Genome Explorer: Bordetella pertussis J019 (SEQF7940.1)
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NCBI Annotation for SEQF7940.1
| Genome selected: Bordetella pertussis J019 | |||
| Contigs: | 1 | Bases: | 4107558 bps |
| CDS: | 3634 | rRNA: | 9 |
| tmRNA: | 0 | tRNA: | 51 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3501 | CP011753.1 | AQG77742.1 | open | 723 [NA] | 240 [AA] | 2021400-2022122 | ABC46_09670 | NADPH-dependent FMN reductase |
| 3502 | CP011753.1 | AQG77743.1 | open | 351 [NA] | 116 [AA] | 2023752-2024102 | ABC46_09685 | ArsR family transcriptional regulator |
| 3503 | CP011753.1 | AQG77744.1 | open | 450 [NA] | 149 [AA] | 2039753-2040202 | ABC46_09770 | cytidine deaminase |
| 3504 | CP011753.1 | AQG77745.1 | open | 975 [NA] | 324 [AA] | 2113409-2114383 | ABC46_10055 | C4-dicarboxylate ABC transporter substrate-binding protein |
| 3505 | CP011753.1 | AQG77746.1 | open | 510 [NA] | 169 [AA] | 2133947-2134456 | ABC46_10145 | hypothetical protein |
| 3506 | CP011753.1 | AQG77747.1 | open | 1017 [NA] | 338 [AA] | 2142537-2143553 | ABC46_10190 | transposase |
| 3507 | CP011753.1 | AQG77748.1 | open | 795 [NA] | 264 [AA] | 2148520-2149314 | ABC46_10225 | hydrolase |
| 3508 | CP011753.1 | AQG77749.1 | open | 639 [NA] | 212 [AA] | 2150984-2151622 | ABC46_10240 | TetR family transcriptional regulator |
| 3509 | CP011753.1 | AQG77750.1 | open | 1119 [NA] | 372 [AA] | 2152698-2153816 | ABC46_10250 | ABC transporter substrate-binding protein |
| 3510 | CP011753.1 | AQG77751.1 | open | 294 [NA] | 97 [AA] | 2165513-2165806 | ABC46_10325 | ArsR family transcriptional regulator |
| 3511 | CP011753.1 | AQG77752.1 | open | 657 [NA] | 218 [AA] | 2176175-2176831 | ABC46_10375 | LuxR family transcriptional regulator |
| 3512 | CP011753.1 | AQG77753.1 | open | 1413 [NA] | 470 [AA] | 2176948-2178360 | ABC46_10380 | phosphoglucomutase |
| 3513 | CP011753.1 | AQG77754.1 | open | 519 [NA] | 172 [AA] | 2199880-2200398 | ABC46_10465 | MarR family transcriptional regulator |
| 3514 | CP011753.1 | AQG77755.1 | open | 435 [NA] | 144 [AA] | 2207129-2207563 | ABC46_10500 | hypothetical protein |
| 3515 | CP011753.1 | AQG77756.1 | open | 705 [NA] | 234 [AA] | 2221326-2222030 | ABC46_10570 | RNA polymerase sigma factor |
| 3516 | CP011753.1 | AQG77757.1 | open | 570 [NA] | 189 [AA] | 2222177-2222746 | ABC46_10575 | ferritin |
| 3517 | CP011753.1 | AQG77758.1 | open | 528 [NA] | 175 [AA] | 2240598-2241125 | ABC46_10650 | exonuclease |
| 3518 | CP011753.1 | AQG77759.1 | open | 1158 [NA] | 385 [AA] | 2267523-2268680 | ABC46_10785 | transporter |
| 3519 | CP011753.1 | AQG77760.1 | open | 1152 [NA] | 383 [AA] | 2275079-2276230 | ABC46_10825 | transporter |
| 3520 | CP011753.1 | AQG77761.1 | open | 807 [NA] | 268 [AA] | 2294348-2295154 | ABC46_10915 | ModE family transcriptional regulator |
