Genome Explorer: Bordetella pertussis H784 (SEQF7949.1)
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NCBI Annotation for SEQF7949.1
| Genome selected: Bordetella pertussis H784 | |||
| Contigs: | 1 | Bases: | 4106396 bps |
| CDS: | 3633 | rRNA: | 9 |
| tmRNA: | 0 | tRNA: | 51 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3501 | CP011193.1 | AQB97495.1 | open | 2100 [NA] | 699 [AA] | 1993909-1996008 | WU27_09615 | Low calcium response locus protein D |
| 3502 | CP011193.1 | AQB97496.1 | open | 291 [NA] | 96 [AA] | 2004210-2004500 | WU27_09660 | hypothetical protein |
| 3503 | CP011193.1 | AQB97497.1 | open | 1698 [NA] | 565 [AA] | 2009298-2010995 | WU27_09690 | phosphonate ABC transporter permease |
| 3504 | CP011193.1 | AQB97498.1 | open | 1530 [NA] | 509 [AA] | 2025648-2027177 | WU27_09765 | DNA-binding protein |
| 3505 | CP011193.1 | AQB97499.1 | open | 1632 [NA] | 543 [AA] | 2031157-2032788 | WU27_09785 | ABC transporter ATP-binding protein |
| 3506 | CP011193.1 | AQB97500.1 | open | 1014 [NA] | 337 [AA] | 2035545-2036558 | WU27_09805 | acetylpolyamine aminohydrolase |
| 3507 | CP011193.1 | AQB97501.1 | open | 1344 [NA] | 447 [AA] | 2042741-2044084 | WU27_09835 | sodium:alanine symporter |
| 3508 | CP011193.1 | AQB97502.1 | open | 588 [NA] | 195 [AA] | 2048895-2049482 | WU27_09860 | nicotinate-nucleotide adenylyltransferase |
| 3509 | CP011193.1 | AQB97503.1 | open | 528 [NA] | 175 [AA] | 2070670-2071197 | WU27_09970 | exonuclease |
| 3510 | CP011193.1 | AQB97504.1 | open | 738 [NA] | 245 [AA] | 2084545-2085282 | WU27_10020 | aromatic ring-opening dioxygenase LigB |
| 3511 | CP011193.1 | AQB97505.1 | open | 705 [NA] | 234 [AA] | 2089764-2090468 | WU27_10050 | RNA polymerase sigma factor |
| 3512 | CP011193.1 | AQB97506.1 | open | 435 [NA] | 144 [AA] | 2104231-2104665 | WU27_10120 | hypothetical protein |
| 3513 | CP011193.1 | AQB97507.1 | open | 519 [NA] | 172 [AA] | 2111396-2111914 | WU27_10155 | MarR family transcriptional regulator |
| 3514 | CP011193.1 | AQB97508.1 | open | 1413 [NA] | 470 [AA] | 2133434-2134846 | WU27_10240 | phosphoglucomutase |
| 3515 | CP011193.1 | AQB97509.1 | open | 657 [NA] | 218 [AA] | 2134963-2135619 | WU27_10245 | LuxR family transcriptional regulator |
| 3516 | CP011193.1 | AQB97510.1 | open | 294 [NA] | 97 [AA] | 2145988-2146281 | WU27_10295 | ArsR family transcriptional regulator |
| 3517 | CP011193.1 | AQB97511.1 | open | 1119 [NA] | 372 [AA] | 2157978-2159096 | WU27_10370 | ABC transporter substrate-binding protein |
| 3518 | CP011193.1 | AQB97512.1 | open | 795 [NA] | 264 [AA] | 2162480-2163274 | WU27_10395 | hydrolase |
| 3519 | CP011193.1 | AQB97513.1 | open | 510 [NA] | 169 [AA] | 2177338-2177847 | WU27_10475 | hypothetical protein |
