Genome Explorer: Yersinia pestis CA88-4125 (SEQF1556.2)
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NCBI Annotation for SEQF1556.2
| Genome selected: Yersinia pestis CA88-4125 | |||
| Contigs: | 10 | Bases: | 4825390 bps |
| CDS: | 129 | rRNA: | 21 |
| tmRNA: | 1 | tRNA: | 67 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 4001 | CP000722.1 | ABR14840.1 JB | 1065 [NA] | 354 [AA] | 41937-43001 | YPE_4207 | putative type III secretion protein |
| 4002 | CP000722.1 | ABR14841.1 JB | 786 [NA] | 261 [AA] | 43001-43786 | YPE_4208 | putative type III secretion protein |
| 4003 | CP000722.1 | ABR14842.1 JB | 267 [NA] | 88 [AA] | 43783-44049 | YPE_4209 | putative type III secretion protein |
| 4004 | CP000722.1 | ABR14843.1 JB | 654 [NA] | 217 [AA] | 44051-44704 | YPE_4210 | putative Yop secretion membrane protein |
| 4005 | CP000722.1 | ABR14844.1 JB | 924 [NA] | 307 [AA] | 44701-45624 | YPE_4211 | putative type III secretion protein |
| 4006 | CP000722.1 | ABR14845.1 JB | 1368 [NA] | 455 [AA] | 45621-46988 | YPE_4212 | regulator of needle length for Type III secretion |
| 4007 | CP000722.1 | ABR14846.1 JB | 465 [NA] | 154 [AA] | 46988-47452 | YPE_4213 | putative type III secretion protein |
| 4008 | CP000722.1 | ABR14847.1 JB | 1320 [NA] | 439 [AA] | 47449-48768 | YPE_4214 | ATPase for protein unfolding and Type III secretion |
| 4009 | CP000722.1 | ABR14848.1 JB | 882 [NA] | 293 [AA] | 48966-49847 | YPE_4215 | regulator of Yop secretion, itself secreted |
| 4010 | CP000722.1 | ABR14849.1 JB | 279 [NA] | 92 [AA] | 49828-50106 | YPE_4216 | regulator of YopN secretion |
| 4011 | CP000722.1 | ABR14850.1 JB | 372 [NA] | 123 [AA] | 50093-50464 | YPE_4217 | chaperone for YopN |
| 4012 | CP000722.1 | ABR14851.1 JB | 369 [NA] | 122 [AA] | 50461-50829 | YPE_4218 | putative type III secretion protein |
| 4013 | CP000722.1 | ABR14852.1 JB | 345 [NA] | 114 [AA] | 50826-51170 | YPE_4219 | putative type III secretion protein |
| 4014 | CP000722.1 | ABR14853.1 JB | 2115 [NA] | 704 [AA] | 51157-53271 | YPE_4220 | putative membrane-bound Yop protein |
| 4015 | CP000722.1 | ABR14854.1 JB | 441 [NA] | 146 [AA] | 53268-53708 | YPE_4221 | hypothetical protein lcrR |
| 4016 | CP000722.1 | ABR14855.1 JB | 288 [NA] | 95 [AA] | 53750-54037 | YPE_4222 | putative Yop regulator |
| 4017 | CP000722.1 | ABR14856.1 JB | 981 [NA] | 326 [AA] | 54039-55019 | YPE_4223 | V antigen |
| 4018 | CP000722.1 | ABR14857.1 JB | 507 [NA] | 168 [AA] | 55032-55538 | YPE_4224 | putative yopB/yopD chaperone |
| 4019 | CP000722.1 | ABR14858.1 JB | 1206 [NA] | 401 [AA] | 55516-56721 | YPE_4225 | putative secreted pore/translocation protein |
| 4020 | CP000722.1 | ABR14859.1 JB | 921 [NA] | 306 [AA] | 56740-57660 | YPE_4226 | putative secreted pore/translocation protein |
