | FM111_15435 | hypothetical protein |
| 3038 | FUIE01000085.1 | SJM70786.1 | open | 1707 [NA] | 568 [AA] | 81586-83292 | FM111_15440 | Proposed peptidoglycan lipid II flippase MurJ |
| 3039 | FUIE01000085.1 | SJM70789.1 | open | 2703 [NA] | 900 [AA] | 83323-86025 | FM111_15445 | [Protein-PII] uridylyltransferase |
| 3040 | FUIE01000085.1 | SJM70795.1 | open | 2706 [NA] | 901 [AA] | 86176-88881 | FM111_15450 | DNA mismatch repair protein MutS |
| 3041 | FUIE01000085.1 | SJM70800.1 | open | 900 [NA] | 299 [AA] | 88977-89876 | FM111_15455 | hypothetical protein |
| 3042 | FUIE01000085.1 | SJM70804.1 | open | 633 [NA] | 210 [AA] | 89946-90578 | FM111_15460 | Maleylacetoacetate isomerase @ Glutathione S-transferase, zeta |
| 3043 | FUIE01000085.1 | SJM70809.1 | open | 654 [NA] | 217 [AA] | 90575-91228 | FM111_15465 | Fumarylacetoacetate hydrolase family protein |
| 3044 | FUIE01000085.1 | SJM70814.1 | open | 345 [NA] | 114 [AA] | 91387-91731 | FM111_15470 | hypothetical protein |
| 3045 | FUIE01000085.1 | SJM70817.1 | open | 411 [NA] | 136 [AA] | 91731-92141 | FM111_15475 | hypothetical protein |
| 3046 | FUIE01000085.1 | SJM70822.1 | open | 180 [NA] | 59 [AA] | 92244-92423 | FM111_15480 | Protein of unknown function DUF1328 |
| 3047 | FUIE01000085.1 | SJM70827.1 | open | 789 [NA] | 262 [AA] | 92493-93281 | FM111_15485 | Metallophosphoesterase |
| 3048 | FUIE01000085.1 | SJM70832.1 | open | 966 [NA] | 321 [AA] | 93281-94246 | FM111_15490 | hypothetical protein |
| 3049 | FUIE01000085.1 | SJM70838.1 | open | 354 [NA] | 117 [AA] | 94401-94754 | FM111_15495 | hypothetical protein |
| 3050 | FUIE01000085.1 | SJM70840.1 | open | 456 [NA] | 151 [AA] | 94881-95336 | FM111_15500 | OmpA family protein |
| 3051 | FUIE01000085.1 | SJM70846.1 | open | 2214 [NA] | 737 [AA] | 95442-97655 | FM111_15505 | Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase |
| 3052 | FUIE01000085.1 | SJM70850.1 | open | 675 [NA] | 224 [AA] | 97679-98353 | FM111_15510 | PPO candidate 1 |
| 3053 | FUIE01000085.1 | SJM70854.1 | open | 477 [NA] | 158 [AA] | 98438-98914 | FM111_15515 | hypothetical protein |
| 3054 | FUIE01000085.1 | SJM70856.1 | open | 1605 [NA] | 534 [AA] | 99065-100669 | FM111_15520 | Glucose-6-phosphate isomerase |
| 3055 | FUIE01000085.1 | SJM70859.1 | open | 390 [NA] | 129 [AA] | 100666-101055 | FM111_15525 | hypothetical protein |
| 3056 | FUIE01000085.1 | SJM70862.1 | open | 468 [NA] | 155 [AA] | 101146-101613 | FM111_15530 | Kef-type K+ transport systems, predicted NAD-binding component |
| 3057 | FUIE01000085.1 | SJM70865.1 | open | 474 [NA] | 157 [AA] | 101672-102145 | FM111_15535 | putative membrane protein |
| 3058 | FUIE01000085.1 | SJM70868.1 | open | 288 [NA] | 95 [AA] | 102385-102672 | FM111_15540 | Heat shock protein 60 family co-chaperone GroES |
| 3059 | FUIE01000085.1 | SJM70870.1 | open | 1647 [NA] | 548 [AA] | 102782-104428 | FM111_15545 | Heat shock protein 60 family chaperone GroEL |
