Genome Explorer: Bordetella pertussis J121 (SEQF7931.1)
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NCBI Annotation for SEQF7931.1
| Genome selected: Bordetella pertussis J121 | |||
| Contigs: | 1 | Bases: | 4103084 bps |
| CDS: | 76 | rRNA: | 9 |
| tmRNA: | 0 | tRNA: | 51 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3501 | CP013891.1 | AQJ59041.1 | open | 1014 [NA] | 337 [AA] | 2077709-2078722 | AVS64_09905 | pyridoxamine 5'-phosphate oxidase |
| 3502 | CP013891.1 | AQJ59042.1 | open | 480 [NA] | 159 [AA] | 2089961-2090440 | AVS64_09970 | acetyltransferase |
| 3503 | CP013891.1 | AQJ59043.1 | open | 876 [NA] | 291 [AA] | 2102632-2103507 | AVS64_10045 | PhzF family phenazine biosynthesis protein |
| 3504 | CP013891.1 | AQJ59044.1 | open | 1521 [NA] | 506 [AA] | 2107494-2109014 | AVS64_10070 | aldehyde dehydrogenase |
| 3505 | CP013891.1 | AQJ59045.1 | open | 144 [NA] | 47 [AA] | 2121192-2121335 | AVS64_10130 | cbb3-type cytochrome oxidase maturation protein |
| 3506 | CP013891.1 | AQJ59046.1 | open | 501 [NA] | 166 [AA] | 2127678-2128178 | AVS64_10175 | GCN5 family acetyltransferase |
| 3507 | CP013891.1 | AQJ59047.1 | open | 1083 [NA] | 360 [AA] | 2129974-2131056 | AVS64_10190 | hypothetical protein |
| 3508 | CP013891.1 | AQJ59048.1 | open | 1158 [NA] | 385 [AA] | 2148663-2149820 | AVS64_10275 | outer membrane protein assembly factor BamB |
| 3509 | CP013891.1 | AQJ59049.1 | open | 375 [NA] | 124 [AA] | 2175279-2175653 | AVS64_10400 | hypothetical protein |
| 3510 | CP013891.1 | AQJ59050.1 | open | 1398 [NA] | 465 [AA] | 2254018-2255415 | AVS64_10785 | rRNA methyltransferase |
| 3511 | CP013891.1 | AQJ59051.1 | open | 1956 [NA] | 651 [AA] | 2280109-2282064 | AVS64_10895 | peptidylprolyl isomerase |
| 3512 | CP013891.1 | AQJ59052.1 | open | 636 [NA] | 211 [AA] | 2293752-2294387 | AVS64_10965 | glycerol-3-phosphate acyltransferase |
| 3513 | CP013891.1 | AQJ59053.1 | open | 1017 [NA] | 338 [AA] | 2294655-2295671 | AVS64_10970 | transposase |
| 3514 | CP013891.1 | AQJ59054.1 | open | 2712 [NA] | 903 [AA] | 2310775-2313486 | AVS64_11045 | autotransporter outer membrane beta-barrel domain-containing protein |
| 3515 | CP013891.1 | AQJ59055.1 | open | 699 [NA] | 232 [AA] | 2325056-2325754 | AVS64_11100 | hypothetical protein |
| 3516 | CP013891.1 | AQJ59056.1 | open | 267 [NA] | 88 [AA] | 2330598-2330864 | AVS64_11130 | type III secretion protein HrpO |
| 3517 | CP013891.1 | AQJ59057.1 | open | 1080 [NA] | 359 [AA] | 2331538-2332617 | AVS64_11140 | type III secretion system protein |
| 3518 | CP013891.1 | AQJ59058.1 | open | 564 [NA] | 187 [AA] | 2335007-2335570 | AVS64_11160 | type III secretion system protein |