| 4021 | CP000722.1 | ABR14860.1 JB | 1230 [NA] | 409 [AA] | 59389-60618 | YPE_4227 | leucine-rich 15-repeat translocated effector protein |
| 4022 | CP000722.1 | ABR14861.1 JB | 420 [NA] | 139 [AA] | 61854-62273 | YPE_4229 | hypothetical protein YPCD1.23 |
| 4023 | CP000722.1 | ABR14862.1 JB | 390 [NA] | 129 [AA] | 62545-62934 | YPE_4230 | hypothetical protein YPCD1.22c |
| 4024 | CP000722.1 | ABR14863.1 JB | 399 [NA] | 132 [AA] | 62978-63376 | YPE_4231 | putative yopT chaperone |
| 4025 | CP000722.1 | ABR14864.1 JB | 969 [NA] | 322 [AA] | 63376-64344 | YPE_4232 | Translocated cysteine protease/Rho GTPase toxin |
| 4026 | CP000722.1 | ABR14865.1 JB | 549 [NA] | 182 [AA] | 64844-65392 | YPE_4233 | secreted targeting protein, possible regulator, Type III system |
| 4027 | CP000722.1 | ABR14866.1 JB | 324 [NA] | 107 [AA] | 66720-67043 | YPE_4236 | hypothetical protein YPCD1.16c |
| 4028 | CP000722.1 | ABR14867.1 JB | 459 [NA] | 152 [AA] | 67067-67525 | YPE_4237 | hypothetical protein YPCD1.15c |
| 4029 | CP000722.1 | ABR14868.1 JB | 1167 [NA] | 388 [AA] | 68631-69797 | YPE_4238 | putative plasmid partitioning transcription repressor |
| 4030 | CP000722.1 | BAF-0004076 JB | 648 [NA] | [AA] | 3698-4345 | YPE_4154 | |
| 4031 | CP000722.1 | BAF-0004077 JB | 249 [NA] | [AA] | 4445-4693 | YPE_4155 | |
| 4032 | CP000722.1 | BAF-0004088 JB | 381 [NA] | [AA] | 14100-14480 | YPE_4166 | |
| 4033 | CP000722.1 | BAF-0004089 JB | 294 [NA] | [AA] | 16715-17008 | YPE_4170 | |
| 4034 | CP000722.1 | BAF-0004096 JB | 117 [NA] | [AA] | 22470-22586 | YPE_4180 | |
| 4035 | CP000722.1 | BAF-0004100 JB | 99 [NA] | [AA] | 27199-27297 | YPE_4184 | |
| 4036 | CP000722.1 | BAF-0004101 JB | 582 [NA] | [AA] | 27329-27910 | YPE_4185 | |
| 4037 | CP000722.1 | BAF-0004102 JB | 207 [NA] | [AA] | 27937-28143 | YPE_4186 | |
| 4038 | CP000722.1 | BAF-0004143 JB | 318 [NA] | [AA] | 60661-60978 | YPE_4228 | |
| 4039 | CP000722.1 | BAF-0004315 JB | 279 [NA] | [AA] | 30053-30331 | YPE_4188 | |
| 4040 | CP000722.1 | BAF-0004406 JB | 158 [NA] | [AA] | 16459-16616 | YPE_4169 | |
| 4041 | CP000722.1 | BAF-0004408 JB | 249 [NA] | [AA] | 18848-19096 | YPE_4175 | |
| 4042 | CP000722.1 | BAF-0004410 JB | 739 [NA] | [AA] | 65881-66619 | YPE_4235 | |
| 4043 | CP000723.1 | ABR14869.1 JB | 1206 [NA] | 401 [AA] | 95021-16 | YPE_4340 | putative partitioning protein A |
| 4044 | CP000723.1 | ABR14870.1 JB | 972 [NA] | 323 [AA] | 13-984 | YPE_4240 | putative partitioning protein B |
| 4045 | CP000723.1 | ABR14871.1 JB | 1398 [NA] | 465 [AA] | 1363-2760 | YPE_4241 | putative DNA-binding protein |
| 4046 | CP000723.1 | ABR14872.1 JB | 309 [NA] | 102 [AA] | 2922-3230 | YPE_4242 | hypothetical protein YPMT1.65 |
