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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Eubacterium limosum ATCC 8486 (SEQF4134.2)
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PROKKA Annotation for SEQF4134.2
Genome selected: Eubacterium limosum ATCC 8486
Contigs:1 Bases:4422837 bps
CDS:4127 rRNA:16
tmRNA:1 tRNA:61
Annotation Table [page:9]
Number of Records Found: 4127 [9 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
4001 SEQF4134.2_CP019962.1 SEQF4134.2_04188 open 1893 [NA] 630 [AA] 4303716-4305608 tadA tRNA-specific adenosine deaminase
4002 SEQF4134.2_CP019962.1 SEQF4134.2_04189 open 609 [NA] 202 [AA] 4305665-4306273 ssuB_2 Aliphatic sulfonates import ATP-binding protein SsuB
4003 SEQF4134.2_CP019962.1 SEQF4134.2_04190 open 681 [NA] 226 [AA] 4306263-4306943 cmpB Bicarbonate transport system permease protein CmpB
4004 SEQF4134.2_CP019962.1 SEQF4134.2_04191 open 1005 [NA] 334 [AA] 4307017-4308021 hypothetical protein
4005 SEQF4134.2_CP019962.1 SEQF4134.2_04192 open 1146 [NA] 381 [AA] 4308315-4309460 mdh NAD-dependent methanol dehydrogenase
4006 SEQF4134.2_CP019962.1 SEQF4134.2_04193 open 2388 [NA] 795 [AA] 4309590-4311977 lon Lon protease
4007 SEQF4134.2_CP019962.1 SEQF4134.2_04194 open 420 [NA] 139 [AA] 4312013-4312432 hypothetical protein
4008 SEQF4134.2_CP019962.1 SEQF4134.2_04195 open 657 [NA] 218 [AA] 4312552-4313208 hxpB Hexitol phosphatase B
4009 SEQF4134.2_CP019962.1 SEQF4134.2_04196 open 657 [NA] 218 [AA] 4313296-4313952 hypothetical protein
4010 SEQF4134.2_CP019962.1 SEQF4134.2_04197 open 615 [NA] 204 [AA] 4314667-4315281 hypothetical protein
4011 SEQF4134.2_CP019962.1 SEQF4134.2_04198 open 429 [NA] 142 [AA] 4315339-4315767 Flavodoxin
4012 SEQF4134.2_CP019962.1 SEQF4134.2_04199 open 564 [NA] 187 [AA] 4315792-4316355 hypothetical protein
4013 SEQF4134.2_CP019962.1 SEQF4134.2_04200 open 219 [NA] 72 [AA] 4316648-4316866 hypothetical protein
4014 SEQF4134.2_CP019962.1 SEQF4134.2_04201 open 222 [NA] 73 [AA] 4316879-4317100 hypothetical protein
4015 SEQF4134.2_CP019962.1 SEQF4134.2_04202 open 243 [NA] 80 [AA] 4317189-4317431 hypothetical protein
4016 SEQF4134.2_CP019962.1 SEQF4134.2_04203 open 2091 [NA] 696 [AA] 4317446-4319536 ctpC Manganese-exporting P-type ATPase
4017 SEQF4134.2_CP019962.1 SEQF4134.2_04204 open 375 [NA] 124 [AA] 4319559-4319933 ybaN_2 Inner membrane protein YbaN
4018 SEQF4134.2_CP019962.1 SEQF4134.2_04205 open 1785 [NA] 594 [AA] 4319926-4321710 Putative multidrug export ATP-bindingpermease protein
4019 SEQF4134.2_CP019962.1 SEQF4134.2_04206 open 1653 [NA] 550 [AA] 4321661-4323313 putative ABC transporter ATP-bindingpermease protein
4020 SEQF4134.2_CP019962.1 SEQF4134.2_04207 open 300 [NA] 99 [AA] 4323313-4323612 hypothetical protein
4021 SEQF4134.2_CP019962.1 SEQF4134.2_04208 open 534 [NA] 177 [AA] 4323660-4324193 hypothetical protein
4022 SEQF4134.2_CP019962.1 SEQF4134.2_04209 open 1014 [NA] 337 [AA] 4324165-4325178 hypothetical protein