| 3520 | CP011193.1 | AQB97514.1 | open | 975 [NA] | 324 [AA] | 2197411-2198385 | WU27_10565 | C4-dicarboxylate ABC transporter substrate-binding protein |
| 3521 | CP011193.1 | AQB97515.1 | open | 1290 [NA] | 429 [AA] | 2239466-2240755 | WU27_10700 | glutamate dehydrogenase |
| 3522 | CP011193.1 | AQB97516.1 | open | 450 [NA] | 149 [AA] | 2270543-2270992 | WU27_10845 | cytidine deaminase |
| 3523 | CP011193.1 | AQB97517.1 | open | 723 [NA] | 240 [AA] | 2288623-2289345 | WU27_10945 | NADPH-dependent FMN reductase |
| 3524 | CP011193.1 | AQB97518.1 | open | 963 [NA] | 320 [AA] | 2292416-2293378 | WU27_10970 | hypothetical protein |
| 3525 | CP011193.1 | AQB97519.1 | open | 624 [NA] | 207 [AA] | 2303339-2303962 | WU27_11025 | glutathione S-transferase |
| 3526 | CP011193.1 | AQB97520.1 | open | 1035 [NA] | 344 [AA] | 2314559-2315593 | WU27_11075 | haloacid dehalogenase |
| 3527 | CP011193.1 | AQB97521.1 | open | 1515 [NA] | 504 [AA] | 2316939-2318453 | WU27_11085 | hypothetical protein |
| 3528 | CP011193.1 | AQB97522.1 | open | 1011 [NA] | 336 [AA] | 2318444-2319454 | WU27_11090 | membrane protein |
| 3529 | CP011193.1 | AQB97523.1 | open | 426 [NA] | 141 [AA] | 2350119-2350544 | WU27_11230 | hypothetical protein |
| 3530 | CP011193.1 | AQB97524.1 | open | 501 [NA] | 166 [AA] | 2355102-2355602 | WU27_11245 | ferritin |
| 3531 | CP011193.1 | AQB97525.1 | open | 642 [NA] | 213 [AA] | 2382633-2383274 | WU27_11360 | nucleoside-triphosphate diphosphatase |
| 3532 | CP011193.1 | AQB97526.1 | open | 2598 [NA] | 865 [AA] | 2409323-2411920 | WU27_11500 | DNA mismatch repair protein MutS |
| 3533 | CP011193.1 | AQB97527.1 | open | 558 [NA] | 185 [AA] | 2413671-2414228 | WU27_11515 | antibiotic biosynthesis monooxygenase |
| 3534 | CP011193.1 | AQB97528.1 | open | 537 [NA] | 178 [AA] | 2422111-2422647 | WU27_11555 | hypothetical protein |
| 3535 | CP011193.1 | AQB97529.1 | open | 2091 [NA] | 696 [AA] | 2425559-2427649 | WU27_11580 | DNA polymerase III subunit gamma/tau |
| 3536 | CP011193.1 | AQB97530.1 | open | 489 [NA] | 162 [AA] | 2439960-2440448 | WU27_11625 | membrane protein |
| 3537 | CP011193.1 | AQB97531.1 | open | 681 [NA] | 226 [AA] | 2480798-2481478 | WU27_11840 | chemotaxis protein CheY |
| 3538 | CP011193.1 | AQB97532.1 | open | 888 [NA] | 295 [AA] | 2536619-2537506 | WU27_12100 | ATP-binding protein |
| 3539 | CP011193.1 | AQB97533.1 | open | 243 [NA] | 80 [AA] | 2547244-2547486 | WU27_12145 | hypothetical protein |
| 3540 | CP011193.1 | AQB97534.1 | open | 420 [NA] | 139 [AA] | 2552484-2552903 | WU27_12170 | Fur family transcriptional regulator |
| 3541 | CP011193.1 | AQB97535.1 | open | 1437 [NA] | 478 [AA] | 2556627-2558063 | WU27_12200 | hypothetical protein |
| 3542 | CP011193.1 | AQB97536.1 | open | 846 [NA] | 281 [AA] | 2571690-2572535 | WU27_12270 | pilus assembly protein |