| 4047 | CP000723.1 | ABR14873.1 JB | 678 [NA] | 225 [AA] | 3623-4300 | YPE_4243 | putative DNA methylase |
| 4048 | CP000723.1 | ABR14874.1 JB | 222 [NA] | 73 [AA] | 4300-4521 | YPE_4244 | hypothetical protein YPMT1.63Ac |
| 4049 | CP000723.1 | ABR14875.1 JB | 492 [NA] | 163 [AA] | 4460-4951 | YPE_4245 | hypothetical protein YPMT1.63c |
| 4050 | CP000723.1 | ABR14876.1 JB | 780 [NA] | 259 [AA] | 5005-5784 | YPE_4246 | hypothetical protein YPMT1.62c |
| 4051 | CP000723.1 | ABR14877.1 JB | 507 [NA] | 168 [AA] | 6183-6689 | YPE_4247 | putative antirestriction protein |
| 4052 | CP000723.1 | ABR14878.1 JB | 231 [NA] | 76 [AA] | 7402-7632 | YPE_4248 | hypothetical protein YPMT1.60c |
| 4053 | CP000723.1 | ABR14879.1 JB | 2010 [NA] | 669 [AA] | 7705-9714 | YPE_4249 | putative DNA-binding protein |
| 4054 | CP000723.1 | ABR14880.1 JB | 1023 [NA] | 340 [AA] | 9838-10860 | YPE_4250 | putative transposase |
| 4055 | CP000723.1 | ABR14881.1 JB | 783 [NA] | 260 [AA] | 10857-11639 | YPE_4251 | putative IS100 transposase |
| 4056 | CP000723.1 | ABR14882.1 JB | 444 [NA] | 147 [AA] | 12191-12634 | YPE_4252 | hypothetical protein YPMT1.55c |
| 4057 | CP000723.1 | ABR14883.1 JB | 564 [NA] | 187 [AA] | 12664-13227 | YPE_4253 | hypothetical protein YPMT1.54 |
| 4058 | CP000723.1 | ABR14884.1 JB | 474 [NA] | 157 [AA] | 13730-14203 | YPE_4254 | hypothetical protein YPMT1.53c |
| 4059 | CP000723.1 | ABR14885.1 JB | 1029 [NA] | 342 [AA] | 14323-15351 | YPE_4255 | hypothetical protein YPMT1.52c |
| 4060 | CP000723.1 | ABR14886.1 JB | 945 [NA] | 314 [AA] | 15412-16356 | YPE_4256 | putative exonuclease |
| 4061 | CP000723.1 | ABR14887.1 JB | 267 [NA] | 88 [AA] | 16356-16622 | YPE_4257 | hypothetical protein YPMT1.50Ac |
| 4062 | CP000723.1 | ABR14888.1 JB | 1077 [NA] | 358 [AA] | 16625-17701 | YPE_4258 | putative recombinase |
| 4063 | CP000723.1 | ABR14889.1 JB | 201 [NA] | 66 [AA] | 17792-17992 | YPE_4259 | hypothetical protein YPMT1.49Ac |
| 4064 | CP000723.1 | ABR14890.1 JB | 831 [NA] | 276 [AA] | 17996-18826 | YPE_4260 | putative lipoprotein |
| 4065 | CP000723.1 | ABR14891.1 JB | 372 [NA] | 123 [AA] | 18980-19351 | YPE_4261 | hypothetical protein YPMT1.48c |
| 4066 | CP000723.1 | ABR14892.1 JB | 411 [NA] | 136 [AA] | 19335-19745 | YPE_4262 | hypothetical protein YPMT1.47c |
| 4067 | CP000723.1 | ABR14893.1 JB | 276 [NA] | 91 [AA] | 19813-20088 | YPE_4263 | hypothetical protein YPMT1.46Bc |
| 4068 | CP000723.1 | ABR14894.1 JB | 180 [NA] | 59 [AA] | 20129-20308 | YPE_4264 | hypothetical protein YPMT1.46Ac |
| 4069 | CP000723.1 | ABR14895.1 JB | 336 [NA] | 111 [AA] | 20305-20640 | YPE_4265 | hypothetical protein YPMT1.46c |
| 4070 | CP000723.1 | ABR14896.1 JB | 216 [NA] | 71 [AA] | 20637-20852 | YPE_4266 | hypothetical protein YPMT1.45c |