4023 SEQF4134.2_CP019962.1 SEQF4134.2_04210 open 762 [NA] 253 [AA] 4325241-4326002 cbf2 Putative peptidyl-prolyl cis-trans isomerase Cbf2
4024 SEQF4134.2_CP019962.1 SEQF4134.2_04211 open 1323 [NA] 440 [AA] 4326050-4327372 mepA_16 Multidrug export protein MepA
4025 SEQF4134.2_CP019962.1 SEQF4134.2_04212 open 1794 [NA] 597 [AA] 4327621-4329414 hypothetical protein
4026 SEQF4134.2_CP019962.1 SEQF4134.2_04213 open 861 [NA] 286 [AA] 4329723-4330583 rhaS_6 HTH-type transcriptional activator RhaS
4027 SEQF4134.2_CP019962.1 SEQF4134.2_04214 open 930 [NA] 309 [AA] 4330573-4331502 hypothetical protein
4028 SEQF4134.2_CP019962.1 SEQF4134.2_04215 open 729 [NA] 242 [AA] 4331529-4332257 cobB NAD-dependent protein deacetylase
4029 SEQF4134.2_CP019962.1 SEQF4134.2_04216 open 678 [NA] 225 [AA] 4332424-4333101 hypothetical protein
4030 SEQF4134.2_CP019962.1 SEQF4134.2_04217 open 555 [NA] 184 [AA] 4333173-4333727 hypothetical protein
4031 SEQF4134.2_CP019962.1 SEQF4134.2_04218 open 1317 [NA] 438 [AA] 4333759-4335075 hypothetical protein
4032 SEQF4134.2_CP019962.1 SEQF4134.2_04219 open 744 [NA] 247 [AA] 4335261-4336004 gpmA 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
4033 SEQF4134.2_CP019962.1 SEQF4134.2_04220 open 912 [NA] 303 [AA] 4336244-4337155 hypothetical protein
4034 SEQF4134.2_CP019962.1 SEQF4134.2_04222 open 1041 [NA] 346 [AA] 4337378-4338418 putative protein
4035 SEQF4134.2_CP019962.1 SEQF4134.2_04223 open 1038 [NA] 345 [AA] 4338453-4339490 putative ABC transporter permease protein
4036 SEQF4134.2_CP019962.1 SEQF4134.2_04224 open 777 [NA] 258 [AA] 4339490-4340266 putative ABC transporter ATP-binding protein
4037 SEQF4134.2_CP019962.1 SEQF4134.2_04225 open 792 [NA] 263 [AA] 4340281-4341072 hypothetical protein
4038 SEQF4134.2_CP019962.1 SEQF4134.2_04226 open 1257 [NA] 418 [AA] 4341353-4342609 yqcE_16 Inner membrane protein YqcE
4039 SEQF4134.2_CP019962.1 SEQF4134.2_04227 open 1452 [NA] 483 [AA] 4342647-4344098 mtgB_40 Glycine betaine methyltransferase
4040 SEQF4134.2_CP019962.1 SEQF4134.2_04228 open 1386 [NA] 461 [AA] 4344137-4345522 norR_14 Anaerobic nitric oxide reductase transcription regulator NorR
4041 SEQF4134.2_CP019962.1 SEQF4134.2_04229 open 990 [NA] 329 [AA] 4345824-4346813 hypothetical protein
4042 SEQF4134.2_CP019962.1 SEQF4134.2_04230 open 765 [NA] 254 [AA] 4346815-4347579 potA_2 Spermidineputrescine import ATP-binding protein PotA
4043 SEQF4134.2_CP019962.1 SEQF4134.2_04231 open 1581 [NA] 526 [AA] 4347593-4349173 hypothetical protein
4044 SEQF4134.2_CP019962.1 SEQF4134.2_04232 open 1749 [NA] 582 [AA] 4349385-4351133 msbA_3 Lipid A export ATP-bindingpermease protein MsbA
4045 SEQF4134.2_CP019962.1 SEQF4134.2_04233 open 1776 [NA] 591 [AA] 4351126-4352901 putative ABC transporter ATP-binding protein
4046 SEQF4134.2_CP019962.1 SEQF4134.2_04234 open 996 [NA] 331 [AA] 4352966-4353961 rhaR_9 HTH-type transcriptional activator RhaR
4047 SEQF4134.2_CP019962.1 SEQF4134.2_04235 open 1500 [NA] 499 [AA] 4353951-4355450 ykoD_2 Putative HMPthiamine import ATP-binding protein YkoD
