Genome Explorer: Bordetella pertussis J334 (SEQF7965.1)
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NCBI Annotation for SEQF7965.1
| Genome selected: Bordetella pertussis J334 | |||
| Contigs: | 1 | Bases: | 4110578 bps |
| CDS: | 326 | rRNA: | 9 |
| tmRNA: | 1 | tRNA: | 51 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3501 | CP026437.1 | QBT07810.1 | open | 795 [NA] | 264 [AA] | 2069602-2070396 | C3E12_10000 | SDR family NAD(P)-dependent oxidoreductase |
| 3502 | CP026437.1 | QBT07811.1 | open | 1014 [NA] | 337 [AA] | 2082939-2083952 | C3E12_10070 | flavin-nucleotide-binding protein |
| 3503 | CP026437.1 | QBT07812.1 | open | 876 [NA] | 291 [AA] | 2107862-2108737 | C3E12_10215 | PhzF family phenazine biosynthesis protein |
| 3504 | CP026437.1 | QBT07813.1 | open | 1521 [NA] | 506 [AA] | 2112724-2114244 | C3E12_10240 | aldehyde dehydrogenase |
| 3505 | CP026437.1 | QBT07814.1 | open | 144 [NA] | 47 [AA] | 2126422-2126565 | C3E12_10305 | cbb3-type cytochrome oxidase assembly protein CcoS |
| 3506 | CP026437.1 | QBT07815.1 | open | 2169 [NA] | 722 [AA] | 2139855-2142023 | C3E12_10400 | RNA polymerase sigma factor RpoD |
| 3507 | CP026437.1 | QBT07816.1 | open | 375 [NA] | 124 [AA] | 2181558-2181932 | C3E12_10590 | hypothetical protein |
| 3508 | CP026437.1 | QBT07817.1 | open | 549 [NA] | 182 [AA] | 2286907-2287455 | C3E12_11095 | arylesterase |
| 3509 | CP026437.1 | QBT07818.1 | open | 753 [NA] | 250 [AA] | 2295997-2296749 | C3E12_11140 | hypothetical protein |
| 3510 | CP026437.1 | QBT07819.1 | open | 690 [NA] | 229 [AA] | 2299420-2300109 | C3E12_11160 | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
| 3511 | CP026437.1 | QBT07820.1 | open | 1017 [NA] | 338 [AA] | 2301983-2302999 | C3E12_11175 | IS110 family transposase IS1663 |
| 3512 | CP026437.1 | QBT07821.1 | open | 2712 [NA] | 903 [AA] | 2318103-2320814 | C3E12_11250 | autotransporter BapA |
| 3513 | CP026437.1 | QBT07822.1 | open | 699 [NA] | 232 [AA] | 2332384-2333082 | C3E12_11310 | hypothetical protein |
| 3514 | CP026437.1 | QBT07823.1 | open | 1080 [NA] | 359 [AA] | 2338866-2339945 | C3E12_11350 | YscQ/HrcQ family type III secretion apparatus protein |
| 3515 | CP026437.1 | QBT07824.1 | open | 2100 [NA] | 699 [AA] | 2351882-2353981 | C3E12_11445 | EscV/YscV/HrcV family type III secretion system export apparatus protein |
| 3516 | CP026437.1 | QBT07825.1 | open | 1698 [NA] | 565 [AA] | 2367270-2368967 | C3E12_11520 | putative 2-aminoethylphosphonate ABC transporter permease subunit |
| 3517 | CP026437.1 | QBT07826.1 | open | 1014 [NA] | 337 [AA] | 2393517-2394530 | C3E12_11635 | histone deacetylase family protein |
| 3518 | CP026437.1 | QBT07827.1 | open | 1122 [NA] | 373 [AA] | 2427788-2428909 | C3E12_11790 | transferase |
| 3519 | CP026437.1 | QBT07828.1 | open | 780 [NA] | 259 [AA] | 2473603-2474382 | C3E12_11990 | GntR family transcriptional regulator |
| 3520 | CP026437.1 | QBT07829.1 | open | 891 [NA] | 296 [AA] | 2519442-2520332 | C3E12_12205 | EamA family transporter |
| 3521 | CP026437.1 | QBT07830.1 | open | 594 [NA] | 197 [AA] | 2558500-2559093 | C3E12_12405 | DUF177 domain-containing protein |
| 3522 | CP026437.1 | QBT07831.1 | open | 2361 [NA] | 786 [AA] | 2587478-2589838 | C3E12_12550 | DNA translocase FtsK |
