Genome Explorer: Rothia dentocariosa UMB0083 (SEQF6842.1)
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NCBI Annotation for SEQF6842.1
| Genome selected: Rothia dentocariosa UMB0083 | |||
| Contigs: | 11 | Bases: | 2494324 bps |
| CDS: | 44 | rRNA: | 7 |
| tmRNA: | 1 | tRNA: | 49 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | PKIR01000005.1 | PLA18021.1 | open | 1470 [NA] | 489 [AA] | 123749-125218 | CYK04_10525 | permease |
| 2002 | PKIR01000005.1 | PLA18022.1 | open | 882 [NA] | 293 [AA] | 125359-126240 | CYK04_10530 | CPBP family intramembrane metalloprotease |
| 2003 | PKIR01000005.1 | PLA18023.1 | open | 393 [NA] | 130 [AA] | 126325-126717 | CYK04_10535 | hypothetical protein |
| 2004 | PKIR01000005.1 | PLA18024.1 | open | 450 [NA] | 149 [AA] | 126714-127163 | CYK04_10540 | LytTR family transcriptional regulator |
| 2005 | PKIR01000005.1 | PLA18025.1 | open | 201 [NA] | 66 [AA] | 127218-127418 | CYK04_10545 | hypothetical protein |
| 2006 | PKIR01000005.1 | PLA18026.1 | open | 522 [NA] | 173 [AA] | 127681-128202 | CYK04_10550 | hypothetical protein |
| 2007 | PKIR01000005.1 | PLA18027.1 | open | 744 [NA] | 247 [AA] | 128227-128970 | CYK04_10555 | hypothetical protein |
| 2008 | PKIR01000005.1 | PLA18028.1 | open | 678 [NA] | 225 [AA] | 128963-129640 | CYK04_10560 | hypothetical protein |
| 2009 | PKIR01000005.1 | PLA18029.1 | open | 438 [NA] | 145 [AA] | 129661-130098 | CYK04_10565 | preprotein translocase subunit SecA |
| 2010 | PKIR01000005.1 | PLA18030.1 | open | 1428 [NA] | 475 [AA] | 130228-131655 | CYK04_10570 | FMN-dependent monooxygenase |
| 2011 | PKIR01000005.1 | PLA18031.1 | open | 1218 [NA] | 405 [AA] | 132098-133315 | CYK04_10575 | C4-dicarboxylate ABC transporter substrate-binding protein |
| 2012 | PKIR01000005.1 | PLA18032.1 | open | 1194 [NA] | 397 [AA] | 133649-134842 | CYK04_10580 | C4-dicarboxylate ABC transporter substrate-binding protein |
| 2013 | PKIR01000005.1 | PLA18033.1 | open | 1113 [NA] | 370 [AA] | 135427-136539 | CYK04_10585 | hypothetical protein |
| 2014 | PKIR01000005.1 | PLA18034.1 | open | 1752 [NA] | 583 [AA] | 139267-141018 | CYK04_10595 | MFS transporter |
| 2015 | PKIR01000005.1 | PLA18035.1 | open | 693 [NA] | 230 [AA] | 141255-141947 | CYK04_10600 | NAD-dependent dehydratase |
| 2016 | PKIR01000005.1 | PLA18036.1 | open | 318 [NA] | 105 [AA] | 142233-142550 | CYK04_10605 | acylphosphatase |
| 2017 | PKIR01000005.1 | PLA18037.1 | open | 1338 [NA] | 445 [AA] | 142735-144072 | CYK04_10610 | hypothetical protein |
| 2018 | PKIR01000005.1 | PLA18038.1 | open | 585 [NA] | 194 [AA] | 144190-144774 | CYK04_10615 | N-acetyltransferase |
| 2019 | PKIR01000005.1 | PLA18039.1 | open | 582 [NA] | 193 [AA] | 145019-145600 | CYK04_10620 | peroxiredoxin |
| 2020 | PKIR01000005.1 | PLA18040.1 | open | 531 [NA] | 176 [AA] | 145600-146130 | CYK04_10625 | alkyl hydroperoxide reductase |
| 2021 | PKIR01000005.1 | PLA18041.1 | open | 444 [NA] | 147 [AA] | 146261-146704 | CYK04_10630 | N-acetyltransferase |
| 2022 | PKIR01000005.1 | PLA18042.1 | open | 1641 [NA] | 546 [AA] | 147367-149007 | CYK04_10640 | mercury(II) reductase |
| 2023 | PKIR01000005.1 | PLA18043.1 | open | 618 [NA] | 205 [AA] | 152247-152864 | CYK04_10655 | L-alanine-DL-glutamate epimerase |
| 2024 | PKIR01000005.1 | PLA18044.1 | open | 801 [NA] | 266 [AA] | 153056-153856 | CYK04_10660 | hypothetical protein |