4048 SEQF4134.2_CP019962.1 SEQF4134.2_04236 open 735 [NA] 244 [AA] 4355458-4356192 ecfT_3 Energy-coupling factor transporter transmembrane protein EcfT
4049 SEQF4134.2_CP019962.1 SEQF4134.2_04237 open 582 [NA] 193 [AA] 4356192-4356773 hypothetical protein
4050 SEQF4134.2_CP019962.1 SEQF4134.2_04238 open 1887 [NA] 628 [AA] 4356988-4358874 putative ABC transporter ATP-binding protein
4051 SEQF4134.2_CP019962.1 SEQF4134.2_04239 open 1764 [NA] 587 [AA] 4358874-4360637 putative ABC transporter ATP-binding protein
4052 SEQF4134.2_CP019962.1 SEQF4134.2_04240 open 885 [NA] 294 [AA] 4360793-4361677 hcaR_2 Hca operon transcriptional activator HcaR
4053 SEQF4134.2_CP019962.1 SEQF4134.2_04241 open 1407 [NA] 468 [AA] 4361733-4363139 mtgB_41 Glycine betaine methyltransferase
4054 SEQF4134.2_CP019962.1 SEQF4134.2_04242 open 1275 [NA] 424 [AA] 4363163-4364437 yqcE_17 Inner membrane protein YqcE
4055 SEQF4134.2_CP019962.1 SEQF4134.2_04243 open 1305 [NA] 434 [AA] 4364486-4365790 yihN_6 Inner membrane protein YihN
4056 SEQF4134.2_CP019962.1 SEQF4134.2_04244 open 1407 [NA] 468 [AA] 4365868-4367274 mtgB_42 Glycine betaine methyltransferase
4057 SEQF4134.2_CP019962.1 SEQF4134.2_04245 open 702 [NA] 233 [AA] 4367496-4368197 yurK_2 putative HTH-type transcriptional regulator YurK
4058 SEQF4134.2_CP019962.1 SEQF4134.2_04246 open 717 [NA] 238 [AA] 4368194-4368910 hypothetical protein
4059 SEQF4134.2_CP019962.1 SEQF4134.2_04247 open 645 [NA] 214 [AA] 4368883-4369527 metH_17 Methionine synthase
4060 SEQF4134.2_CP019962.1 SEQF4134.2_04248 open 834 [NA] 277 [AA] 4369674-4370507 ecfA3 Energy-coupling factor transporter ATP-binding protein EcfA3
4061 SEQF4134.2_CP019962.1 SEQF4134.2_04249 open 888 [NA] 295 [AA] 4370519-4371406 ecfT_4 Energy-coupling factor transporter transmembrane protein EcfT
4062 SEQF4134.2_CP019962.1 SEQF4134.2_04250 open 321 [NA] 106 [AA] 4371488-4371808 cbiN_2 Cobalt transport protein CbiN
4063 SEQF4134.2_CP019962.1 SEQF4134.2_04251 open 753 [NA] 250 [AA] 4371810-4372562 cbiM_2 Cobalt transport protein CbiM
4064 SEQF4134.2_CP019962.1 SEQF4134.2_04253 open 711 [NA] 236 [AA] 4372983-4373693 hypothetical protein
4065 SEQF4134.2_CP019962.1 SEQF4134.2_04254 open 1158 [NA] 385 [AA] 4373856-4375013 hypothetical protein
4066 SEQF4134.2_CP019962.1 SEQF4134.2_04255 open 135 [NA] 44 [AA] 4375022-4375156 hypothetical protein
4067 SEQF4134.2_CP019962.1 SEQF4134.2_04256 open 543 [NA] 180 [AA] 4375163-4375705 hypothetical protein
4068 SEQF4134.2_CP019962.1 SEQF4134.2_04257 open 387 [NA] 128 [AA] 4375749-4376135 gloA Lactoylglutathione lyase
4069 SEQF4134.2_CP019962.1 SEQF4134.2_04258 open 747 [NA] 248 [AA] 4376150-4376896 recO DNA repair protein RecO
4070 SEQF4134.2_CP019962.1 SEQF4134.2_04259 open 915 [NA] 304 [AA] 4376900-4377814 era_2 GTPase Era
4071 SEQF4134.2_CP019962.1 SEQF4134.2_04260 open 378 [NA] 125 [AA] 4377836-4378213 dgkA Undecaprenol kinase
4072 SEQF4134.2_CP019962.1 SEQF4134.2_04261 open 471 [NA] 156 [AA] 4378242-4378712 ybeY Endoribonuclease YbeY