| 3543 | CP011193.1 | AQB97537.1 | open | 1185 [NA] | 394 [AA] | 2582626-2583810 | WU27_12330 | uroporphyrin-III methyltransferase |
| 3544 | CP011193.1 | AQB97538.1 | open | 1140 [NA] | 379 [AA] | 2606417-2607556 | WU27_12445 | hypothetical protein |
| 3545 | CP011193.1 | AQB97539.1 | open | 900 [NA] | 299 [AA] | 2610629-2611528 | WU27_12465 | recombinase RdgC |
| 3546 | CP011193.1 | AQB97540.1 | open | 258 [NA] | 85 [AA] | 2674679-2674936 | WU27_12805 | XRE family transcriptional regulator |
| 3547 | CP011193.1 | AQB97541.1 | open | 1089 [NA] | 362 [AA] | 2696054-2697142 | WU27_12905 | ABC transporter ATP-binding protein |
| 3548 | CP011193.1 | AQB97542.1 | open | 789 [NA] | 262 [AA] | 2698345-2699133 | WU27_12915 | DeoR faimly transcriptional regulator |
| 3549 | CP011193.1 | AQB97543.1 | open | 1020 [NA] | 339 [AA] | 2702473-2703492 | WU27_12935 | hypothetical protein |
| 3550 | CP011193.1 | AQB97544.1 | open | 789 [NA] | 262 [AA] | 2715137-2715925 | WU27_13010 | aldolase |
| 3551 | CP011193.1 | AQB97545.1 | open | 507 [NA] | 168 [AA] | 2744281-2744787 | WU27_13105 | phenylacetate-CoA oxygenase |
| 3552 | CP011193.1 | AQB97546.1 | open | 1422 [NA] | 473 [AA] | 2764867-2766288 | WU27_13210 | argininosuccinate lyase |
| 3553 | CP011193.1 | AQB97547.1 | open | 483 [NA] | 160 [AA] | 2772219-2772701 | WU27_13245 | molybdenum cofactor biosynthesis protein MoaE |
| 3554 | CP011193.1 | AQB97548.1 | open | 504 [NA] | 167 [AA] | 2778611-2779114 | WU27_13275 | peroxiredoxin |
| 3555 | CP011193.1 | AQB97549.1 | open | 1008 [NA] | 335 [AA] | 2781539-2782546 | WU27_13290 | biotin synthase |
| 3556 | CP011193.1 | AQB97550.1 | open | 2001 [NA] | 666 [AA] | 2793787-2795787 | WU27_13355 | cytochrome o ubiquinol oxidase subunit I |
| 3557 | CP011193.1 | AQB97551.1 | open | 2169 [NA] | 722 [AA] | 2825121-2827289 | WU27_13470 | penicillin-binding protein |
| 3558 | CP011193.1 | AQB97552.1 | open | 4566 [NA] | 1521 [AA] | 2827286-2831851 | WU27_13475 | alpha-2-macroglobulin |
| 3559 | CP011193.1 | AQB97553.1 | open | 831 [NA] | 276 [AA] | 2873006-2873836 | WU27_13700 | IclR family transcriptional regulator |
| 3560 | CP011193.1 | AQB97554.1 | open | 912 [NA] | 303 [AA] | 2901278-2902189 | WU27_13830 | hypothetical protein |
| 3561 | CP011193.1 | AQB97555.1 | open | 867 [NA] | 288 [AA] | 2905372-2906238 | WU27_13855 | ABC transporter permease |
| 3562 | CP011193.1 | AQB97556.1 | open | 741 [NA] | 246 [AA] | 2918265-2919005 | WU27_13920 | oxidoreductase |
| 3563 | CP011193.1 | AQB97557.1 | open | 1347 [NA] | 448 [AA] | 2932052-2933398 | WU27_13990 | MFS transporter |
| 3564 | CP011193.1 | AQB97558.1 | open | 858 [NA] | 285 [AA] | 2972357-2973214 | WU27_14200 | ABC transporter permease |
| 3565 | CP011193.1 | AQB97559.1 | open | 1167 [NA] | 388 [AA] | 3026452-3027618 | WU27_14415 | chromate transporter |