| 2025 | PKIR01000005.1 | PLA18045.1 | open | 435 [NA] | 144 [AA] | 154121-154555 | CYK04_10665 | SRPBCC domain-containing protein |
| 2026 | PKIR01000005.1 | PLA18046.1 | open | 504 [NA] | 167 [AA] | 154806-155309 | CYK04_10670 | CoA-binding protein |
| 2027 | PKIR01000005.1 | PLA18047.1 | open | 1479 [NA] | 492 [AA] | 155309-156787 | CYK04_10675 | O-acetylhomoserine aminocarboxypropyltransferase |
| 2028 | PKIR01000005.1 | PLA18048.1 | open | 891 [NA] | 296 [AA] | 156976-157866 | CYK04_10680 | DUF1963 domain-containing protein |
| 2029 | PKIR01000005.1 | PLA18049.1 | open | 837 [NA] | 278 [AA] | 158094-158930 | CYK04_10685 | DUF1963 domain-containing protein |
| 2030 | PKIR01000005.1 | PLA18050.1 | open | 1056 [NA] | 351 [AA] | 159125-160180 | CYK04_10690 | iron-siderophore ABC transporter substrate-binding protein |
| 2031 | PKIR01000005.1 | PLA18051.1 | open | 1206 [NA] | 401 [AA] | 160358-161563 | CYK04_10695 | iron ABC transporter permease |
| 2032 | PKIR01000005.1 | PLA18052.1 | open | 1083 [NA] | 360 [AA] | 161560-162642 | CYK04_10700 | enterobactin ABC transporter permease |
| 2033 | PKIR01000005.1 | PLA18053.1 | open | 741 [NA] | 246 [AA] | 162923-163663 | CYK04_10705 | hypothetical protein |
| 2034 | PKIR01000005.1 | PLA18054.1 | open | 2637 [NA] | 878 [AA] | 163735-166371 | CYK04_10710 | serine protease |
| 2035 | PKIR01000005.1 | PLA18055.1 | open | 1035 [NA] | 344 [AA] | 166633-167667 | CYK04_10715 | magnesium and cobalt transport protein CorA |
| 2036 | PKIR01000005.1 | PLA18056.1 | open | 492 [NA] | 163 [AA] | 167775-168266 | CYK04_10720 | DUF2087 domain-containing protein |
| 2037 | PKIR01000005.1 | PLA18057.1 | open | 570 [NA] | 189 [AA] | 168302-168871 | CYK04_10725 | hypothetical protein |
| 2038 | PKIR01000005.1 | PLA18058.1 | open | 189 [NA] | 62 [AA] | 168787->168977 | CYK04_10730 | hypothetical protein |
| 2039 | PKIR01000005.1 | PLA18059.1 | open | 1194 [NA] | 397 [AA] | 8847-10040 | CYK04_10070 | cystathionine gamma-synthase |
| 2040 | PKIR01000005.1 | PLA18060.1 | open | 750 [NA] | 249 [AA] | 10185-10934 | CYK04_10075 | dTMP kinase |
| 2041 | PKIR01000005.1 | PLA18061.1 | open | 2538 [NA] | 845 [AA] | 78507-81044 | CYK04_10345 | ATPase |
| 2042 | PKIR01000005.1 | PLA18062.1 | open | 2145 [NA] | 714 [AA] | 136947-139091 | CYK04_10590 | acetyl-coenzyme A synthetase |
| 2043 | PKIR01000005.1 | PLA18063.1 | open | 1164 [NA] | 387 [AA] | 150772-151935 | CYK04_10650 | MFS transporter permease |
| 2044 | PKIR01000006.1 | PLA17929.1 | open | 855 [NA] | 284 [AA] | 342-1196 | CYK04_10735 | 23S ribosomal RNA methyltransferase Erm |
| 2045 | PKIR01000006.1 | PLA17930.1 | open | 1179 [NA] | 392 [AA] | 1410-2588 | CYK04_10740 | IS256 family transposase |
| 2046 | PKIR01000007.1 | PLA17928.1 | open | 1920 [NA] | 639 [AA] | 195-2114 | CYK04_10745 | TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein |
| 2047 | PKIR01000008.1 | PLA17926.1 | open | 1311 [NA] | 436 [AA] | 8-1318 | CYK04_10750 | ISL3 family transposase |
| 2048 | PKIR01000008.1 | PLA17927.1 | open | 218 [NA] | 73 [AA] | 1220->1437 | CYK04_10755 | hypothetical protein |
| 2049 | PKIR01000009.1 | PLA17925.1 | open | 257 [NA] | 86 [AA] | <1-257 | CYK04_10760 | parapinopsin |
| 2050 | PKIR01000011.1 | PLA17924.1 | open | 384 [NA] | 128 [AA] | <1->385 | CYK04_10765 | recombinase RecJ |