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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Gardnerella vaginalis UMB0913 (SEQF7998.1)
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PROKKA Annotation for SEQF7998.1
Genome selected: Gardnerella vaginalis UMB0913
Contigs:4 Bases:1513612 bps
CDS:1131 rRNA:3
tmRNA:1 tRNA:45
Annotation Table [page:3]
Number of Records Found: 1131 [3 Pages]
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# Molecule PID Genome
Viewer		 NA (Length)(Seq)
 AA (Length)(Seq)
 Range Gene Gene Product
1001 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01055 open 1092 [NA] 363 [AA] 1316221-1317312 rmlB dTDP-glucose 4%2C6-dehydratase
1002 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01057 open 1236 [NA] 411 [AA] 1317736-1318971 glf UDP-galactopyranose mutase
1003 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01058 open 2145 [NA] 714 [AA] 1319087-1321231 glfT2 Galactofuranosyltransferase GlfT2
1004 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01059 open 1308 [NA] 435 [AA] 1321282-1322589 btuD_11 Vitamin B12 import ATP-binding protein BtuD
1005 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01060 open 837 [NA] 278 [AA] 1322644-1323480 tagG Teichoic acid translocation permease protein TagG
1006 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01061 open 2316 [NA] 771 [AA] 1323585-1325900 arnC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
1007 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01062 open 981 [NA] 326 [AA] 1325964-1326944 ykoT putative glycosyltransferase YkoT
1008 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01063 open 1635 [NA] 544 [AA] 1327031-1328665 hypothetical protein
1009 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01064 open 966 [NA] 321 [AA] 1328600-1329565 hypothetical protein
1010 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01065 open 1797 [NA] 598 [AA] 1329663-1331459 thiK Thiamine kinase
1011 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01066 open 1131 [NA] 376 [AA] 1331776-1332906 hypothetical protein
1012 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01067 open 2184 [NA] 727 [AA] 1333184-1335367 hypothetical protein
1013 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01068 open 1701 [NA] 566 [AA] 1335693-1337393 hypothetical protein
1014 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01070 open 483 [NA] 160 [AA] 1337727-1338209 acpS Holo-[acyl-carrier-protein] synthase
1015 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01071 open 339 [NA] 112 [AA] 1338445-1338783 hypothetical protein
1016 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01072 open 243 [NA] 80 [AA] 1338798-1339040 hypothetical protein
1017 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01073 open 9360 [NA] 3119 [AA] 1339809-1349168 hypothetical protein
1018 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01074 open 9573 [NA] 3190 [AA] 1349543-1359115 hypothetical protein
1019 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01075 open 1647 [NA] 548 [AA] 1359244-1360890 accD5 putative propionyl-CoA carboxylase beta chain 5
1020 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01076 open 1905 [NA] 634 [AA] 1360887-1362791 accA1 Acetyl-propionyl-coenzyme A carboxylase alpha chain
1021 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01077 open 651 [NA] 216 [AA] 1362997-1363647 hypothetical protein
1022 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01078 open 903 [NA] 300 [AA] 1364056-1364958 birA Bifunctional ligaserepressor BirA
1023 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01079 open 2031 [NA] 676 [AA] 1365061-1367091 hypothetical protein
1024 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01080 open 1347 [NA] 448 [AA] 1367107-1368453 hypothetical protein
1025 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01081 open 462 [NA] 153 [AA] 1368575-1369036 hypothetical protein
1026 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01082 open 1434 [NA] 477 [AA] 1369449-1370882 hypothetical protein
1027 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01083 open 861 [NA] 286 [AA] 1371334-1372194 hypothetical protein
1028 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01084 open 696 [NA] 231 [AA] 1373036-1373731 rplA 50S ribosomal protein L1
1029 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01085 open 432 [NA] 143 [AA] 1373746-1374177 rplK 50S ribosomal protein L11
1030 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01086 open 933 [NA] 310 [AA] 1374689-1375621 hypothetical protein
1031 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01087 open 1368 [NA] 455 [AA] 1375968-1377335 hypothetical protein
1032 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01088 open 141 [NA] 46 [AA] 1377452-1377592 hypothetical protein
1033 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01089 open 1011 [NA] 336 [AA] 1377522-1378532 hypothetical protein
1034 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01090 open 1908 [NA] 635 [AA] 1379387-1381294 Fimbrial subunit type 1
1035 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01091 open 2373 [NA] 790 [AA] 1381537-1383909 hypothetical protein
1036 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01092 open 912 [NA] 303 [AA] 1384243-1385154 nusG Transcription terminationantitermination protein NusG
1037 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01093 open 228 [NA] 75 [AA] 1385196-1385423 secE Protein translocase subunit SecE
1038 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01095 open 1239 [NA] 412 [AA] 1385693-1386931 aspC1 Aspartate aminotransferase
1039 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01096 open 1146 [NA] 381 [AA] 1387251-1388396 proB Glutamate 5-kinase
1040 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01097 open 1683 [NA] 560 [AA] 1388422-1390104 obg GTPase Obg
1041 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01098 open 252 [NA] 83 [AA] 1390252-1390503 rpmA 50S ribosomal protein L27