| 3523 | CP026437.1 | QBT07832.1 | open | 888 [NA] | 295 [AA] | 2612667-2613554 | C3E12_12660 | MoxR family ATPase |
| 3524 | CP026437.1 | QBT07833.1 | open | 243 [NA] | 80 [AA] | 2623292-2623534 | C3E12_12705 | hypothetical protein |
| 3525 | CP026437.1 | QBT07834.1 | open | 420 [NA] | 139 [AA] | 2628532-2628951 | C3E12_12730 | transcriptional repressor |
| 3526 | CP026437.1 | QBT07835.1 | open | 1437 [NA] | 478 [AA] | 2632675-2634111 | C3E12_12760 | MmgE/PrpD family protein |
| 3527 | CP026437.1 | QBT07836.1 | open | 1185 [NA] | 394 [AA] | 2658674-2659858 | C3E12_12885 | heme biosynthesis operon protein HemX |
| 3528 | CP026437.1 | QBT07837.1 | open | 1359 [NA] | 452 [AA] | 2672673-2674031 | C3E12_12950 | sensor histidine kinase |
| 3529 | CP026437.1 | QBT07838.1 | open | 900 [NA] | 299 [AA] | 2686677-2687576 | C3E12_13015 | recombination-associated protein RdgC |
| 3530 | CP026437.1 | QBT07839.1 | open | 384 [NA] | 127 [AA] | 2691182-2691565 | C3E12_13045 | hypothetical protein |
| 3531 | CP026437.1 | QBT07840.1 | open | 1020 [NA] | 339 [AA] | 2778521-2779540 | C3E12_13495 | tripartite tricarboxylate transporter substrate binding protein |
| 3532 | CP026437.1 | QBT07841.1 | open | 507 [NA] | 168 [AA] | 2820329-2820835 | C3E12_13680 | phenylacetate-CoA oxygenase subunit PaaJ |
| 3533 | CP026437.1 | QBT07842.1 | open | 1422 [NA] | 473 [AA] | 2840915-2842336 | C3E12_13790 | argininosuccinate lyase |
| 3534 | CP026437.1 | QBT07843.1 | open | 504 [NA] | 167 [AA] | 2854659-2855162 | C3E12_13855 | peroxiredoxin |
| 3535 | CP026437.1 | QBT07844.1 | open | 1008 [NA] | 335 [AA] | 2857587-2858594 | C3E12_13870 | biotin synthase |
| 3536 | CP026437.1 | QBT07845.1 | open | 2169 [NA] | 722 [AA] | 2901169-2903337 | C3E12_14045 | penicillin-binding protein 1C |
| 3537 | CP026437.1 | QBT07846.1 | open | 831 [NA] | 276 [AA] | 2949054-2949884 | C3E12_14280 | IclR family transcriptional regulator |
| 3538 | CP026437.1 | QBT07847.1 | open | 912 [NA] | 303 [AA] | 2977326-2978237 | C3E12_14420 | tripartite tricarboxylate transporter substrate binding protein |
| 3539 | CP026437.1 | QBT07848.1 | open | 867 [NA] | 288 [AA] | 2980371-2981237 | C3E12_14440 | sugar ABC transporter permease |
| 3540 | CP026437.1 | QBT07849.1 | open | 465 [NA] | 154 [AA] | 2988081-2988545 | C3E12_14480 | redox-sensitive transcriptional activator SoxR |
| 3541 | CP026437.1 | QBT07850.1 | open | 741 [NA] | 246 [AA] | 2993264-2994004 | C3E12_14505 | oxidoreductase |
| 3542 | CP026437.1 | QBT07851.1 | open | 750 [NA] | 249 [AA] | 3006274-3007023 | C3E12_14590 | NAD(P)-dependent oxidoreductase |
| 3543 | CP026437.1 | QBT07852.1 | open | 1347 [NA] | 448 [AA] | 3007051-3008397 | C3E12_14595 | MFS transporter |
| 3544 | CP026437.1 | QBT07853.1 | open | 2490 [NA] | 829 [AA] | 3012404-3014893 | C3E12_14620 | copper-translocating P-type ATPase |
| 3545 | CP026437.1 | QBT07854.1 | open | 690 [NA] | 229 [AA] | 3037733-3038422 | C3E12_14750 | ABC transporter ATP-binding protein |
| 3546 | CP026437.1 | QBT07855.1 | open | 858 [NA] | 285 [AA] | 3047356-3048213 | C3E12_14805 | ABC transporter permease |
| 3547 | CP026437.1 | QBT07856.1 | open | 1326 [NA] | 441 [AA] | 3101292-3102617 | C3E12_15025 | chromate transporter |
| 3548 | CP026437.1 | QBT07857.1 | open | 2199 [NA] | 732 [AA] | 3104101-3106299 | C3E12_15035 | TonB-dependent receptor |