| 3519 | CP013891.1 | AQJ59059.1 | open | 2100 [NA] | 699 [AA] | 2344554-2346653 | AVS64_11235 | Low calcium response locus protein D |
| 3520 | CP013891.1 | AQJ59060.1 | open | 291 [NA] | 96 [AA] | 2354855-2355145 | AVS64_11280 | hypothetical protein |
| 3521 | CP013891.1 | AQJ59061.1 | open | 1698 [NA] | 565 [AA] | 2359943-2361640 | AVS64_11310 | phosphonate ABC transporter permease |
| 3522 | CP013891.1 | AQJ59062.1 | open | 1530 [NA] | 509 [AA] | 2376293-2377822 | AVS64_11385 | DNA-binding protein |
| 3523 | CP013891.1 | AQJ59063.1 | open | 1014 [NA] | 337 [AA] | 2386190-2387203 | AVS64_11425 | acetylpolyamine aminohydrolase |
| 3524 | CP013891.1 | AQJ59064.1 | open | 1344 [NA] | 447 [AA] | 2393386-2394729 | AVS64_11455 | sodium:alanine symporter |
| 3525 | CP013891.1 | AQJ59065.1 | open | 588 [NA] | 195 [AA] | 2399540-2400127 | AVS64_11480 | nicotinate-nicotinamide nucleotide adenylyltransferase |
| 3526 | CP013891.1 | AQJ59066.1 | open | 900 [NA] | 299 [AA] | 2431707-2432606 | AVS64_11620 | aspartyl beta-hydroxylase |
| 3527 | CP013891.1 | AQJ59067.1 | open | 2472 [NA] | 823 [AA] | 2452375-2454846 | AVS64_11710 | ABC transporter permease |
| 3528 | CP013891.1 | AQJ59068.1 | open | 780 [NA] | 259 [AA] | 2465227-2466006 | AVS64_11775 | GntR family transcriptional regulator |
| 3529 | CP013891.1 | AQJ59069.1 | open | 423 [NA] | 140 [AA] | 2475222-2475644 | AVS64_11810 | hypothetical protein |
| 3530 | CP013891.1 | AQJ59070.1 | open | 858 [NA] | 285 [AA] | 2511066-2511923 | AVS64_11990 | permease |
| 3531 | CP013891.1 | AQJ59071.1 | open | 1539 [NA] | 512 [AA] | 2516032-2517570 | AVS64_12010 | propionate--CoA ligase |
| 3532 | CP013891.1 | AQJ59072.1 | open | 936 [NA] | 311 [AA] | 2530976-2531911 | AVS64_12080 | ABC transporter substrate-binding protein |
| 3533 | CP013891.1 | AQJ59073.1 | open | 1044 [NA] | 347 [AA] | 2533987-2535030 | AVS64_12095 | threonine synthase |
| 3534 | CP013891.1 | AQJ59074.1 | open | 240 [NA] | 79 [AA] | 2546645-2546884 | AVS64_12160 | acyl carrier protein |
| 3535 | CP013891.1 | AQJ59075.1 | open | 594 [NA] | 197 [AA] | 2551173-2551766 | AVS64_12190 | hypothetical protein |
| 3536 | CP013891.1 | AQJ59076.1 | open | 888 [NA] | 295 [AA] | 2604291-2605178 | AVS64_12435 | ATP-binding protein |
| 3537 | CP013891.1 | AQJ59077.1 | open | 243 [NA] | 80 [AA] | 2614916-2615158 | AVS64_12480 | hypothetical protein |
| 3538 | CP013891.1 | AQJ59078.1 | open | 420 [NA] | 139 [AA] | 2620156-2620575 | AVS64_12505 | Fur family transcriptional regulator |
| 3539 | CP013891.1 | AQJ59079.1 | open | 1437 [NA] | 478 [AA] | 2624299-2625735 | AVS64_12535 | hypothetical protein |