| 3521 | CP011753.1 | AQG77762.1 | open | 624 [NA] | 207 [AA] | 2312944-2313567 | ABC46_10995 | hypothetical protein |
| 3522 | CP011753.1 | AQG77763.1 | open | 795 [NA] | 264 [AA] | 2340698-2341492 | ABC46_11135 | oxidoreductase |
| 3523 | CP011753.1 | AQG77764.1 | open | 1017 [NA] | 338 [AA] | 2351039-2352055 | ABC46_11190 | transposase |
| 3524 | CP011753.1 | AQG77765.1 | open | 1014 [NA] | 337 [AA] | 2354035-2355048 | ABC46_11205 | pyridoxamine 5'-phosphate oxidase |
| 3525 | CP011753.1 | AQG77766.1 | open | 480 [NA] | 159 [AA] | 2366287-2366766 | ABC46_11270 | acetyltransferase |
| 3526 | CP011753.1 | AQG77767.1 | open | 594 [NA] | 197 [AA] | 2369844-2370437 | ABC46_11285 | lipoprotein |
| 3527 | CP011753.1 | AQG77768.1 | open | 876 [NA] | 291 [AA] | 2378958-2379833 | ABC46_11345 | PhzF family phenazine biosynthesis protein |
| 3528 | CP011753.1 | AQG77769.1 | open | 1521 [NA] | 506 [AA] | 2383820-2385340 | ABC46_11370 | aldehyde dehydrogenase |
| 3529 | CP011753.1 | AQG77770.1 | open | 144 [NA] | 47 [AA] | 2397518-2397661 | ABC46_11430 | membrane protein |
| 3530 | CP011753.1 | AQG77771.1 | open | 501 [NA] | 166 [AA] | 2404004-2404504 | ABC46_11475 | GCN5 family acetyltransferase |
| 3531 | CP011753.1 | AQG77772.1 | open | 1083 [NA] | 360 [AA] | 2406300-2407382 | ABC46_11490 | membrane protein |
| 3532 | CP011753.1 | AQG77773.1 | open | 1158 [NA] | 385 [AA] | 2426038-2427195 | ABC46_11580 | quinoprotein |
| 3533 | CP011753.1 | AQG77774.1 | open | 1296 [NA] | 431 [AA] | 2427841-2429136 | ABC46_11590 | histidine--tRNA ligase |
| 3534 | CP011753.1 | AQG77775.1 | open | 375 [NA] | 124 [AA] | 2452654-2453028 | ABC46_11705 | hypothetical protein |
| 3535 | CP011753.1 | AQG77776.1 | open | 852 [NA] | 283 [AA] | 2459867-2460718 | ABC46_11735 | peptide ABC transporter permease |
| 3536 | CP011753.1 | AQG77777.1 | open | 1398 [NA] | 465 [AA] | 2531393-2532790 | ABC46_12090 | rRNA methyltransferase |
| 3537 | CP011753.1 | AQG77778.1 | open | 1956 [NA] | 651 [AA] | 2558533-2560488 | ABC46_12205 | peptidylprolyl isomerase |
| 3538 | CP011753.1 | AQG77779.1 | open | 636 [NA] | 211 [AA] | 2572176-2572811 | ABC46_12275 | glycerol-3-phosphate acyltransferase |
| 3539 | CP011753.1 | AQG77780.1 | open | 1017 [NA] | 338 [AA] | 2573079-2574095 | ABC46_12280 | transposase |
| 3540 | CP011753.1 | AQG77781.1 | open | 2712 [NA] | 903 [AA] | 2589199-2591910 | ABC46_12355 | autotransporter |
| 3541 | CP011753.1 | AQG77782.1 | open | 699 [NA] | 232 [AA] | 2603480-2604178 | ABC46_12410 | hypothetical protein |
| 3542 | CP011753.1 | AQG77783.1 | open | 267 [NA] | 88 [AA] | 2609022-2609288 | ABC46_12440 | type III secretion protein HrpO |
| 3543 | CP011753.1 | AQG77784.1 | open | 1080 [NA] | 359 [AA] | 2609962-2611041 | ABC46_12450 | type III secretion system protein |