4073 SEQF4134.2_CP019962.1 SEQF4134.2_04262 open 1002 [NA] 333 [AA] 4378746-4379747 PhoH-like protein
4074 SEQF4134.2_CP019962.1 SEQF4134.2_04263 open 630 [NA] 209 [AA] 4379765-4380394 pspB Putative phosphoserine phosphatase 2
4075 SEQF4134.2_CP019962.1 SEQF4134.2_04264 open 906 [NA] 301 [AA] 4380551-4381456 hypothetical protein
4076 SEQF4134.2_CP019962.1 SEQF4134.2_04265 open 777 [NA] 258 [AA] 4381729-4382505 Protein-ADP-ribose hydrolase
4077 SEQF4134.2_CP019962.1 SEQF4134.2_04266 open 336 [NA] 111 [AA] 4382690-4383025 yybR putative HTH-type transcriptional regulator YybR
4078 SEQF4134.2_CP019962.1 SEQF4134.2_04267 open 258 [NA] 85 [AA] 4383074-4383331 hypothetical protein
4079 SEQF4134.2_CP019962.1 SEQF4134.2_04268 open 1353 [NA] 450 [AA] 4383743-4385095 Butyryl-CoA:acetate CoA-transferase
4080 SEQF4134.2_CP019962.1 SEQF4134.2_04269 open 921 [NA] 306 [AA] 4385234-4386154 hypothetical protein
4081 SEQF4134.2_CP019962.1 SEQF4134.2_04270 open 264 [NA] 87 [AA] 4386268-4386531 hypothetical protein
4082 SEQF4134.2_CP019962.1 SEQF4134.2_04271 open 408 [NA] 135 [AA] 4386549-4386956 hypothetical protein
4083 SEQF4134.2_CP019962.1 SEQF4134.2_04272 open 375 [NA] 124 [AA] 4387029-4387403 hypothetical protein
4084 SEQF4134.2_CP019962.1 SEQF4134.2_04273 open 126 [NA] 41 [AA] 4387585-4387710 hypothetical protein
4085 SEQF4134.2_CP019962.1 SEQF4134.2_04274 open 1164 [NA] 387 [AA] 4387721-4388884 hypothetical protein
4086 SEQF4134.2_CP019962.1 SEQF4134.2_04275 open 1176 [NA] 391 [AA] 4388914-4390089 exuT_2 Hexuronate transporter
4087 SEQF4134.2_CP019962.1 SEQF4134.2_04276 open 651 [NA] 216 [AA] 4390458-4391108 hypothetical protein
4088 SEQF4134.2_CP019962.1 SEQF4134.2_04277 open 537 [NA] 178 [AA] 4391190-4391726 hypothetical protein
4089 SEQF4134.2_CP019962.1 SEQF4134.2_04278 open 870 [NA] 289 [AA] 4392250-4393119 kbaY D-tagatose-1%2C6-bisphosphate aldolase subunit KbaY
4090 SEQF4134.2_CP019962.1 SEQF4134.2_04279 open 372 [NA] 123 [AA] 4393122-4393493 hypothetical protein
4091 SEQF4134.2_CP019962.1 SEQF4134.2_04280 open 1257 [NA] 418 [AA] 4393498-4394754 Ferredoxin--NADP reductase
4092 SEQF4134.2_CP019962.1 SEQF4134.2_04281 open 1449 [NA] 482 [AA] 4394768-4396216 lhgD_9 L-2-hydroxyglutarate dehydrogenase
4093 SEQF4134.2_CP019962.1 SEQF4134.2_04282 open 759 [NA] 252 [AA] 4396400-4397158 fabG_4 3-oxoacyl-[acyl-carrier-protein] reductase FabG
4094 SEQF4134.2_CP019962.1 SEQF4134.2_04283 open 1500 [NA] 499 [AA] 4397811-4399310 lyx_3 L-xylulose3-keto-L-gulonate kinase
4095 SEQF4134.2_CP019962.1 SEQF4134.2_04284 open 555 [NA] 184 [AA] 4399522-4400076 glpP_4 Glycerol uptake operon antiterminator regulatory protein
4096 SEQF4134.2_CP019962.1 SEQF4134.2_04285 open 1485 [NA] 494 [AA] 4400298-4401782 glpK_7 Glycerol kinase
4097 SEQF4134.2_CP019962.1 SEQF4134.2_04286 open 768 [NA] 255 [AA] 4402096-4402863 zupT_2 Zinc transporter ZupT
4098 SEQF4134.2_CP019962.1 SEQF4134.2_04287 open 321 [NA] 106 [AA] 4403003-4403323 hypothetical protein