1042 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01099 open 309 [NA] 102 [AA] 1390537-1390845 rplU 50S ribosomal protein L21
1043 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01100 open 3282 [NA] 1093 [AA] 1391020-1394301 rne Ribonuclease E
1044 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01101 open 942 [NA] 313 [AA] 1394696-1395637 hypothetical protein
1045 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01102 open 1440 [NA] 479 [AA] 1395859-1397298 dTTPUTP pyrophosphatase
1046 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01103 open 1077 [NA] 358 [AA] 1397332-1398408 thrB Homoserine kinase
1047 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01104 open 1374 [NA] 457 [AA] 1398427-1399800 hom Homoserine dehydrogenase
1048 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01105 open 993 [NA] 330 [AA] 1399861-1400853 hypothetical protein
1049 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01106 open 1143 [NA] 380 [AA] 1400955-1402097 ddl D-alanine--D-alanine ligase
1050 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01107 open 996 [NA] 331 [AA] 1402170-1403165 gpsA Glycerol-3-phosphate dehydrogenase [NAD(P)+]
1051 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01108 open 885 [NA] 294 [AA] 1403307-1404191 hypothetical protein
1052 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01109 open 864 [NA] 287 [AA] 1404212-1405075 mntB_2 Manganese transport system membrane protein MntB
1053 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01110 open 822 [NA] 273 [AA] 1405075-1405896 btuD_12 Vitamin B12 import ATP-binding protein BtuD
1054 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01111 open 1749 [NA] 582 [AA] 1405884-1407632 hypothetical protein
1055 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01112 open 2229 [NA] 742 [AA] 1407677-1409905 hypothetical protein
1056 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01113 open 1203 [NA] 400 [AA] 1409886-1411088 hypothetical protein
1057 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01114 open 2295 [NA] 764 [AA] 1411123-1413417 hypothetical protein
1058 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01115 open 555 [NA] 184 [AA] 1413668-1414222 pncA Nicotinamidasepyrazinamidase
1059 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01116 open 477 [NA] 158 [AA] 1414648-1415124 hypothetical protein
1060 SEQF7998.1_PKHB01000001.1 SEQF7998.1_01117 open 1251 [NA] 416 [AA] 1415213-1416463 hypothetical protein
1061 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01118 open 816 [NA] 271 [AA] 227-1042 hypothetical protein
1062 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01119 open 2634 [NA] 877 [AA] 1066-3699 kup Low affinity potassium transport system protein kup
1063 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01120 open 981 [NA] 326 [AA] 3864-4844 dtd3 D-aminoacyl-tRNA deacylase
1064 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01121 open 1797 [NA] 598 [AA] 4899-6695 putative ABC transporter ATP-binding protein
1065 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01122 open 1815 [NA] 604 [AA] 6698-8512 Putative multidrug export ATP-bindingpermease protein
1066 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01123 open 1743 [NA] 580 [AA] 8692-10434 putative protein
1067 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01124 open 1890 [NA] 629 [AA] 10758-12647 putative ABC transporter ATP-binding protein
1068 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01125 open 948 [NA] 315 [AA] 12669-13616 Putative peptide transport permease protein
1069 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01126 open 984 [NA] 327 [AA] 13641-14624 Putative peptide transport permease protein
1070 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01127 open 1542 [NA] 513 [AA] 15085-16626 pepC_2 Aminopeptidase C
1071 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01128 open 1872 [NA] 623 [AA] 16971-18842 metG Methionine--tRNA ligase
1072 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01129 open 627 [NA] 208 [AA] 19147-19773 hypothetical protein
1073 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01130 open 264 [NA] 87 [AA] 19764-20027 hypothetical protein
1074 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01131 open 903 [NA] 300 [AA] 20059-20961 rsmI Ribosomal RNA small subunit methyltransferase I
1075 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01132 open 843 [NA] 280 [AA] 21091-21933 hypothetical protein
1076 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01133 open 1518 [NA] 505 [AA] 22149-23666 fhs Formate--tetrahydrofolate ligase
1077 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01134 open 1608 [NA] 535 [AA] 23895-25502 pepD Dipeptidase
1078 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01135 open 552 [NA] 183 [AA] 25614-26165 hypothetical protein
1079 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01136 open 1533 [NA] 510 [AA] 26389-27921 ulaA_2 Ascorbate-specific PTS system EIIC component
1080 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01137 open 270 [NA] 89 [AA] 28038-28307 ulaB Ascorbate-specific PTS system EIIB component
1081 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01138 open 450 [NA] 149 [AA] 28371-28820 hypothetical protein
1082 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01139 open 1659 [NA] 552 [AA] 28925-30583 ptsI Phosphoenolpyruvate-protein phosphotransferase
1083 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01140 open 267 [NA] 88 [AA] 30859-31125 ptsH Phosphocarrier protein HPr
1084 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01141 open 1080 [NA] 359 [AA] 31225-32304 galR HTH-type transcriptional regulator GalR
1085 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01142 open 1179 [NA] 392 [AA] 32317-33495 hypothetical protein
1086 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01143 open 705 [NA] 234 [AA] 33550-34254 tmk Thymidylate kinase