| 3566 | CP011193.1 | AQB97560.1 | open | 2199 [NA] | 732 [AA] | 3029102-3031300 | WU27_14425 | TonB-dependent receptor |
| 3567 | CP011193.1 | AQB97561.1 | open | 1980 [NA] | 659 [AA] | 3037674-3039653 | WU27_14475 | cytochrome o ubiquinol oxidase subunit I |
| 3568 | CP011193.1 | AQB97562.1 | open | 1125 [NA] | 374 [AA] | 3053966-3055090 | WU27_14555 | diaminohydroxyphosphoribosylaminopyrimidine deaminase |
| 3569 | CP011193.1 | AQB97563.1 | open | 429 [NA] | 142 [AA] | 3067717-3068145 | WU27_14625 | 50S ribosomal protein L13 |
| 3570 | CP011193.1 | AQB97564.1 | open | 1407 [NA] | 468 [AA] | 3084274-3085680 | WU27_14700 | glutamyl-tRNA synthetase |
| 3571 | CP011193.1 | AQB97565.1 | open | 942 [NA] | 313 [AA] | 3102825-3103766 | WU27_14780 | sugar kinase |
| 3572 | CP011193.1 | AQB97566.1 | open | 459 [NA] | 152 [AA] | 3117000-3117458 | WU27_14855 | transcriptional regulator |
| 3573 | CP011193.1 | AQB97567.1 | open | 429 [NA] | 142 [AA] | 3144564-3144992 | WU27_14970 | cell division protein MraZ |
| 3574 | CP011193.1 | AQB97568.1 | open | 477 [NA] | 158 [AA] | 3157787-3158263 | WU27_15025 | AsnC family transcriptional regulator |
| 3575 | CP011193.1 | AQB97569.1 | open | 306 [NA] | 101 [AA] | 3175773-3176078 | WU27_15120 | RND transporter |
| 3576 | CP011193.1 | AQB97570.1 | open | 939 [NA] | 312 [AA] | 3184163-3185101 | WU27_15175 | nickel transporter |
| 3577 | CP011193.1 | AQB97571.1 | open | 681 [NA] | 226 [AA] | 3202409-3203089 | WU27_15260 | 5-formyltetrahydrofolate cyclo-ligase |
| 3578 | CP011193.1 | AQB97572.1 | open | 2064 [NA] | 687 [AA] | 3203165-3205228 | WU27_15265 | lytic transglycosylase |
| 3579 | CP011193.1 | AQB97573.1 | open | 1479 [NA] | 492 [AA] | 3211730-3213208 | WU27_15295 | hypothetical protein |
| 3580 | CP011193.1 | AQB97574.1 | open | 303 [NA] | 100 [AA] | 3218689-3218991 | WU27_15340 | hypothetical protein |
| 3581 | CP011193.1 | AQB97575.1 | open | 2757 [NA] | 918 [AA] | 3252693-3255449 | WU27_15480 | restriction endonuclease |
| 3582 | CP011193.1 | AQB97576.1 | open | 1896 [NA] | 631 [AA] | 3274568-3276463 | WU27_15575 | sulfatase |
| 3583 | CP011193.1 | AQB97577.1 | open | 432 [NA] | 143 [AA] | 3296939-3297370 | WU27_15660 | peroxiredoxin |
| 3584 | CP011193.1 | AQB97578.1 | open | 618 [NA] | 205 [AA] | 3315599-3316216 | WU27_15745 | urease accessory protein UreJ |
| 3585 | CP011193.1 | AQB97579.1 | open | 972 [NA] | 323 [AA] | 3361956-3362927 | WU27_15980 | ABC transporter substrate-binding protein |
| 3586 | CP011193.1 | AQB97580.1 | open | 867 [NA] | 288 [AA] | 3378079-3378945 | WU27_16055 | multidrug DMT transporter |
| 3587 | CP011193.1 | AQB97581.1 | open | 990 [NA] | 329 [AA] | 3394730-3395719 | WU27_16110 | ABC transporter substrate-binding protein |