| 4071 | CP000723.1 | ABR14897.1 JB | 1065 [NA] | 354 [AA] | 21421-22485 | YPE_4267 | putative replication protein A |
| 4072 | CP000723.1 | ABR14898.1 JB | 645 [NA] | 214 [AA] | 23230-23874 | YPE_4268 | hypothetical protein YPMT1.43c |
| 4073 | CP000723.1 | ABR14899.1 JB | 147 [NA] | 48 [AA] | 23950-24096 | YPE_4269 | hypothetical protein YPMT1.42Ac |
| 4074 | CP000723.1 | ABR14900.1 JB | 1023 [NA] | 340 [AA] | 24234-25256 | YPE_4270 | putative periplasmic protein |
| 4075 | CP000723.1 | ABR14901.1 JB | 1086 [NA] | 361 [AA] | 25672-26757 | YPE_4271 | putative exonuclease subunit 1 |
| 4076 | CP000723.1 | ABR14902.1 JB | 225 [NA] | 74 [AA] | 26754-26978 | YPE_4272 | hypothetical protein YPMT1.40Ac |
| 4077 | CP000723.1 | ABR14903.1 JB | 1917 [NA] | 638 [AA] | 26987-28903 | YPE_4273 | putative exonuclease subunit 2 |
| 4078 | CP000723.1 | ABR14904.1 JB | 747 [NA] | 248 [AA] | 28893-29639 | YPE_4274 | hypothetical protein YPMT1.39c |
| 4079 | CP000723.1 | ABR14905.1 JB | 570 [NA] | 189 [AA] | 29652-30221 | YPE_4275 | hypothetical protein YPMT1.38c |
| 4080 | CP000723.1 | ABR14906.1 JB | 459 [NA] | 152 [AA] | 30430-30888 | YPE_4276 | putative transposase |
| 4081 | CP000723.1 | ABR14907.1 JB | 288 [NA] | 95 [AA] | 31082-31369 | YPE_4277 | hypothetical protein YPMT1.36c |
| 4082 | CP000723.1 | ABR14908.1 JB | 483 [NA] | 160 [AA] | 31575-32057 | YPE_4278 | hypothetical protein YPMT1.35c |
| 4083 | CP000723.1 | ABR14909.1 JB | 228 [NA] | 75 [AA] | 32696-32923 | YPE_4279 | hypothetical protein YPMT1.34A |
| 4084 | CP000723.1 | ABR14910.1 JB | 651 [NA] | 216 [AA] | 33008-33658 | YPE_4280 | hypothetical protein YPMT1.34 |
| 4085 | CP000723.1 | ABR14911.1 JB | 528 [NA] | 175 [AA] | 33980-34507 | YPE_4281 | putative transcriptional regulator |
| 4086 | CP000723.1 | ABR14912.1 JB | 423 [NA] | 140 [AA] | 34512-34934 | YPE_4282 | putative lipoprotein |
| 4087 | CP000723.1 | ABR14913.1 JB | 279 [NA] | 92 [AA] | 34994-35272 | YPE_4283 | hypothetical protein YPMT1.31 |
| 4088 | CP000723.1 | ABR14914.1 JB | 1560 [NA] | 519 [AA] | 35275-36834 | YPE_4284 | hypothetical protein YPMT1.30 |
| 4089 | CP000723.1 | ABR14915.1 JB | 699 [NA] | 232 [AA] | 36899-37597 | YPE_4285 | hypothetical protein YPMT1.29c |
| 4090 | CP000723.1 | ABR14916.1 JB | 669 [NA] | 222 [AA] | 37597-38265 | YPE_4286 | hypothetical protein YPMT1.28c |
| 4091 | CP000723.1 | ABR14917.1 JB | 699 [NA] | 232 [AA] | 38202-38900 | YPE_4287 | putative ABC transporter ATP-binding protein |
| 4092 | CP000723.1 | ABR14918.1 JB | 255 [NA] | 84 [AA] | 38893-39147 | YPE_4288 | hypothetical protein YPMT1.26Ac |
| 4093 | CP000723.1 | ABR14919.1 JB | 900 [NA] | 299 [AA] | 39144-40043 | YPE_4289 | hypothetical protein YPMT1.26c |
| 4094 | CP000723.1 | ABR14920.1 JB | 267 [NA] | 88 [AA] | 40053-40319 | YPE_4290 | hypothetical protein YPMT1.25Ac |