| 3540 | CP013891.1 | AQJ59080.1 | open | 846 [NA] | 281 [AA] | 2639362-2640207 | AVS64_12605 | pilus assembly protein |
| 3541 | CP013891.1 | AQJ59081.1 | open | 1185 [NA] | 394 [AA] | 2650298-2651482 | AVS64_12665 | heme biosynthesis operon protein HemX |
| 3542 | CP013891.1 | AQJ59082.1 | open | 1158 [NA] | 385 [AA] | 2674089-2675246 | AVS64_12775 | hypothetical protein |
| 3543 | CP013891.1 | AQJ59083.1 | open | 900 [NA] | 299 [AA] | 2678301-2679200 | AVS64_12795 | recombination-associated protein RdgC |
| 3544 | CP013891.1 | AQJ59084.1 | open | 258 [NA] | 85 [AA] | 2742351-2742608 | AVS64_13135 | XRE family transcriptional regulator |
| 3545 | CP013891.1 | AQJ59085.1 | open | 1089 [NA] | 362 [AA] | 2763725-2764813 | AVS64_13235 | ABC transporter ATP-binding protein |
| 3546 | CP013891.1 | AQJ59086.1 | open | 789 [NA] | 262 [AA] | 2766016-2766804 | AVS64_13245 | DeoR family transcriptional regulator |
| 3547 | CP013891.1 | AQJ59087.1 | open | 1020 [NA] | 339 [AA] | 2770144-2771163 | AVS64_13265 | hypothetical protein |
| 3548 | CP013891.1 | AQJ59088.1 | open | 789 [NA] | 262 [AA] | 2782808-2783596 | AVS64_13340 | class II aldolase |
| 3549 | CP013891.1 | AQJ59089.1 | open | 507 [NA] | 168 [AA] | 2811951-2812457 | AVS64_13435 | phenylacetate-CoA oxygenase subunit PaaJ |
| 3550 | CP013891.1 | AQJ59090.1 | open | 1422 [NA] | 473 [AA] | 2832537-2833958 | AVS64_13540 | argininosuccinate lyase |
| 3551 | CP013891.1 | AQJ59091.1 | open | 483 [NA] | 160 [AA] | 2839889-2840371 | AVS64_13575 | molybdenum cofactor biosynthesis protein MoaE |
| 3552 | CP013891.1 | AQJ59092.1 | open | 504 [NA] | 167 [AA] | 2846281-2846784 | AVS64_13605 | peroxiredoxin |
| 3553 | CP013891.1 | AQJ59093.1 | open | 1008 [NA] | 335 [AA] | 2849209-2850216 | AVS64_13620 | biotin synthase |
| 3554 | CP013891.1 | AQJ59094.1 | open | 1017 [NA] | 338 [AA] | 2851861-2852877 | AVS64_13635 | transposase |
| 3555 | CP013891.1 | AQJ59095.1 | open | 2001 [NA] | 666 [AA] | 2861457-2863457 | AVS64_13685 | cytochrome ubiquinol oxidase subunit I |
| 3556 | CP013891.1 | AQJ59096.1 | open | 2280 [NA] | 759 [AA] | 2871344-2873623 | AVS64_13725 | autotransporter outer membrane beta-barrel domain-containing protein |
| 3557 | CP013891.1 | AQJ59097.1 | open | 2169 [NA] | 722 [AA] | 2892790-2894958 | AVS64_13795 | penicillin-binding protein 1C |
| 3558 | CP013891.1 | AQJ59098.1 | open | 4566 [NA] | 1521 [AA] | 2894955-2899520 | AVS64_13800 | alpha-2-macroglobulin |
| 3559 | CP013891.1 | AQJ59099.1 | open | 831 [NA] | 276 [AA] | 2940675-2941505 | AVS64_14025 | IclR family transcriptional regulator |
