Genome Explorer: Brevundimonas diminuta IR18 (SEQF4749.1)
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NCBI Annotation for SEQF4749.1
| Genome selected: Brevundimonas diminuta IR18 | |||
| Contigs: | 43 | Bases: | 3161680 bps |
| CDS: | 25 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 48 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 3001 | JAENJM010000029.1 | MBK1977127.1 JB | 2085 [NA] | 694 [AA] | 16386-18470 | JIX58_15365 | S8 family serine peptidase |
| 3002 | JAENJM010000030.1 | MBK1977128.1 JB | 936 [NA] | 311 [AA] | 228-1163 | JIX58_15370 | ribose-phosphate pyrophosphokinase |
| 3003 | JAENJM010000030.1 | MBK1977129.1 JB | 864 [NA] | 287 [AA] | 1375-2238 | JIX58_15375 | outer membrane protein assembly factor BamD |
| 3004 | JAENJM010000030.1 | MBK1977130.1 JB | 1698 [NA] | 565 [AA] | 2333-4030 | JIX58_15380 | DNA repair protein RecN |
| 3005 | JAENJM010000030.1 | MBK1977131.1 JB | 921 [NA] | 306 [AA] | 4213-5133 | JIX58_15385 | cobalamin biosynthesis protein CbiG |
| 3006 | JAENJM010000030.1 | MBK1977132.1 JB | 543 [NA] | 180 [AA] | 5209-5751 | JIX58_15390 | hypothetical protein |
| 3007 | JAENJM010000030.1 | MBK1977133.1 JB | 786 [NA] | 261 [AA] | 5755-6540 | JIX58_15395 | exodeoxyribonuclease III |
| 3008 | JAENJM010000030.1 | MBK1977134.1 JB | 927 [NA] | 308 [AA] | 6649-7575 | JIX58_15400 | hypothetical protein |
| 3009 | JAENJM010000030.1 | MBK1977135.1 JB | 1041 [NA] | 346 [AA] | 7723-8763 | JIX58_15405 | MBL fold metallo-hydrolase |
| 3010 | JAENJM010000030.1 | MBK1977136.1 JB | 774 [NA] | 257 [AA] | 8760-9533 | JIX58_15410 | enoyl-CoA hydratase |
| 3011 | JAENJM010000030.1 | MBK1977137.1 JB | 513 [NA] | 170 [AA] | 9597-10109 | JIX58_15415 | N-acetyltransferase |
| 3012 | JAENJM010000030.1 | MBK1977138.1 JB | 561 [NA] | 186 [AA] | 10158-10718 | JIX58_15420 | DUF1285 domain-containing protein |
| 3013 | JAENJM010000030.1 | MBK1977139.1 JB | 675 [NA] | 224 [AA] | 10715-11389 | JIX58_15425 | CoA pyrophosphatase |
| 3014 | JAENJM010000030.1 | MBK1977140.1 JB | 1209 [NA] | 402 [AA] | 11386-12594 | JIX58_15430 | CCA tRNA nucleotidyltransferase |
| 3015 | JAENJM010000030.1 | MBK1977141.1 JB | 948 [NA] | 315 [AA] | 12575-13522 | JIX58_15435 | endonuclease/exonuclease/phosphatase family protein |
| 3016 | JAENJM010000030.1 | MBK1977142.1 JB | 798 [NA] | 265 [AA] | 13748-14545 | JIX58_15440 | DUF2793 domain-containing protein |
| 3017 | JAENJM010000031.1 | MBK1977143.1 JB | 1517 [NA] | 506 [AA] | <1-1517 | JIX58_15445 | ABC-F family ATP-binding cassette domain-containing protein |
| 3018 | JAENJM010000031.1 | MBK1977144.1 JB | 594 [NA] | 197 [AA] | 1615-2208 | JIX58_15450 | hypothetical protein |
| 3019 | JAENJM010000031.1 | MBK1977145.1 JB | 591 [NA] | 196 [AA] | 2256-2846 | JIX58_15455 | TetR/AcrR family transcriptional regulator |
| 3020 | JAENJM010000031.1 | MBK1977146.1 JB | 339 [NA] | 112 [AA] | 2843-3181 | JIX58_15460 | multidrug efflux SMR transporter |
| 3021 | JAENJM010000031.1 | MBK1977147.1 JB | 480 [NA] | 159 [AA] | 3224-3703 | JIX58_15465 | YcgN family cysteine cluster protein |
| 3022 | JAENJM010000031.1 | MBK1977148.1 JB | 2412 [NA] | 803 [AA] | 3736-6147 | JIX58_15470 | PAS domain-containing protein |
| 3023 | JAENJM010000031.1 | MBK1977149.1 JB | 456 [NA] | 151 [AA] | 6269-6724 | JIX58_15475 | hypothetical protein |
| 3024 | JAENJM010000031.1 | MBK1977150.1 JB | 1125 [NA] | 374 [AA] | 6744-7868 | JIX58_15480 | DNA-packaging protein |