| 3544 | CP011753.1 | AQG77785.1 | open | 564 [NA] | 187 [AA] | 2613431-2613994 | ABC46_12470 | type III secretion system protein |
| 3545 | CP011753.1 | AQG77786.1 | open | 2100 [NA] | 699 [AA] | 2622978-2625077 | ABC46_12545 | Low calcium response locus protein D |
| 3546 | CP011753.1 | AQG77787.1 | open | 291 [NA] | 96 [AA] | 2633279-2633569 | ABC46_12590 | hypothetical protein |
| 3547 | CP011753.1 | AQG77788.1 | open | 1698 [NA] | 565 [AA] | 2638367-2640064 | ABC46_12620 | phosphonate ABC transporter permease |
| 3548 | CP011753.1 | AQG77789.1 | open | 1530 [NA] | 509 [AA] | 2654717-2656246 | ABC46_12695 | DNA-binding protein |
| 3549 | CP011753.1 | AQG77790.1 | open | 1014 [NA] | 337 [AA] | 2664614-2665627 | ABC46_12735 | acetylpolyamine aminohydrolase |
| 3550 | CP011753.1 | AQG77791.1 | open | 1344 [NA] | 447 [AA] | 2671810-2673153 | ABC46_12765 | sodium:alanine symporter |
| 3551 | CP011753.1 | AQG77792.1 | open | 588 [NA] | 195 [AA] | 2677964-2678551 | ABC46_12790 | nicotinate-nucleotide adenylyltransferase |
| 3552 | CP011753.1 | AQG77793.1 | open | 900 [NA] | 299 [AA] | 2710131-2711030 | ABC46_12925 | aspartyl beta-hydroxylase |
| 3553 | CP011753.1 | AQG77794.1 | open | 2472 [NA] | 823 [AA] | 2730799-2733270 | ABC46_13015 | ABC transporter permease |
| 3554 | CP011753.1 | AQG77795.1 | open | 507 [NA] | 168 [AA] | 2745816-2746322 | ABC46_13080 | phenylacetate-CoA oxygenase |
| 3555 | CP011753.1 | AQG77796.1 | open | 1422 [NA] | 473 [AA] | 2766402-2767823 | ABC46_13185 | argininosuccinate lyase |
| 3556 | CP011753.1 | AQG77797.1 | open | 483 [NA] | 160 [AA] | 2773754-2774236 | ABC46_13220 | molybdenum cofactor biosynthesis protein MoaE |
| 3557 | CP011753.1 | AQG77798.1 | open | 504 [NA] | 167 [AA] | 2780146-2780649 | ABC46_13250 | peroxiredoxin |
| 3558 | CP011753.1 | AQG77799.1 | open | 1008 [NA] | 335 [AA] | 2783074-2784081 | ABC46_13265 | biotin synthase |
| 3559 | CP011753.1 | AQG77800.1 | open | 1017 [NA] | 338 [AA] | 2785726-2786742 | ABC46_13280 | transposase |
| 3560 | CP011753.1 | AQG77801.1 | open | 2001 [NA] | 666 [AA] | 2795322-2797322 | ABC46_13330 | cytochrome o ubiquinol oxidase subunit I |
| 3561 | CP011753.1 | AQG77802.1 | open | 2169 [NA] | 722 [AA] | 2826657-2828825 | ABC46_13445 | penicillin-binding protein |
| 3562 | CP011753.1 | AQG77803.1 | open | 4566 [NA] | 1521 [AA] | 2828822-2833387 | ABC46_13450 | alpha-2-macroglobulin |
| 3563 | CP011753.1 | AQG77804.1 | open | 831 [NA] | 276 [AA] | 2874542-2875372 | ABC46_13675 | IclR family transcriptional regulator |
| 3564 | CP011753.1 | AQG77805.1 | open | 912 [NA] | 303 [AA] | 2902814-2903725 | ABC46_13805 | hypothetical protein |
| 3565 | CP011753.1 | AQG77806.1 | open | 867 [NA] | 288 [AA] | 2905859-2906725 | ABC46_13825 | ABC transporter permease |