| 3560 | CP013891.1 | AQJ59100.1 | open | 912 [NA] | 303 [AA] | 2968947-2969858 | AVS64_14155 | hypothetical protein |
| 3561 | CP013891.1 | AQJ59101.1 | open | 867 [NA] | 288 [AA] | 2971992-2972858 | AVS64_14175 | ABC transporter permease |
| 3562 | CP013891.1 | AQJ59102.1 | open | 741 [NA] | 246 [AA] | 2984885-2985625 | AVS64_14240 | oxidoreductase |
| 3563 | CP013891.1 | AQJ59103.1 | open | 1347 [NA] | 448 [AA] | 2998672-3000018 | AVS64_14310 | MFS transporter |
| 3564 | CP013891.1 | AQJ59104.1 | open | 858 [NA] | 285 [AA] | 3038977-3039834 | AVS64_14520 | ABC transporter permease |
| 3565 | CP013891.1 | AQJ59105.1 | open | 1167 [NA] | 388 [AA] | 3093072-3094238 | AVS64_14735 | chromate transporter |
| 3566 | CP013891.1 | AQJ59106.1 | open | 2199 [NA] | 732 [AA] | 3095722-3097920 | AVS64_14745 | TonB-dependent receptor |
| 3567 | CP013891.1 | AQJ59107.1 | open | 1980 [NA] | 659 [AA] | 3104294-3106273 | AVS64_14795 | cytochrome ubiquinol oxidase subunit I |
| 3568 | CP013891.1 | AQJ59108.1 | open | 1065 [NA] | 354 [AA] | 3114343-3115407 | AVS64_14840 | carnitine dehydratase |
| 3569 | CP013891.1 | AQJ59109.1 | open | 1125 [NA] | 374 [AA] | 3120586-3121710 | AVS64_14875 | diaminohydroxyphosphoribosylaminopyrimidine deaminase |
| 3570 | CP013891.1 | AQJ59110.1 | open | 429 [NA] | 142 [AA] | 3134336-3134764 | AVS64_14945 | 50S ribosomal protein L13 |
| 3571 | CP013891.1 | AQJ59111.1 | open | 1407 [NA] | 468 [AA] | 3150893-3152299 | AVS64_15020 | glutamate--tRNA ligase |
| 3572 | CP013891.1 | AQJ59112.1 | open | 942 [NA] | 313 [AA] | 3169444-3170385 | AVS64_15100 | sugar kinase |
| 3573 | CP013891.1 | AQJ59113.1 | open | 459 [NA] | 152 [AA] | 3183619-3184077 | AVS64_15175 | transcriptional regulator |
| 3574 | CP013891.1 | AQJ59114.1 | open | 429 [NA] | 142 [AA] | 3211183-3211611 | AVS64_15290 | division/cell wall cluster transcriptional repressor MraZ |
| 3575 | CP013891.1 | AQJ59115.1 | open | 477 [NA] | 158 [AA] | 3224406-3224882 | AVS64_15345 | AsnC family transcriptional regulator |
| 3576 | CP013891.1 | AQJ59116.1 | open | 306 [NA] | 101 [AA] | 3243441-3243746 | AVS64_15445 | RND transporter |
| 3577 | CP013891.1 | AQJ59117.1 | open | 939 [NA] | 312 [AA] | 3251831-3252769 | AVS64_15500 | nickel transporter |
| 3578 | CP013891.1 | AQJ59118.1 | open | 2064 [NA] | 687 [AA] | 3270833-3272896 | AVS64_15590 | lytic transglycosylase |
| 3579 | CP013891.1 | AQJ59119.1 | open | 1479 [NA] | 492 [AA] | 3279398-3280876 | AVS64_15620 | hypothetical protein |
| 3580 | CP013891.1 | AQJ59120.1 | open | 366 [NA] | 121 [AA] | 3286357-3286722 | AVS64_15665 | hypothetical protein |
| 3581 | CP013891.1 | AQJ59121.1 | open | 2757 [NA] | 918 [AA] | 3320361-3323117 | AVS64_15805 | restriction endonuclease |