1087 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01144 open 2856 [NA] 951 [AA] 34301-37156 topA DNA topoisomerase 1
1088 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01145 open 1326 [NA] 441 [AA] 37288-38613 hypothetical protein
1089 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01147 open 1143 [NA] 380 [AA] 38797-39939 ino1 Inositol-3-phosphate synthase
1090 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01148 open 2325 [NA] 774 [AA] 40112-42436 ponA1_2 Penicillin-binding protein 1A
1091 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01149 open 744 [NA] 247 [AA] 42553-43296 gph Phosphoglycolate phosphatase
1092 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01150 open 597 [NA] 198 [AA] 43447-44043 hypothetical protein
1093 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01151 open 1053 [NA] 350 [AA] 44131-45183 cbpA Curved DNA-binding protein
1094 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01152 open 696 [NA] 231 [AA] 45310-46005 grpE Protein GrpE
1095 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01153 open 1884 [NA] 627 [AA] 46005-47888 dnaK Chaperone protein DnaK
1096 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01154 open 732 [NA] 243 [AA] 48156-48887 moeZ putative adenylyltransferasesulfurtransferase MoeZ
1097 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01155 open 813 [NA] 270 [AA] 48924-49736 thiG_2 Thiazole synthase
1098 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01156 open 207 [NA] 68 [AA] 49826-50032 hypothetical protein
1099 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01157 open 1071 [NA] 356 [AA] 50155-51225 thiO Glycine oxidase
1100 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01159 open 2841 [NA] 946 [AA] 51993-54833 hypothetical protein
1101 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01160 open 912 [NA] 303 [AA] 54867-55778 araQ_2 L-arabinose transport system permease protein AraQ
1102 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01161 open 936 [NA] 311 [AA] 55775-56710 ngcF Diacetylchitobiose uptake system permease protein NgcF
1103 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01162 open 1386 [NA] 461 [AA] 56758-58143 hypothetical protein
1104 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01163 open 1026 [NA] 341 [AA] 58417-59442 cytR_2 HTH-type transcriptional repressor CytR
1105 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01164 open 837 [NA] 278 [AA] 59591-60427 hypothetical protein
1106 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01165 open 1701 [NA] 566 [AA] 60505-62205 treS Trehalose synthaseamylase TreS
1107 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01166 open 1230 [NA] 409 [AA] 62464-63693 cycB Cyclodextrin-binding protein
1108 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01167 open 1407 [NA] 468 [AA] 63853-65259 hypothetical protein
1109 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01168 open 924 [NA] 307 [AA] 65256-66179 dasC Diacetylchitobiose uptake system permease protein DasC
1110 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01169 open 2010 [NA] 669 [AA] 66492-68501 pulA Pullulanase
1111 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01170 open 2250 [NA] 749 [AA] 68779-71028 malQ_2 4-alpha-glucanotransferase
1112 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01171 open 612 [NA] 203 [AA] 71212-71823 hypothetical protein
1113 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01172 open 834 [NA] 277 [AA] 72012-72845 ngcG Diacetylchitobiose uptake system permease protein NgcG
1114 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01173 open 843 [NA] 280 [AA] 72842-73684 melD Melibioseraffinosestachyose import permease protein MelD
1115 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01174 open 1014 [NA] 337 [AA] 73996-75009 cytR_3 HTH-type transcriptional repressor CytR
1116 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01175 open 1344 [NA] 447 [AA] 75172-76515 hypothetical protein
1117 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01177 open 711 [NA] 236 [AA] 76876-77586 gpm2 Acid phosphatase
1118 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01178 open 459 [NA] 152 [AA] 77756-78214 hypothetical protein
1119 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01179 open 783 [NA] 260 [AA] 78283-79065 nfrA1 FMN reductase (NADPH)
1120 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01180 open 1572 [NA] 523 [AA] 79651-81222 dapL LL-diaminopimelate aminotransferase
1121 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01181 open 414 [NA] 137 [AA] 81358-81771 hypothetical protein
1122 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01182 open 843 [NA] 280 [AA] 81777-82619 hypothetical protein
1123 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01183 open 525 [NA] 174 [AA] 82664-83188 hypothetical protein
1124 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01184 open 1212 [NA] 403 [AA] 83216-84427 macB_2 Macrolide export ATP-bindingpermease protein MacB
1125 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01185 open 705 [NA] 234 [AA] 84411-85115 yknY putative ABC transporter ATP-binding protein YknY
1126 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01186 open 903 [NA] 300 [AA] 85118-86020 hypothetical protein
1127 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01187 open 672 [NA] 223 [AA] 86496-87167 liaR Transcriptional regulatory protein LiaR
1128 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01188 open 1161 [NA] 386 [AA] 87164-88324 hypothetical protein
1129 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01189 open 372 [NA] 123 [AA] 88486-88857 hypothetical protein
1130 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01190 open 282 [NA] 93 [AA] 89038-89319 hypothetical protein
1131 SEQF7998.1_PKHB01000002.1 SEQF7998.1_01191 open 720 [NA] 239 [AA] 89410-90129 cnbA Chloronitrobenzene nitroreductase