| 3549 | CP026437.1 | QBT07858.1 | open | 1980 [NA] | 659 [AA] | 3112673-3114652 | C3E12_15085 | cytochrome o ubiquinol oxidase subunit I |
| 3550 | CP026437.1 | QBT07859.1 | open | 1125 [NA] | 374 [AA] | 3128965-3130089 | C3E12_15170 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD |
| 3551 | CP026437.1 | QBT07860.1 | open | 429 [NA] | 142 [AA] | 3142716-3143144 | C3E12_15240 | 50S ribosomal protein L13 |
| 3552 | CP026437.1 | QBT07861.1 | open | 1446 [NA] | 481 [AA] | 3159234-3160679 | C3E12_15320 | glutamate--tRNA ligase |
| 3553 | CP026437.1 | QBT07862.1 | open | 3063 [NA] | 1020 [AA] | 3163664-3166726 | C3E12_15345 | pyruvate ferredoxin oxidoreductase |
| 3554 | CP026437.1 | QBT07863.1 | open | 258 [NA] | 85 [AA] | 3163275-3163532 | C3E12_15340 | hypothetical protein |
| 3555 | CP026437.1 | QBT07864.1 | open | 1128 [NA] | 375 [AA] | 3175475-3176602 | C3E12_15385 | teichoic acid biosynthesis protein |
| 3556 | CP026437.1 | QBT07865.1 | open | 942 [NA] | 313 [AA] | 3177824-3178765 | C3E12_15400 | carbohydrate kinase family protein |
| 3557 | CP026437.1 | QBT07866.1 | open | 1701 [NA] | 566 [AA] | 3216455-3218155 | C3E12_15575 | penicillin-binding protein 2 |
| 3558 | CP026437.1 | QBT07867.1 | open | 477 [NA] | 158 [AA] | 3232785-3233261 | C3E12_15650 | Lrp/AsnC family transcriptional regulator |
| 3559 | CP026437.1 | QBT07868.1 | open | 306 [NA] | 101 [AA] | 3250771-3251076 | C3E12_15755 | RND transporter |
| 3560 | CP026437.1 | QBT07869.1 | open | 624 [NA] | 207 [AA] | 3258517-3259140 | C3E12_15805 | DUF1007 domain-containing protein |
| 3561 | CP026437.1 | QBT07870.1 | open | 1374 [NA] | 457 [AA] | 3275756-3277129 | C3E12_15890 | MFS transporter |
| 3562 | CP026437.1 | QBT07871.1 | open | 1479 [NA] | 492 [AA] | 3286728-3288206 | C3E12_15930 | phospholipase D family protein |
| 3563 | CP026437.1 | QBT07872.1 | open | 885 [NA] | 294 [AA] | 3290927-3291811 | C3E12_15950 | alpha/beta hydrolase |
| 3564 | CP026437.1 | QBT07873.1 | open | 426 [NA] | 141 [AA] | 3293192-3293617 | C3E12_15970 | hypothetical protein |
| 3565 | CP026437.1 | QBT07874.1 | open | 141 [NA] | 46 [AA] | 3330805-3330945 | C3E12_16125 | DEAD/DEAH box helicase |
| 3566 | CP026437.1 | QBT07875.1 | open | 933 [NA] | 310 [AA] | 3337156-3338088 | C3E12_16160 | ribose-phosphate pyrophosphokinase |
| 3567 | CP026437.1 | QBT07876.1 | open | 1284 [NA] | 427 [AA] | 3375564-3376847 | C3E12_16325 | aspartate aminotransferase family protein |
| 3568 | CP026437.1 | QBT07877.1 | open | 1017 [NA] | 338 [AA] | 3434613-3435629 | C3E12_16615 | IS110-like element IS1663 family transposase |
| 3569 | CP026437.1 | QBT07878.1 | open | 1017 [NA] | 338 [AA] | 3467907-3468923 | C3E12_16755 | IS110-like element IS1663 family transposase |
| 3570 | CP026437.1 | QBT07879.1 | open | 990 [NA] | 329 [AA] | 3469726-3470715 | C3E12_16765 | tripartite tricarboxylate transporter substrate binding protein |
| 3571 | CP026437.1 | QBT07880.1 | open | 321 [NA] | 106 [AA] | 3505276-3505596 | C3E12_16940 | ABC transporter permease |
| 3572 | CP026437.1 | QBT07881.1 | open | 885 [NA] | 294 [AA] | 3512707-3513591 | C3E12_16985 | hypothetical protein |
| 3573 | CP026437.1 | QBT07882.1 | open | 828 [NA] | 275 [AA] | 3543381-3544208 | C3E12_17120 | copper resistance protein B |