| 3582 | CP013891.1 | AQJ59122.1 | open | 1896 [NA] | 631 [AA] | 3342236-3344131 | AVS64_15900 | sulfatase |
| 3583 | CP013891.1 | AQJ59123.1 | open | 432 [NA] | 143 [AA] | 3364607-3365038 | AVS64_15985 | peroxiredoxin |
| 3584 | CP013891.1 | AQJ59124.1 | open | 618 [NA] | 205 [AA] | 3383267-3383884 | AVS64_16070 | urease accessory protein UreJ |
| 3585 | CP013891.1 | AQJ59125.1 | open | 1017 [NA] | 338 [AA] | 3427285-3428301 | AVS64_16290 | transposase |
| 3586 | CP013891.1 | AQJ59126.1 | open | 1017 [NA] | 338 [AA] | 3441818-3442834 | AVS64_16360 | transposase |
| 3587 | CP013891.1 | AQJ59127.1 | open | 867 [NA] | 288 [AA] | 3445747-3446613 | AVS64_16380 | multidrug DMT transporter |
| 3588 | CP013891.1 | AQJ59128.1 | open | 1017 [NA] | 338 [AA] | 3460579-3461595 | AVS64_16425 | transposase |
| 3589 | CP013891.1 | AQJ59129.1 | open | 990 [NA] | 329 [AA] | 3462398-3463387 | AVS64_16435 | ABC transporter substrate-binding protein |
| 3590 | CP013891.1 | AQJ59130.1 | open | 1767 [NA] | 588 [AA] | 3492239-3494005 | AVS64_16590 | peptidase M61 |
| 3591 | CP013891.1 | AQJ59131.1 | open | 321 [NA] | 106 [AA] | 3497948-3498268 | AVS64_16615 | ABC transporter permease |
| 3592 | CP013891.1 | AQJ59132.1 | open | 885 [NA] | 294 [AA] | 3505379-3506263 | AVS64_16660 | hypothetical protein |
| 3593 | CP013891.1 | AQJ59133.1 | open | 624 [NA] | 207 [AA] | 3525964-3526587 | AVS64_16745 | TetR family transcriptional regulator |
| 3594 | CP013891.1 | AQJ59134.1 | open | 645 [NA] | 214 [AA] | 3550958-3551602 | AVS64_16870 | hypothetical protein |
| 3595 | CP013891.1 | AQJ59135.1 | open | 1287 [NA] | 428 [AA] | 3552098-3553384 | AVS64_16880 | hypothetical protein |
| 3596 | CP013891.1 | AQJ59136.1 | open | 231 [NA] | 76 [AA] | 3570212-3570442 | AVS64_16965 | hypothetical protein |
| 3597 | CP013891.1 | AQJ59137.1 | open | 390 [NA] | 129 [AA] | 3570569-3570958 | AVS64_16970 | hypothetical protein |
| 3598 | CP013891.1 | AQJ59138.1 | open | 981 [NA] | 326 [AA] | 3599415-3600395 | AVS64_17090 | oxidoreductase |
| 3599 | CP013891.1 | AQJ59139.1 | open | 945 [NA] | 314 [AA] | 3605895-3606839 | AVS64_17115 | LysR family transcriptional regulator |
| 3600 | CP013891.1 | AQJ59140.1 | open | 963 [NA] | 320 [AA] | 3617405-3618367 | AVS64_17165 | LysR family transcriptional regulator |
| 3601 | CP013891.1 | AQJ59141.1 | open | 615 [NA] | 204 [AA] | 3666955-3667569 | AVS64_17405 | hypothetical protein |
| 3602 | CP013891.1 | AQJ59142.1 | open | 585 [NA] | 194 [AA] | 3697592-3698176 | AVS64_17545 | hypothetical protein |
| 3603 | CP013891.1 | AQJ59143.1 | open | 777 [NA] | 258 [AA] | 3700339-3701115 | AVS64_17560 | aspartate dehydrogenase |
