Genome Explorer: Limosilactobacillus fermentum GR1007 (SEQF9218.1)
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NCBI Annotation for SEQF9218.1
| Genome selected: Limosilactobacillus fermentum GR1007 | |||
| Contigs: | 1 | Bases: | 2238385 bps |
| CDS: | 169 | rRNA: | 15 |
| tmRNA: | 1 | tRNA: | 58 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | CP071001.1 | QSH38978.1 | open | 1314 [NA] | 437 [AA] | 1463455-1464768 | JYQ67_07445 | transposase |
| 2002 | CP071001.1 | QSH38979.1 | open | 657 [NA] | 218 [AA] | 1477619-1478275 | JYQ67_07535 | type I-E CRISPR-associated protein Cas6/Cse3/CasE |
| 2003 | CP071001.1 | QSH38980.1 | open | 1101 [NA] | 366 [AA] | 1478976-1480076 | JYQ67_07545 | type I-E CRISPR-associated protein Cas7/Cse4/CasC |
| 2004 | CP071001.1 | QSH38981.1 | open | 1659 [NA] | 552 [AA] | 1480686-1482344 | JYQ67_07555 | type I-E CRISPR-associated protein Cse1/CasA |
| 2005 | CP071001.1 | QSH38982.1 | open | 642 [NA] | 213 [AA] | 1509732-1510373 | JYQ67_07690 | thiamine diphosphokinase |
| 2006 | CP071001.1 | QSH38983.1 | open | 2661 [NA] | 886 [AA] | 1573430-1576090 | JYQ67_08055 | DNA polymerase I |
| 2007 | CP071001.1 | QSH38984.1 | open | 2217 [NA] | 738 [AA] | 1632556-1634772 | JYQ67_08360 | anaerobic ribonucleoside-triphosphate reductase |
| 2008 | CP071001.1 | QSH38985.1 | open | 1245 [NA] | 414 [AA] | 1660961-1662205 | JYQ67_08540 | carboxylate--amine ligase |
| 2009 | CP071001.1 | QSH38986.1 | open | 1032 [NA] | 343 [AA] | 1671669-1672700 | JYQ67_08590 | sugar transferase |
| 2010 | CP071001.1 | QSH38987.1 | open | 1320 [NA] | 439 [AA] | 1707391-1708710 | JYQ67_08755 | DEAD/DEAH box helicase |
| 2011 | CP071001.1 | QSH38988.1 | open | 399 [NA] | 132 [AA] | 1719672-1720070 | JYQ67_08815 | IS200/IS605 family transposase |
| 2012 | CP071001.1 | QSH38989.1 | open | 444 [NA] | 147 [AA] | 1728172-1728615 | JYQ67_08875 | Rrf2 family transcriptional regulator |
| 2013 | CP071001.1 | QSH38990.1 | open | 906 [NA] | 301 [AA] | 1739186-1740091 | JYQ67_08935 | IS3 family transposase |
| 2014 | CP071001.1 | QSH38991.1 | open | 561 [NA] | 186 [AA] | 1750674-1751234 | JYQ67_09010 | hypothetical protein |
| 2015 | CP071001.1 | QSH38992.1 | open | 1251 [NA] | 416 [AA] | 1751849-1753099 | JYQ67_09020 | transposase |
| 2016 | CP071001.1 | QSH38993.1 | open | 231 [NA] | 76 [AA] | 1758766-1758996 | JYQ67_09050 | hypothetical protein |
| 2017 | CP071001.1 | QSH38994.1 | open | 411 [NA] | 136 [AA] | 1763413-1763823 | JYQ67_09065 | restriction endonuclease subunit S |
| 2018 | CP071001.1 | QSH38995.1 | open | 1584 [NA] | 527 [AA] | 1795470-1797053 | JYQ67_09255 | MucBP domain-containing protein |
| 2019 | CP071001.1 | QSH38996.1 | open | 702 [NA] | 233 [AA] | 1801066-1801767 | JYQ67_09270 | hypothetical protein |
| 2020 | CP071001.1 | QSH38997.1 | open | 831 [NA] | 276 [AA] | 1822366-1823196 | JYQ67_09370 | energy-coupling factor transporter ATPase |
| 2021 | CP071001.1 | QSH38998.1 | open | 258 [NA] | 85 [AA] | 1858303-1858560 | JYQ67_09590 | hypothetical protein |