| 3060 | FUIE01000085.1 | SJM70873.1 | open | 945 [NA] | 314 [AA] | 104679-105623 | FM111_15550 | Glycine cleavage system transcriptional activator |
| 3061 | FUIE01000085.1 | SJM70876.1 | open | 1641 [NA] | 546 [AA] | 106015-107655 | FM111_15555 | Cytosol aminopeptidase PepA |
| 3062 | FUIE01000085.1 | SJM70879.1 | open | 495 [NA] | 164 [AA] | 107668-108162 | FM111_15560 | Transcription elongation factor GreB |
| 3063 | FUIE01000085.1 | SJM70880.1 | open | 1215 [NA] | 404 [AA] | 108198-109412 | FM111_15565 | NAD(FAD)-utilizing dehydrogenases |
| 3064 | FUIE01000085.1 | SJM70884.1 | open | 1656 [NA] | 551 [AA] | 109470-111125 | FM111_15570 | Peptidase |
| 3065 | FUIE01000085.1 | SJM70889.1 | open | 1146 [NA] | 381 [AA] | 111157-112302 | FM111_15575 | Esterase A |
| 3066 | FUIE01000086.1 | SJM70937.1 | open | 117 [NA] | 38 [AA] | 258-374 | FM111_15580 | hypothetical protein |
| 3067 | FUIE01000086.1 | SJM70940.1 | open | 375 [NA] | 124 [AA] | 601-975 | FM111_15585 | Mobile element protein |
| 3068 | FUIE01000086.1 | SJM70944.1 | open | 981 [NA] | 326 [AA] | 972-1952 | FM111_15590 | Chromosome (plasmid) partitioning protein ParB |
| 3069 | FUIE01000086.1 | SJM70947.1 | open | 888 [NA] | 295 [AA] | 2788-3675 | FM111_15595 | 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase |
| 3070 | FUIE01000086.1 | SJM70951.1 | open | 1782 [NA] | 593 [AA] | 3672-5453 | FM111_15600 | Oleate hydratase |
| 3071 | FUIE01000086.1 | SJM70956.1 | open | 693 [NA] | 230 [AA] | 6337-7029 | FM111_15605 | Mobile element protein |
| 3072 | FUIE01000086.1 | SJM70960.1 | open | 477 [NA] | 158 [AA] | 7120-7596 | FM111_15610 | hypothetical protein |
| 3073 | FUIE01000087.1 | SJM70986.1 | open | 888 [NA] | 295 [AA] | 292-1179 | FM111_15615 | Lysophospholipase |
| 3074 | FUIE01000087.1 | SJM70990.1 | open | 1095 [NA] | 364 [AA] | 1318-2412 | FM111_15620 | Leucine dehydrogenase |
| 3075 | FUIE01000087.1 | SJM70993.1 | open | 1644 [NA] | 547 [AA] | 2637-4280 | FM111_15625 | Flagellar M-ring protein FliF |
| 3076 | FUIE01000087.1 | SJM70997.1 | open | 1038 [NA] | 345 [AA] | 4280-5317 | FM111_15630 | Flagellar motor switch protein FliG |
| 3077 | FUIE01000087.1 | SJM71002.1 | open | 675 [NA] | 224 [AA] | 5319-5993 | FM111_15635 | FlbE protein |
| 3078 | FUIE01000087.1 | SJM71006.1 | open | 333 [NA] | 110 [AA] | 5993-6325 | FM111_15640 | Flagellar motor switch protein FliN |
| 3079 | FUIE01000087.1 | SJM71011.1 | open | 1155 [NA] | 384 [AA] | 6368-7522 | FM111_15645 | Transcriptional regulatory protein flbD |
| 3080 | FUIE01000087.1 | SJM71017.1 | open | 252 [NA] | 83 [AA] | 7530-7781 | FM111_15650 | Transcriptional regulatory protein flbD |
| 3081 | FUIE01000087.1 | SJM71021.1 | open | 885 [NA] | 294 [AA] | 7786-8670 | FM111_15655 | Beta-lactamase |
| 3082 | FUIE01000087.1 | SJM71025.1 | open | 2100 [NA] | 699 [AA] | 8718-10817 | FM111_15660 | Flagellar biosynthesis protein FlhA |