| 4095 | CP000723.1 | ABR14921.1 JB | 642 [NA] | 213 [AA] | 40515-41156 | YPE_4291 | hypothetical protein YPMT1.25c |
| 4096 | CP000723.1 | ABR14922.1 JB | 1257 [NA] | 418 [AA] | 41159-42415 | YPE_4292 | hypothetical protein YPMT1.24c |
| 4097 | CP000723.1 | ABR14923.1 JB | 1590 [NA] | 529 [AA] | 42434-44023 | YPE_4293 | hypothetical protein YPMT1.23c |
| 4098 | CP000723.1 | ABR14924.1 JB | 834 [NA] | 277 [AA] | 44046-44879 | YPE_4294 | hypothetical protein YPMT1.22c |
| 4099 | CP000723.1 | ABR14925.1 JB | 876 [NA] | 291 [AA] | 44906-45781 | YPE_4295 | hypothetical protein YPMT1.21c |
| 4100 | CP000723.1 | ABR14926.1 JB | 663 [NA] | 220 [AA] | 45856-46518 | YPE_4296 | hypothetical protein YPMT1.20c |
| 4101 | CP000723.1 | ABR14927.1 JB | 435 [NA] | 144 [AA] | 46562-46996 | YPE_4297 | hypothetical protein YPMT1.19c |
| 4102 | CP000723.1 | ABR14928.1 JB | 834 [NA] | 277 [AA] | 46996-47829 | YPE_4298 | hypothetical protein YPMT1.18c |
| 4103 | CP000723.1 | ABR14929.1 JB | 459 [NA] | 152 [AA] | 47813-48271 | YPE_4299 | hypothetical protein YPMT1.17c |
| 4104 | CP000723.1 | ABR14930.1 JB | 474 [NA] | 157 [AA] | 48262-48735 | YPE_4300 | hypothetical protein YPMT1.16c |
| 4105 | CP000723.1 | ABR14931.1 JB | 384 [NA] | 127 [AA] | 48737-49120 | YPE_4301 | hypothetical protein YPMT1.15c |
| 4106 | CP000723.1 | ABR14932.1 JB | 747 [NA] | 248 [AA] | 49195-49941 | YPE_4302 | hypothetical protein YPMT1.14c |
| 4107 | CP000723.1 | ABR14933.1 JB | 318 [NA] | 105 [AA] | 50001-50318 | YPE_4303 | hypothetical protein YPMT1.13c |
| 4108 | CP000723.1 | ABR14934.1 JB | 270 [NA] | 89 [AA] | 50399-50668 | YPE_4304 | hypothetical protein YPMT1.12c |
| 4109 | CP000723.1 | ABR14935.1 JB | 4578 [NA] | 1525 [AA] | 50676-55253 | YPE_4305 | putative membrane protein |
| 4110 | CP000723.1 | ABR14936.1 JB | 336 [NA] | 111 [AA] | 55295-55630 | YPE_4306 | putative phage tail protein |
| 4111 | CP000723.1 | ABR14937.1 JB | 732 [NA] | 243 [AA] | 55687-56418 | YPE_4307 | putative phage tail protein |
| 4112 | CP000723.1 | ABR14938.1 JB | 798 [NA] | 265 [AA] | 56411-57208 | YPE_4308 | putative phage tail protein |
| 4113 | CP000723.1 | ABR14939.1 JB | 588 [NA] | 195 [AA] | 57196-57783 | YPE_4309 | putative phage tail protein |
| 4114 | CP000723.1 | ABR14940.1 JB | 4638 [NA] | 1545 [AA] | 57799-62436 | YPE_4310 | putative phage tail protein |
| 4115 | CP000723.1 | ABR14941.1 JB | 618 [NA] | 205 [AA] | 62454-63071 | YPE_4311 | hypothetical protein YPMT1.05c |
| 4116 | CP000723.1 | ABR14942.1 JB | 2889 [NA] | 962 [AA] | 63152-66040 | YPE_4312 | putative phage tail protein |
| 4117 | CP000723.1 | ABR14943.1 JB | 213 [NA] | 70 [AA] | 66037-66249 | YPE_4313 | hypothetical protein YPMT1.3Ac |