4099 SEQF4134.2_CP019962.1 SEQF4134.2_04288 open 372 [NA] 123 [AA] 4403485-4403856 hypothetical protein
4100 SEQF4134.2_CP019962.1 SEQF4134.2_04289 open 789 [NA] 262 [AA] 4403877-4404665 rnhB Ribonuclease HII
4101 SEQF4134.2_CP019962.1 SEQF4134.2_04290 open 831 [NA] 276 [AA] 4404652-4405482 rbgA Ribosome biogenesis GTPase A
4102 SEQF4134.2_CP019962.1 SEQF4134.2_04291 open 540 [NA] 179 [AA] 4405484-4406023 sipT Signal peptidase I T
4103 SEQF4134.2_CP019962.1 SEQF4134.2_04292 open 342 [NA] 113 [AA] 4406077-4406418 rplS 50S ribosomal protein L19
4104 SEQF4134.2_CP019962.1 SEQF4134.2_04293 open 621 [NA] 206 [AA] 4406560-4407180 hypothetical protein
4105 SEQF4134.2_CP019962.1 SEQF4134.2_04294 open 228 [NA] 75 [AA] 4407188-4407415 hypothetical protein
4106 SEQF4134.2_CP019962.1 SEQF4134.2_04295 open 189 [NA] 62 [AA] 4407439-4407627 hypothetical protein
4107 SEQF4134.2_CP019962.1 SEQF4134.2_04296 open 159 [NA] 52 [AA] 4407681-4407839 hypothetical protein
4108 SEQF4134.2_CP019962.1 SEQF4134.2_04297 open 162 [NA] 53 [AA] 4407832-4407993 hypothetical protein
4109 SEQF4134.2_CP019962.1 SEQF4134.2_04298 open 777 [NA] 258 [AA] 4408399-4409175 hypothetical protein
4110 SEQF4134.2_CP019962.1 SEQF4134.2_04299 open 789 [NA] 262 [AA] 4409199-4409987 hypothetical protein
4111 SEQF4134.2_CP019962.1 SEQF4134.2_04300 open 993 [NA] 330 [AA] 4410101-4411093 hypothetical protein
4112 SEQF4134.2_CP019962.1 SEQF4134.2_04301 open 285 [NA] 94 [AA] 4411093-4411377 hypothetical protein
4113 SEQF4134.2_CP019962.1 SEQF4134.2_04302 open 264 [NA] 87 [AA] 4411367-4411630 hypothetical protein
4114 SEQF4134.2_CP019962.1 SEQF4134.2_04303 open 411 [NA] 136 [AA] 4411674-4412084 hypothetical protein
4115 SEQF4134.2_CP019962.1 SEQF4134.2_04304 open 336 [NA] 111 [AA] 4412088-4412423 hypothetical protein
4116 SEQF4134.2_CP019962.1 SEQF4134.2_04305 open 261 [NA] 86 [AA] 4412423-4412683 hypothetical protein
4117 SEQF4134.2_CP019962.1 SEQF4134.2_04306 open 246 [NA] 81 [AA] 4412685-4412930 hypothetical protein
4118 SEQF4134.2_CP019962.1 SEQF4134.2_04307 open 4272 [NA] 1423 [AA] 4412945-4417216 hypothetical protein
4119 SEQF4134.2_CP019962.1 SEQF4134.2_04308 open 546 [NA] 181 [AA] 4417392-4417937 hypothetical protein
4120 SEQF4134.2_CP019962.1 SEQF4134.2_04309 open 402 [NA] 133 [AA] 4417989-4418390 hypothetical protein
4121 SEQF4134.2_CP019962.1 SEQF4134.2_04310 open 240 [NA] 79 [AA] 4418451-4418690 hypothetical protein
4122 SEQF4134.2_CP019962.1 SEQF4134.2_04311 open 330 [NA] 109 [AA] 4419956-4420285 hypothetical protein
4123 SEQF4134.2_CP019962.1 SEQF4134.2_04312 open 252 [NA] 83 [AA] 4420344-4420595 hypothetical protein
4124 SEQF4134.2_CP019962.1 SEQF4134.2_04313 open 90 [NA] 29 [AA] 4421301-4421390 hypothetical protein
4125 SEQF4134.2_CP019962.1 SEQF4134.2_04314 open 558 [NA] 185 [AA] 4421399-4421956 hypothetical protein
4126 SEQF4134.2_CP019962.1 SEQF4134.2_04315 open 339 [NA] 112 [AA] 4421970-4422308 hypothetical protein
4127 SEQF4134.2_CP019962.1 SEQF4134.2_04316 open 258 [NA] 85 [AA] 4422305-4422562 hypothetical protein