| 3083 | FUIE01000087.1 | SJM71030.1 | open | 1536 [NA] | 511 [AA] | 10872-12407 | FM111_15665 | Sensory box histidine kinase |
| 3084 | FUIE01000087.1 | SJM71035.1 | open | 423 [NA] | 140 [AA] | 12404-12826 | FM111_15670 | Two-component response regulator |
| 3085 | FUIE01000087.1 | SJM71039.1 | open | 1014 [NA] | 337 [AA] | 12861-13874 | FM111_15675 | hypothetical protein |
| 3086 | FUIE01000087.1 | SJM71044.1 | open | 477 [NA] | 158 [AA] | 13925-14401 | FM111_15680 | MutT/nudix family protein |
| 3087 | FUIE01000087.1 | SJM71049.1 | open | 183 [NA] | 60 [AA] | 14466-14648 | FM111_15685 | UPF0337 protein blr1496 |
| 3088 | FUIE01000087.1 | SJM71053.1 | open | 1515 [NA] | 504 [AA] | 14696-16210 | FM111_15690 | Beta-lactamase |
| 3089 | FUIE01000087.1 | SJM71057.1 | open | 1179 [NA] | 392 [AA] | 16267-17445 | FM111_15695 | hypothetical protein |
| 3090 | FUIE01000087.1 | SJM71061.1 | open | 528 [NA] | 175 [AA] | 17465-17992 | FM111_15700 | GCN5-related N-acetyltransferase |
| 3091 | FUIE01000087.1 | SJM71065.1 | open | 639 [NA] | 212 [AA] | 18228-18866 | FM111_15705 | hypothetical protein |
| 3092 | FUIE01000087.1 | SJM71067.1 | open | 258 [NA] | 85 [AA] | 18927-19184 | FM111_15710 | Exodeoxyribonuclease VII small subunit |
| 3093 | FUIE01000087.1 | SJM71071.1 | open | 357 [NA] | 118 [AA] | 19184-19540 | FM111_15715 | Protein secretion chaperonin CsaA |
| 3094 | FUIE01000087.1 | SJM71074.1 | open | 906 [NA] | 301 [AA] | 19543-20448 | FM111_15720 | Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase |
| 3095 | FUIE01000087.1 | SJM71080.1 | open | 1911 [NA] | 636 [AA] | 20516-22426 | FM111_15725 | 1-deoxy-D-xylulose 5-phosphate synthase |
| 3096 | FUIE01000087.1 | SJM71085.1 | open | 768 [NA] | 255 [AA] | 22550-23317 | FM111_15730 | Phosphate starvation-inducible protein PhoH, predicted ATPase |
| 3097 | FUIE01000087.1 | SJM71090.1 | open | 531 [NA] | 176 [AA] | 23629-24159 | FM111_15735 | carbonic anhydrase, family 3 |
| 3098 | FUIE01000087.1 | SJM71095.1 | open | 906 [NA] | 301 [AA] | 24349-25254 | FM111_15740 | hypothetical protein |
| 3099 | FUIE01000087.1 | SJM71098.1 | open | 2880 [NA] | 959 [AA] | 25381-28260 | FM111_15745 | hypothetical protein |
| 3100 | FUIE01000087.1 | SJM71103.1 | open | 1206 [NA] | 401 [AA] | 28399-29604 | FM111_15750 | Flagellar hook-length control protein FliK |
| 3101 | FUIE01000087.1 | SJM71107.1 | open | 1020 [NA] | 339 [AA] | 29591-30610 | FM111_15755 | Curli production assembly/transport component CsgG |
| 3102 | FUIE01000087.1 | SJM71110.1 | open | 441 [NA] | 146 [AA] | 30607-31047 | FM111_15760 | hfaA protein |
| 3103 | FUIE01000087.1 | SJM71115.1 | open | 669 [NA] | 222 [AA] | 31167-31835 | FM111_15765 | INTEGRAL MEMBRANE PROTEIN (Rhomboid family) |
| 3104 | FUIE01000087.1 | SJM71120.1 | open | 429 [NA] | 142 [AA] | 31908-32336 | FM111_15770 | Inosine-5'-monophosphate dehydrogenase |
| 3105 | FUIE01000088.1 | SJM71147.1 | open | 606 [NA] | 201 [AA] | 67-672 | FM111_15775 | Hypothetical protein VC0266 (sugar utilization related?) |