| 3574 | CP026437.1 | QBT07883.1 | open | 1287 [NA] | 428 [AA] | 3559426-3560712 | C3E12_17200 | hypothetical protein |
| 3575 | CP026437.1 | QBT07884.1 | open | 231 [NA] | 76 [AA] | 3577540-3577770 | C3E12_17290 | hypothetical protein |
| 3576 | CP026437.1 | QBT07885.1 | open | 981 [NA] | 326 [AA] | 3606743-3607723 | C3E12_17415 | NAD(P)-dependent oxidoreductase |
| 3577 | CP026437.1 | QBT07886.1 | open | 945 [NA] | 314 [AA] | 3613223-3614167 | C3E12_17440 | LysR family transcriptional regulator |
| 3578 | CP026437.1 | QBT07887.1 | open | 963 [NA] | 320 [AA] | 3624733-3625695 | C3E12_17490 | LysR family transcriptional regulator |
| 3579 | CP026437.1 | QBT07888.1 | open | 408 [NA] | 135 [AA] | 3628057-3628464 | C3E12_17510 | DUF126 domain-containing protein |
| 3580 | CP026437.1 | QBT07889.1 | open | 351 [NA] | 116 [AA] | 3670369-3670719 | C3E12_17710 | rhodanese |
| 3581 | CP026437.1 | QBT07890.1 | open | 615 [NA] | 204 [AA] | 3674281-3674895 | C3E12_17740 | ComF family protein |
| 3582 | CP026437.1 | QBT07891.1 | open | 777 [NA] | 258 [AA] | 3707665-3708441 | C3E12_17895 | L-aspartate dehydrogenase |
| 3583 | CP026437.1 | QBT07892.1 | open | 972 [NA] | 323 [AA] | 3785357-3786328 | C3E12_18330 | tripartite tricarboxylate transporter substrate binding protein |
| 3584 | CP026437.1 | QBT07893.1 | open | 1608 [NA] | 535 [AA] | 3798538-3800145 | C3E12_18395 | methylcrotonoyl-CoA carboxylase |
| 3585 | CP026437.1 | QBT07894.1 | open | 1473 [NA] | 490 [AA] | 3822408-3823880 | C3E12_18480 | aldehyde dehydrogenase family protein |
| 3586 | CP026437.1 | QBT07895.1 | open | 1017 [NA] | 338 [AA] | 3842517-3843533 | C3E12_18570 | IS110-like element IS1663 family transposase |
| 3587 | CP026437.1 | QBT07896.1 | open | 501 [NA] | 166 [AA] | 3893803-3894303 | C3E12_18875 | single-stranded DNA-binding protein |
| 3588 | CP026437.1 | QBT07897.1 | open | 504 [NA] | 167 [AA] | 3896696-3897199 | C3E12_18885 | hypothetical protein |
| 3589 | CP026437.1 | QBT07898.1 | open | 834 [NA] | 277 [AA] | 3899904-3900737 | C3E12_18910 | LysR family transcriptional regulator |
| 3590 | CP026437.1 | QBT07899.1 | open | 735 [NA] | 244 [AA] | 3942864-3943598 | C3E12_19135 | NAD(+) diphosphatase |
| 3591 | CP026437.1 | QBT07900.1 | open | 870 [NA] | 289 [AA] | 3952714-3953583 | C3E12_19180 | branched-chain amino acid ABC transporter permease |
| 3592 | CP026437.1 | QBT07901.1 | open | 1362 [NA] | 453 [AA] | 3954280-3955641 | C3E12_19190 | aromatic ring-hydroxylating dioxygenase subunit alpha |
| 3593 | CP026437.1 | QBT07902.1 | open | 222 [NA] | 73 [AA] | 3966502-3966723 | C3E12_19245 | DUF3717 domain-containing protein |
| 3594 | CP026437.1 | QBT07903.1 | open | 723 [NA] | 240 [AA] | 3970101-3970823 | C3E12_19270 | SURF1 family protein |
| 3595 | CP026437.1 | QBT07904.1 | open | 1125 [NA] | 374 [AA] | 4020947-4022071 | C3E12_19545 | type IV secretion system protein PtlG |
| 3596 | CP026437.1 | QBT07905.1 | open | 792 [NA] | 263 [AA] | 4024424-4025215 | C3E12_19565 | AraC family transcriptional regulator |
| 3597 | CP026437.1 | QBT07906.1 | open | 1023 [NA] | 340 [AA] | 4074447-4075469 | C3E12_19785 | CoA transferase |
| 3598 | CP026437.1 | QBT07907.1 | open | 1239 [NA] | 412 [AA] | 4083446-4084684 | C3E12_19830 | CoA transferase |