| 3588 | CP011193.1 | AQB97582.1 | open | 1767 [NA] | 588 [AA] | 3424571-3426337 | WU27_16265 | peptidase M61 |
| 3589 | CP011193.1 | AQB97583.1 | open | 321 [NA] | 106 [AA] | 3430280-3430600 | WU27_16290 | ABC transporter permease |
| 3590 | CP011193.1 | AQB97584.1 | open | 885 [NA] | 294 [AA] | 3437711-3438595 | WU27_16335 | hypothetical protein |
| 3591 | CP011193.1 | AQB97585.1 | open | 624 [NA] | 207 [AA] | 3458296-3458919 | WU27_16420 | TetR family transcriptional regulator |
| 3592 | CP011193.1 | AQB97586.1 | open | 645 [NA] | 214 [AA] | 3483290-3483934 | WU27_16545 | membrane protein |
| 3593 | CP011193.1 | AQB97587.1 | open | 1287 [NA] | 428 [AA] | 3484430-3485716 | WU27_16555 | membrane protein |
| 3594 | CP011193.1 | AQB97588.1 | open | 231 [NA] | 76 [AA] | 3503593-3503823 | WU27_16645 | hypothetical protein |
| 3595 | CP011193.1 | AQB97589.1 | open | 981 [NA] | 326 [AA] | 3532796-3533776 | WU27_16770 | oxidoreductase |
| 3596 | CP011193.1 | AQB97590.1 | open | 945 [NA] | 314 [AA] | 3539276-3540220 | WU27_16795 | LysR family transcriptional regulator |
| 3597 | CP011193.1 | AQB97591.1 | open | 963 [NA] | 320 [AA] | 3550786-3551748 | WU27_16845 | LysR family transcriptional regulator |
| 3598 | CP011193.1 | AQB97592.1 | open | 1314 [NA] | 437 [AA] | 3559423-3560736 | WU27_16890 | short-chain fatty acid transporter |
| 3599 | CP011193.1 | AQB97593.1 | open | 939 [NA] | 312 [AA] | 3573518-3574456 | WU27_16955 | hypothetical protein |
| 3600 | CP011193.1 | AQB97594.1 | open | 954 [NA] | 317 [AA] | 3584728-3585681 | WU27_17005 | thioredoxin reductase |
| 3601 | CP011193.1 | AQB97595.1 | open | 594 [NA] | 197 [AA] | 3597043-3597636 | WU27_17075 | phosphoheptose isomerase |
| 3602 | CP011193.1 | AQB97596.1 | open | 945 [NA] | 314 [AA] | 3639628-3640572 | WU27_17290 | iron ABC transporter |
| 3603 | CP011193.1 | AQB97597.1 | open | 366 [NA] | 121 [AA] | 3654090-3654455 | WU27_17375 | hypothetical protein |
| 3604 | CP011193.1 | AQB97598.1 | open | 606 [NA] | 201 [AA] | 3661788-3662393 | WU27_17420 | hypothetical protein |
| 3605 | CP011193.1 | AQB97599.1 | open | 165 [NA] | 54 [AA] | 3662481-3662645 | WU27_17425 | rubredoxin |
| 3606 | CP011193.1 | AQB97600.1 | open | 642 [NA] | 213 [AA] | 3702399-3703040 | WU27_17620 | ubiquinol-cytochrome C reductase |
| 3607 | CP011193.1 | AQB97601.1 | open | 849 [NA] | 282 [AA] | 3704513-3705361 | WU27_17630 | cytochrome C |
| 3608 | CP011193.1 | AQB97602.1 | open | 621 [NA] | 206 [AA] | 3731549-3732169 | WU27_17775 | membrane protein |
| 3609 | CP011193.1 | AQB97603.1 | open | 783 [NA] | 260 [AA] | 3774829-3775611 | WU27_17955 | IclR family transcriptional regulator |
| 3610 | CP011193.1 | AQB97604.1 | open | 1041 [NA] | 346 [AA] | 3778625-3779665 | WU27_17985 | cyclase |