| 3106 | FUIE01000088.1 | SJM71149.1 | open | 321 [NA] | 106 [AA] | 656-976 | FM111_15780 | hypothetical protein |
| 3107 | FUIE01000088.1 | SJM71151.1 | open | 435 [NA] | 144 [AA] | 1024-1458 | FM111_15785 | Phenylacetic acid degradation protein PaaD, thioesterase |
| 3108 | FUIE01000088.1 | SJM71154.1 | open | 639 [NA] | 212 [AA] | 1442-2080 | FM111_15790 | hypothetical protein |
| 3109 | FUIE01000088.1 | SJM71157.1 | open | 618 [NA] | 205 [AA] | 2088-2705 | FM111_15795 | Glutathione S-transferase |
| 3110 | FUIE01000088.1 | SJM71161.1 | open | 216 [NA] | 71 [AA] | 2740-2955 | FM111_15800 | Nucleoside permease NupC |
| 3111 | FUIE01000089.1 | SJM71178.1 | open | 378 [NA] | 125 [AA] | 131-508 | FM111_15805 | Ferredoxin, 2Fe-2S |
| 3112 | FUIE01000089.1 | SJM71182.1 | open | 159 [NA] | 52 [AA] | 531-689 | FM111_15810 | hypothetical protein |
| 3113 | FUIE01000089.1 | SJM71186.1 | open | 465 [NA] | 154 [AA] | 762-1226 | FM111_15815 | hypothetical protein |
| 3114 | FUIE01000089.1 | SJM71189.1 | open | 780 [NA] | 259 [AA] | 1256-2035 | FM111_15820 | Creatinine amidohydrolase |
| 3115 | FUIE01000089.1 | SJM71193.1 | open | 600 [NA] | 199 [AA] | 2122-2721 | FM111_15825 | transcriptional regulator, TetR family |
| 3116 | FUIE01000089.1 | SJM71197.1 | open | 1590 [NA] | 529 [AA] | 2721-4310 | FM111_15830 | Multidrug resistance protein B |
| 3117 | FUIE01000089.1 | SJM71199.1 | open | 1122 [NA] | 373 [AA] | 4307-5428 | FM111_15835 | Membrane fusion component of tripartite multidrug resistance system |
| 3118 | FUIE01000089.1 | SJM71201.1 | open | 765 [NA] | 254 [AA] | 5566-6330 | FM111_15840 | Endonuclease III |
| 3119 | FUIE01000089.1 | SJM71205.1 | open | 891 [NA] | 296 [AA] | 6335-7225 | FM111_15845 | hypothetical protein |
| 3120 | FUIE01000089.1 | SJM71208.1 | open | 1110 [NA] | 369 [AA] | 7299-8408 | FM111_15850 | Fructokinase |
| 3121 | FUIE01000089.1 | SJM71212.1 | open | 720 [NA] | 239 [AA] | 8478-9197 | FM111_15855 | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
| 3122 | FUIE01000089.1 | SJM71217.1 | open | 153 [NA] | 50 [AA] | 9208-9360 | FM111_15860 | hypothetical protein |
| 3123 | FUIE01000089.1 | SJM71220.1 | open | 564 [NA] | 187 [AA] | 9357-9920 | FM111_15865 | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
| 3124 | FUIE01000089.1 | SJM71225.1 | open | 129 [NA] | 42 [AA] | 9962-10090 | FM111_15870 | hypothetical protein |
| 3125 | FUIE01000089.1 | SJM71230.1 | open | 132 [NA] | 43 [AA] | 10089-10220 | FM111_15875 | hypothetical protein |
| 3126 | FUIE01000089.1 | SJM71235.1 | open | 669 [NA] | 222 [AA] | 10307-10975 | FM111_15880 | Transcriptional regulator, MarR family |
| 3127 | FUIE01000089.1 | SJM71239.1 | open | 645 [NA] | 214 [AA] | 11214-11858 | FM111_15885 | Probable intracellular septation protein |
| 3128 | FUIE01000089.1 | SJM71244.1 | open | 936 [NA] | 311 [AA] | 11864-12799 | FM111_15890 | Signal recognition particle receptor protein FtsY ( |