| 3604 | CP013891.1 | AQJ59144.1 | open | 486 [NA] | 161 [AA] | 3713886-3714371 | AVS64_17630 | AsnC family transcriptional regulator |
| 3605 | CP013891.1 | AQJ59145.1 | open | 126 [NA] | 41 [AA] | 3745010-3745135 | AVS64_17770 | hypothetical protein |
| 3606 | CP013891.1 | AQJ59146.1 | open | 972 [NA] | 323 [AA] | 3778031-3779002 | AVS64_17970 | ABC transporter substrate-binding protein |
| 3607 | CP013891.1 | AQJ59147.1 | open | 1608 [NA] | 535 [AA] | 3791212-3792819 | AVS64_18035 | methylcrotonoyl-CoA carboxylase |
| 3608 | CP013891.1 | AQJ59148.1 | open | 1842 [NA] | 613 [AA] | 3817396-3819237 | AVS64_18130 | acetolactate synthase |
| 3609 | CP013891.1 | AQJ59149.1 | open | 1017 [NA] | 338 [AA] | 3836240-3837256 | AVS64_18215 | transposase |
| 3610 | CP013891.1 | AQJ59150.1 | open | 894 [NA] | 297 [AA] | 3867817-3868710 | AVS64_18435 | hypothetical protein |
| 3611 | CP013891.1 | AQJ59151.1 | open | 501 [NA] | 166 [AA] | 3887526-3888026 | AVS64_18510 | single-stranded DNA-binding protein |
| 3612 | CP013891.1 | AQJ59152.1 | open | 504 [NA] | 167 [AA] | 3890419-3890922 | AVS64_18520 | hypothetical protein |
| 3613 | CP013891.1 | AQJ59153.1 | open | 834 [NA] | 277 [AA] | 3893627-3894460 | AVS64_18545 | transcriptional regulator |
| 3614 | CP013891.1 | AQJ59154.1 | open | 627 [NA] | 208 [AA] | 3935768-3936394 | AVS64_18755 | TetR family transcriptional regulator |
| 3615 | CP013891.1 | AQJ59155.1 | open | 780 [NA] | 259 [AA] | 3943715-3944494 | AVS64_18795 | hypothetical protein |
| 3616 | CP013891.1 | AQJ59156.1 | open | 1362 [NA] | 453 [AA] | 3947835-3949196 | AVS64_18815 | (Fe-S)-binding protein |
| 3617 | CP013891.1 | AQJ59157.1 | open | 222 [NA] | 73 [AA] | 3960057-3960278 | AVS64_18870 | hypothetical protein |
| 3618 | CP013891.1 | AQJ59158.1 | open | 888 [NA] | 295 [AA] | 3974088-3974975 | AVS64_18945 | RNA polymerase factor sigma-32 |
| 3619 | CP013891.1 | AQJ59159.1 | open | 246 [NA] | 81 [AA] | 3992902-3993147 | AVS64_19025 | BolA family transcriptional regulator |
| 3620 | CP013891.1 | AQJ59160.1 | open | 1125 [NA] | 374 [AA] | 4014502-4015626 | AVS64_19170 | type IV secretion protein G |
| 3621 | CP013891.1 | AQJ59161.1 | open | 645 [NA] | 214 [AA] | 4042653-4043297 | AVS64_19285 | dephospho-CoA kinase |
| 3622 | CP013891.1 | AQJ59162.1 | open | 1233 [NA] | 410 [AA] | 4075958-4077190 | AVS64_19445 | formyl-CoA transferase |
| 3623 | CP013891.1 | AQJ59163.1 | open | 1440 [NA] | 479 [AA] | 4078819-4080258 | AVS64_19460 | catalase |
| 3624 | CP013891.1 | AQJ59164.1 | open | 1377 [NA] | 458 [AA] | 4094949-4096325 | AVS64_19530 | histidine kinase |