| 3566 | CP011753.1 | AQG77807.1 | open | 741 [NA] | 246 [AA] | 2918752-2919492 | ABC46_13890 | oxidoreductase |
| 3567 | CP011753.1 | AQG77808.1 | open | 1347 [NA] | 448 [AA] | 2932539-2933885 | ABC46_13960 | MFS transporter |
| 3568 | CP011753.1 | AQG77809.1 | open | 858 [NA] | 285 [AA] | 2972844-2973701 | ABC46_14170 | ABC transporter permease |
| 3569 | CP011753.1 | AQG77810.1 | open | 1167 [NA] | 388 [AA] | 3026939-3028105 | ABC46_14385 | chromate transporter |
| 3570 | CP011753.1 | AQG77811.1 | open | 2199 [NA] | 732 [AA] | 3029589-3031787 | ABC46_14395 | TonB-dependent receptor |
| 3571 | CP011753.1 | AQG77812.1 | open | 1980 [NA] | 659 [AA] | 3038161-3040140 | ABC46_14445 | cytochrome o ubiquinol oxidase subunit I |
| 3572 | CP011753.1 | AQG77813.1 | open | 1125 [NA] | 374 [AA] | 3054453-3055577 | ABC46_14525 | diaminohydroxyphosphoribosylaminopyrimidine deaminase |
| 3573 | CP011753.1 | AQG77814.1 | open | 429 [NA] | 142 [AA] | 3068203-3068631 | ABC46_14595 | 50S ribosomal protein L13 |
| 3574 | CP011753.1 | AQG77815.1 | open | 1407 [NA] | 468 [AA] | 3084760-3086166 | ABC46_14670 | glutamyl-tRNA synthetase |
| 3575 | CP011753.1 | AQG77816.1 | open | 942 [NA] | 313 [AA] | 3103311-3104252 | ABC46_14750 | sugar kinase |
| 3576 | CP011753.1 | AQG77817.1 | open | 459 [NA] | 152 [AA] | 3117486-3117944 | ABC46_14825 | transcriptional regulator |
| 3577 | CP011753.1 | AQG77818.1 | open | 987 [NA] | 328 [AA] | 3125586-3126572 | ABC46_14860 | peptidase M23 |
| 3578 | CP011753.1 | AQG77819.1 | open | 477 [NA] | 158 [AA] | 3158273-3158749 | ABC46_14995 | AsnC family transcriptional regulator |
| 3579 | CP011753.1 | AQG77820.1 | open | 1017 [NA] | 338 [AA] | 3190757-3191773 | ABC46_15160 | transposase |
| 3580 | CP011753.1 | AQG77821.1 | open | 2049 [NA] | 682 [AA] | 3203898-3205946 | ABC46_15210 | hydantoinase |
| 3581 | CP011753.1 | AQG77822.1 | open | 453 [NA] | 150 [AA] | 3206880-3207332 | ABC46_15220 | azurin |
| 3582 | CP011753.1 | AQG77823.1 | open | 600 [NA] | 199 [AA] | 3221962-3222561 | ABC46_15290 | TetR family transcriptional regulator |
| 3583 | CP011753.1 | AQG77824.1 | open | 621 [NA] | 206 [AA] | 3226093-3226713 | ABC46_15315 | NADH dehydrogenase |
| 3584 | CP011753.1 | AQG77825.1 | open | 1725 [NA] | 574 [AA] | 3246570-3248294 | ABC46_15400 | acetolactate synthase catalytic subunit |
| 3585 | CP011753.1 | AQG77826.1 | open | 894 [NA] | 297 [AA] | 3262917-3263810 | ABC46_15460 | mechanosensitive ion channel protein |
| 3586 | CP011753.1 | AQG77827.1 | open | 1098 [NA] | 365 [AA] | 3266734-3267831 | ABC46_15475 | hypothetical protein |
| 3587 | CP011753.1 | AQG77828.1 | open | 636 [NA] | 211 [AA] | 3273431-3274066 | ABC46_15505 | GntR family transcriptional regulator |
| 3588 | CP011753.1 | AQG77829.1 | open | 180 [NA] | 59 [AA] | 3295815-3295994 | ABC46_15590 | hypothetical protein |