| 2022 | CP071001.1 | QSH38999.1 | open | 1494 [NA] | 497 [AA] | 1866544-1868037 | JYQ67_09675 | amino acid permease |
| 2023 | CP071001.1 | QSH39000.1 | open | 1452 [NA] | 483 [AA] | 1884091-1885542 | JYQ67_09770 | multidrug efflux MFS transporter |
| 2024 | CP071001.1 | QSH39001.1 | open | 663 [NA] | 220 [AA] | 1893142-1893804 | JYQ67_09810 | uracil-DNA glycosylase |
| 2025 | CP071001.1 | QSH39002.1 | open | 1152 [NA] | 383 [AA] | 1902472-1903623 | JYQ67_09855 | NADP-dependent malic enzyme |
| 2026 | CP071001.1 | QSH39003.1 | open | 1011 [NA] | 336 [AA] | 1921014-1922024 | JYQ67_09930 | zinc-dependent alcohol dehydrogenase family protein |
| 2027 | CP071001.1 | QSH39004.1 | open | 729 [NA] | 242 [AA] | 1941629-1942357 | JYQ67_10025 | WYL domain-containing protein |
| 2028 | CP071001.1 | QSH39005.1 | open | 357 [NA] | 118 [AA] | 1983906-1984262 | JYQ67_10230 | heavy metal-binding domain-containing protein |
| 2029 | CP071001.1 | QSH39006.1 | open | 687 [NA] | 228 [AA] | 1984313-1984999 | JYQ67_10235 | arginase family protein |
| 2030 | CP071001.1 | QSH39007.1 | open | 762 [NA] | 253 [AA] | 1987333-1988094 | JYQ67_10260 | DUF4767 domain-containing protein |
| 2031 | CP071001.1 | QSH39008.1 | open | 876 [NA] | 291 [AA] | 2049978-2050853 | JYQ67_10515 | ROK family protein |
| 2032 | CP071001.1 | QSH39009.1 | open | 885 [NA] | 294 [AA] | 2060973-2061857 | JYQ67_10570 | IS3 family transposase |
| 2033 | CP071001.1 | QSH39010.1 | open | 621 [NA] | 206 [AA] | 2060365-2060985 | JYQ67_10565 | transposase |
| 2034 | CP071001.1 | QSH39011.1 | open | 855 [NA] | 284 [AA] | 2061919-2062773 | JYQ67_10575 | NAD(P)H-binding protein |
| 2035 | CP071001.1 | QSH39012.1 | open | 963 [NA] | 320 [AA] | 2080738-2081700 | JYQ67_10660 | alpha/beta hydrolase |
| 2036 | CP071001.1 | QSH39013.1 | open | 819 [NA] | 272 [AA] | 2085564-2086382 | JYQ67_10695 | SPFH/Band 7/PHB domain protein |
| 2037 | CP071001.1 | QSH39014.1 | open | 909 [NA] | 302 [AA] | 2094042-2094950 | JYQ67_10730 | IS3 family transposase |
| 2038 | CP071001.1 | QSH39015.1 | open | 165 [NA] | 54 [AA] | 2164531-2164695 | JYQ67_11085 | DUF2933 domain-containing protein |
| 2039 | CP071001.1 | QSH39016.1 | open | 909 [NA] | 302 [AA] | 2172189-2173097 | JYQ67_11125 | IS3 family transposase |
| 2040 | CP071001.1 | QSH39017.1 | open | 1944 [NA] | 647 [AA] | 2173353-2175296 | JYQ67_11130 | MFS transporter |
| 2041 | CP071001.1 | QSH39018.1 | open | 795 [NA] | 264 [AA] | 2188820-2189614 | JYQ67_11205 | nicotinamide mononucleotide transporter |
| 2042 | CP071001.1 | QSH39019.1 | open | 1302 [NA] | 433 [AA] | 2192403-2193704 | JYQ67_11220 | NCS2 family permease |
| 2043 | CP071001.1 | QSH39020.1 | open | 1911 [NA] | 636 [AA] | 2227694-2229604 | JYQ67_11405 | asparagine synthase (glutamine-hydrolyzing) |
| 2044 | CP071001.1 | QSH39021.1 | open | 1422 [NA] | 473 [AA] | 2229911-2231332 | JYQ67_11410 | amino acid permease |
| 2045 | CP071001.1 | QSH39022.1 | open | 516 [NA] | 171 [AA] | 1495202-1495717 | JYQ67_07630 | hypothetical protein |