| 4118 | CP000723.1 | ABR14944.1 JB | 609 [NA] | 202 [AA] | 66342-66950 | YPE_4314 | hypothetical protein YPMT1.03c |
| 4119 | CP000723.1 | ABR14945.1 JB | 783 [NA] | 260 [AA] | 67084-67866 | YPE_4315 | putative transposase |
| 4120 | CP000723.1 | ABR14946.1 JB | 1023 [NA] | 340 [AA] | 67863-68885 | YPE_4316 | putative transposase |
| 4121 | CP000723.1 | ABR14947.1 JB | 1236 [NA] | 411 [AA] | 72193-73428 | YPE_4317 | putative porphyrin biosynthetic protein |
| 4122 | CP000723.1 | ABR14948.1 JB | 2367 [NA] | 788 [AA] | 73525-75891 | YPE_4318 | putative porphyrin biosynthetic protein |
| 4123 | CP000723.1 | ABR14949.1 JB | 213 [NA] | 70 [AA] | 76001-76213 | YPE_4319 | hypothetical protein YPMT1.86A |
| 4124 | CP000723.1 | ABR14950.1 JB | 387 [NA] | 128 [AA] | 76476-76862 | YPE_4320 | hypothetical protein YPMT1.86c |
| 4125 | CP000723.1 | ABR14951.1 JB | 1179 [NA] | 392 [AA] | 76857-78035 | YPE_4321 | putative integrase |
| 4126 | CP000723.1 | ABR14952.1 JB | 513 [NA] | 170 [AA] | 78720-79232 | YPE_4322 | putative F1 capsule antigen |
| 4127 | CP000723.1 | ABR14953.1 JB | 2502 [NA] | 833 [AA] | 79313-81814 | YPE_4323 | putative F1 capsule anchoring protein |
| 4128 | CP000723.1 | ABR14954.1 JB | 777 [NA] | 258 [AA] | 81839-82615 | YPE_4324 | putative F1 chaperone protein |
| 4129 | CP000723.1 | ABR14955.1 JB | 924 [NA] | 307 [AA] | 82925-83848 | YPE_4325 | putative F1 operon positive regulatory protein |
| 4130 | CP000723.1 | ABR14956.1 JB | 1209 [NA] | 402 [AA] | 84197-85405 | YPE_4326 | putative transposase |
| 4131 | CP000723.1 | ABR14957.1 JB | 1023 [NA] | 340 [AA] | 85874-86896 | YPE_4327 | putative transposase |
| 4132 | CP000723.1 | ABR14958.1 JB | 372 [NA] | 123 [AA] | 87592-87963 | YPE_4330 | hypothetical protein YPMT1.76A |
| 4133 | CP000723.1 | ABR14959.1 JB | 309 [NA] | 102 [AA] | 87878-88186 | YPE_4331 | hypothetical protein YPMT1.76 |
| 4134 | CP000723.1 | ABR14960.1 JB | 471 [NA] | 156 [AA] | 88257-88727 | YPE_4332 | hypothetical protein YPMT1.75c |
| 4135 | CP000723.1 | ABR14961.1 JB | 1599 [NA] | 532 [AA] | 88972-90570 | YPE_4333 | murine toxin |
| 4136 | CP000723.1 | ABR14962.1 JB | 489 [NA] | 162 [AA] | 90813-91301 | YPE_4334 | hypothetical protein YPMT1.73 |
| 4137 | CP000723.1 | ABR14963.1 JB | 276 [NA] | 91 [AA] | 92041-92316 | YPE_4335 | hypothetical protein YPMT1.72c |
| 4138 | CP000723.1 | ABR14964.1 JB | 987 [NA] | 328 [AA] | 92339-93325 | YPE_4336 | hypothetical protein YPMT1.71 |
| 4139 | CP000723.1 | ABR14965.1 JB | 621 [NA] | 206 [AA] | 93346-93966 | YPE_4337 | putative resolvase |
| 4140 | CP000723.1 | ABR14966.1 JB | 327 [NA] | 108 [AA] | 94166-94492 | YPE_4338 | hypothetical protein YPMT1.69 |
| 4141 | CP000723.1 | ABR14967.1 JB | 228 [NA] | 75 [AA] | 94492-94719 | YPE_4339 | hypothetical protein YPMT1.68A |