| 3589 | CP011753.1 | AQG77830.1 | open | 348 [NA] | 115 [AA] | 3315496-3315843 | ABC46_15680 | XRE family transcriptional regulator |
| 3590 | CP011753.1 | AQG77831.1 | open | 2445 [NA] | 814 [AA] | 3320990-3323434 | ABC46_15705 | ligand-gated channel |
| 3591 | CP011753.1 | AQG77832.1 | open | 1041 [NA] | 346 [AA] | 3344262-3345302 | ABC46_15815 | aminoglycoside phosphotransferase |
| 3592 | CP011753.1 | AQG77833.1 | open | 612 [NA] | 203 [AA] | 3397153-3397764 | ABC46_16125 | repressor |
| 3593 | CP011753.1 | AQG77834.1 | open | 756 [NA] | 251 [AA] | 3406991-3407746 | ABC46_16180 | hypothetical protein |
| 3594 | CP011753.1 | AQG77835.1 | open | 942 [NA] | 313 [AA] | 3425974-3426915 | ABC46_16275 | integrase |
| 3595 | CP011753.1 | AQG77836.1 | open | 873 [NA] | 290 [AA] | 3429419-3430291 | ABC46_16290 | membrane protein |
| 3596 | CP011753.1 | AQG77837.1 | open | 1353 [NA] | 450 [AA] | 3437135-3438487 | ABC46_16335 | ATP-dependent RNA helicase |
| 3597 | CP011753.1 | AQG77838.1 | open | 726 [NA] | 241 [AA] | 3450537-3451262 | ABC46_16385 | arginyl-tRNA-protein transferase |
| 3598 | CP011753.1 | AQG77839.1 | open | 402 [NA] | 133 [AA] | 3453671-3454072 | ABC46_16400 | membrane protein |
| 3599 | CP011753.1 | AQG77840.1 | open | 324 [NA] | 107 [AA] | 3517674-3517997 | ABC46_16720 | hypothetical protein |
| 3600 | CP011753.1 | AQG77841.1 | open | 291 [NA] | 96 [AA] | 3547686-3547976 | ABC46_16880 | hypothetical protein |
| 3601 | CP011753.1 | AQG77842.1 | open | 765 [NA] | 254 [AA] | 3553366-3554130 | ABC46_16915 | GntR family transcriptional regulator |
| 3602 | CP011753.1 | AQG77843.1 | open | 1260 [NA] | 419 [AA] | 3555139-3556398 | ABC46_16925 | transporter |
| 3603 | CP011753.1 | AQG77844.1 | open | 717 [NA] | 238 [AA] | 3559278-3559994 | ABC46_16950 | hypothetical protein |
| 3604 | CP011753.1 | AQG77845.1 | open | 1176 [NA] | 391 [AA] | 3590784-3591959 | ABC46_17100 | nicotinate phosphoribosyltransferase |
| 3605 | CP011753.1 | AQG77846.1 | open | 225 [NA] | 74 [AA] | 3615989-3616213 | ABC46_17210 | hypothetical protein |
| 3606 | CP011753.1 | AQG77847.1 | open | 918 [NA] | 305 [AA] | 3635623-3636540 | ABC46_17300 | LysR family transcriptional regulator |
| 3607 | CP011753.1 | AQG77848.1 | open | 1401 [NA] | 466 [AA] | 3642968-3644368 | ABC46_17335 | GntR family transcriptional regulator |
| 3608 | CP011753.1 | AQG77849.1 | open | 1314 [NA] | 437 [AA] | 3651221-3652534 | ABC46_17380 | short-chain fatty acid transporter |
| 3609 | CP011753.1 | AQG77850.1 | open | 939 [NA] | 312 [AA] | 3665316-3666254 | ABC46_17445 | hypothetical protein |
| 3610 | CP011753.1 | AQG77851.1 | open | 954 [NA] | 317 [AA] | 3676526-3677479 | ABC46_17495 | thioredoxin reductase |
| 3611 | CP011753.1 | AQG77852.1 | open | 594 [NA] | 197 [AA] | 3688841-3689434 | ABC46_17565 | phosphoheptose isomerase |