| 3611 | CP011193.1 | AQB97605.1 | open | 450 [NA] | 149 [AA] | 3796235-3796684 | WU27_18060 | hypothetical protein |
| 3612 | CP011193.1 | AQB97606.1 | open | 477 [NA] | 158 [AA] | 3812741-3813217 | WU27_18135 | bacterioferritin |
| 3613 | CP011193.1 | AQB97607.1 | open | 1554 [NA] | 517 [AA] | 3822501-3824054 | WU27_18185 | ubiquinone biosynthesis protein UbiB |
| 3614 | CP011193.1 | AQB97608.1 | open | 933 [NA] | 310 [AA] | 3841031-3841963 | WU27_18285 | lipase |
| 3615 | CP011193.1 | AQB97609.1 | open | 612 [NA] | 203 [AA] | 3860102-3860713 | WU27_18360 | hypothetical protein |
| 3616 | CP011193.1 | AQB97610.1 | open | 1179 [NA] | 392 [AA] | 3885051-3886229 | WU27_18500 | cytochrome C550 |
| 3617 | CP011193.1 | AQB97611.1 | open | 1008 [NA] | 335 [AA] | 3893853-3894860 | WU27_18555 | heptosyltransferase |
| 3618 | CP011193.1 | AQB97612.1 | open | 945 [NA] | 314 [AA] | 3907233-3908177 | WU27_18615 | integrase |
| 3619 | CP011193.1 | AQB97613.1 | open | 798 [NA] | 265 [AA] | 3932277-3933074 | WU27_18750 | sulfonate ABC transporter ATP-binding protein |
| 3620 | CP011193.1 | AQB97614.1 | open | 627 [NA] | 208 [AA] | 3938031-3938657 | WU27_18775 | TetR family transcriptional regulator |
| 3621 | CP011193.1 | AQB97615.1 | open | 780 [NA] | 259 [AA] | 3945978-3946757 | WU27_18815 | hypothetical protein |
| 3622 | CP011193.1 | AQB97616.1 | open | 1362 [NA] | 453 [AA] | 3950098-3951459 | WU27_18840 | (Fe-S)-binding protein |
| 3623 | CP011193.1 | AQB97617.1 | open | 222 [NA] | 73 [AA] | 3962320-3962541 | WU27_18895 | hypothetical protein |
| 3624 | CP011193.1 | AQB97618.1 | open | 888 [NA] | 295 [AA] | 3976351-3977238 | WU27_18970 | RNA polymerase factor sigma-32 |
| 3625 | CP011193.1 | AQB97619.1 | open | 246 [NA] | 81 [AA] | 3995165-3995410 | WU27_19050 | BolA family transcriptional regulator |
| 3626 | CP011193.1 | AQB97620.1 | open | 261 [NA] | 86 [AA] | 4010641-4010901 | WU27_19160 | type IV secretion protein VirB2 |
| 3627 | CP011193.1 | AQB97621.1 | open | 819 [NA] | 272 [AA] | 4015966-4016784 | WU27_19190 | type IV secretion protein F |
| 3628 | CP011193.1 | AQB97622.1 | open | 1125 [NA] | 374 [AA] | 4016765-4017889 | WU27_19195 | type IV secretion protein G |
| 3629 | CP011193.1 | AQB97623.1 | open | 645 [NA] | 214 [AA] | 4045965-4046609 | WU27_19315 | dephospho-CoA kinase |
| 3630 | CP011193.1 | AQB97624.1 | open | 939 [NA] | 312 [AA] | 4070349-4071287 | WU27_19430 | acetyl-CoA acetyltransferase |
| 3631 | CP011193.1 | AQB97625.1 | open | 1233 [NA] | 410 [AA] | 4079270-4080502 | WU27_19475 | formyl-CoA transferase |
| 3632 | CP011193.1 | AQB97626.1 | open | 1440 [NA] | 479 [AA] | 4082131-4083570 | WU27_19490 | catalase |
| 3633 | CP011193.1 | AQB97627.1 | open | 1377 [NA] | 458 [AA] | 4098261-4099637 | WU27_19560 | histidine kinase |