| 3612 | CP011753.1 | AQG77853.1 | open | 945 [NA] | 314 [AA] | 3731426-3732370 | ABC46_17780 | iron ABC transporter |
| 3613 | CP011753.1 | AQG77854.1 | open | 366 [NA] | 121 [AA] | 3745888-3746253 | ABC46_17865 | hypothetical protein |
| 3614 | CP011753.1 | AQG77855.1 | open | 606 [NA] | 201 [AA] | 3753586-3754191 | ABC46_17910 | hypothetical protein |
| 3615 | CP011753.1 | AQG77856.1 | open | 165 [NA] | 54 [AA] | 3754279-3754443 | ABC46_17915 | rubredoxin |
| 3616 | CP011753.1 | AQG77857.1 | open | 642 [NA] | 213 [AA] | 3794197-3794838 | ABC46_18110 | ubiquinol-cytochrome C reductase |
| 3617 | CP011753.1 | AQG77858.1 | open | 849 [NA] | 282 [AA] | 3796311-3797159 | ABC46_18120 | cytochrome C |
| 3618 | CP011753.1 | AQG77859.1 | open | 621 [NA] | 206 [AA] | 3823347-3823967 | ABC46_18265 | membrane protein |
| 3619 | CP011753.1 | AQG77860.1 | open | 783 [NA] | 260 [AA] | 3865578-3866360 | ABC46_18440 | IclR family transcriptional regulator |
| 3620 | CP011753.1 | AQG77861.1 | open | 1041 [NA] | 346 [AA] | 3869374-3870414 | ABC46_18470 | cyclase |
| 3621 | CP011753.1 | AQG77862.1 | open | 450 [NA] | 149 [AA] | 3886984-3887433 | ABC46_18545 | hypothetical protein |
| 3622 | CP011753.1 | AQG77863.1 | open | 477 [NA] | 158 [AA] | 3903490-3903966 | ABC46_18620 | bacterioferritin |
| 3623 | CP011753.1 | AQG77864.1 | open | 933 [NA] | 310 [AA] | 3931779-3932711 | ABC46_18770 | lipase |
| 3624 | CP011753.1 | AQG77865.1 | open | 612 [NA] | 203 [AA] | 3950850-3951461 | ABC46_18845 | hypothetical protein |
| 3625 | CP011753.1 | AQG77866.1 | open | 222 [NA] | 73 [AA] | 3963482-3963703 | ABC46_18910 | hypothetical protein |
| 3626 | CP011753.1 | AQG77867.1 | open | 246 [NA] | 81 [AA] | 3996327-3996572 | ABC46_19065 | BolA family transcriptional regulator |
| 3627 | CP011753.1 | AQG77868.1 | open | 261 [NA] | 86 [AA] | 4011803-4012063 | ABC46_19175 | type IV secretion protein VirB2 |
| 3628 | CP011753.1 | AQG77869.1 | open | 819 [NA] | 272 [AA] | 4017128-4017946 | ABC46_19205 | type IV secretion protein F |
| 3629 | CP011753.1 | AQG77870.1 | open | 1125 [NA] | 374 [AA] | 4017927-4019051 | ABC46_19210 | type IV secretion protein G |
| 3630 | CP011753.1 | AQG77871.1 | open | 645 [NA] | 214 [AA] | 4047127-4047771 | ABC46_19330 | dephospho-CoA kinase |
| 3631 | CP011753.1 | AQG77872.1 | open | 1068 [NA] | 355 [AA] | 4067655-4068722 | ABC46_19425 | adenine glycosylase |
| 3632 | CP011753.1 | AQG77873.1 | open | 939 [NA] | 312 [AA] | 4071511-4072449 | ABC46_19445 | acetyl-CoA acetyltransferase |
| 3633 | CP011753.1 | AQG77874.1 | open | 1233 [NA] | 410 [AA] | 4080432-4081664 | ABC46_19490 | formyl-CoA transferase |
| 3634 | CP011753.1 | AQG77875.1 | open | 1377 [NA] | 458 [AA] | 4099423-4100799 | ABC46_19575 | histidine kinase |