| 3025 | JAENJM010000031.1 | MBK1977151.1 JB | 1179 [NA] | 392 [AA] | 8029-9207 | JIX58_15485 | phage portal protein |
| 3026 | JAENJM010000031.1 | MBK1977152.1 JB | 225 [NA] | 74 [AA] | 9207-9431 | JIX58_15490 | hypothetical protein |
| 3027 | JAENJM010000031.1 | MBK1977153.1 JB | 435 [NA] | 144 [AA] | 9576-10010 | JIX58_15495 | HK97 family phage prohead protease |
| 3028 | JAENJM010000031.1 | MBK1977154.1 JB | 531 [NA] | 176 [AA] | 10015-10545 | JIX58_15500 | shikimate kinase |
| 3029 | JAENJM010000031.1 | MBK1977155.1 JB | 432 [NA] | 143 [AA] | 10549-10980 | JIX58_15505 | hypothetical protein |
| 3030 | JAENJM010000031.1 | MBK1977156.1 JB | 1242 [NA] | 413 [AA] | 11108-12349 | JIX58_15510 | phage major capsid protein |
| 3031 | JAENJM010000031.1 | MBK1977157.1 JB | 267 [NA] | 88 [AA] | 12566-12832 | JIX58_15515 | phage gp6-like head-tail connector protein |
| 3032 | JAENJM010000031.1 | MBK1977158.1 JB | 303 [NA] | 100 [AA] | 12844-13146 | JIX58_15520 | head-tail adaptor protein |
| 3033 | JAENJM010000031.1 | MBK1977159.1 JB | 408 [NA] | 135 [AA] | 13143-13550 | JIX58_15525 | DUF3168 domain-containing protein |
| 3034 | JAENJM010000032.1 | MBK1977160.1 JB | 246 [NA] | 81 [AA] | 66-311 | JIX58_15530 | hypothetical protein |
| 3035 | JAENJM010000032.1 | MBK1977161.1 JB | 1119 [NA] | 372 [AA] | 308-1426 | JIX58_15535 | DUF2336 domain-containing protein |
| 3036 | JAENJM010000032.1 | MBK1977162.1 JB | 423 [NA] | 140 [AA] | 1511-1933 | JIX58_15540 | MucR family transcriptional regulator |
| 3037 | JAENJM010000032.1 | MBK1977163.1 JB | 1215 [NA] | 404 [AA] | 2098-3312 | JIX58_15545 | DUF2336 domain-containing protein |
| 3038 | JAENJM010000032.1 | MBK1977164.1 JB | 993 [NA] | 330 [AA] | 3365-4357 | JIX58_15550 | cysteine synthase A |
| 3039 | JAENJM010000032.1 | MBK1977165.1 JB | 681 [NA] | 226 [AA] | 4486-5166 | JIX58_15555 | DUF799 family lipoprotein |
| 3040 | JAENJM010000032.1 | MBK1977166.1 JB | 369 [NA] | 122 [AA] | 5163-5531 | JIX58_15560 | DUF4810 domain-containing protein |
| 3041 | JAENJM010000032.1 | MBK1977167.1 JB | 318 [NA] | 105 [AA] | 5528-5845 | JIX58_15565 | hypothetical protein |
| 3042 | JAENJM010000032.1 | MBK1977168.1 JB | 900 [NA] | 299 [AA] | 5842-6741 | JIX58_15570 | hypothetical protein |
| 3043 | JAENJM010000032.1 | MBK1977169.1 JB | 1443 [NA] | 480 [AA] | 6944-8386 | JIX58_15575 | aldehyde dehydrogenase family protein |
| 3044 | JAENJM010000032.1 | MBK1977170.1 JB | 732 [NA] | 243 [AA] | 8394-9125 | JIX58_15580 | hydroxyacylglutathione hydrolase |
| 3045 | JAENJM010000032.1 | MBK1977171.1 JB | 771 [NA] | 256 [AA] | 9229-9999 | JIX58_15585 | methyltransferase domain-containing protein |
| 3046 | JAENJM010000032.1 | MBK1977172.1 JB | 495 [NA] | 164 [AA] | 10010-10504 | JIX58_15590 | histidine phosphatase family protein |
| 3047 | JAENJM010000032.1 | MBK1977173.1 JB | 354 [NA] | 117 [AA] | 10501-10854 | JIX58_15595 | DUF952 domain-containing protein |
| 3048 | JAENJM010000032.1 | MBK1977174.1 JB | 1038 [NA] | 345 [AA] | 10857-11894 | JIX58_15600 | quinone-dependent dihydroorotate dehydrogenase |
| 3049 | JAENJM010000032.1 | MBK1977175.1 JB | 1417 [NA] | 472 [AA] | 11959->13375 | JIX58_15605 | hybrid sensor histidine kinase/response regulator |
| 3050 | JAENJM010000033.1 | MBK1977176.1 JB | 207 [NA] | 69 [AA] | <1-207 | JIX58_15610 | hypothetical protein |
| 3051 | JAENJM010000033.1 | MBK1977177.1 JB | 1320 [NA] | 439 [AA] | 204-1523 | JIX58_15615 | FliI/YscN family ATPase |
| 3052 | JAENJM010000033.1 | MBK1977178.1 JB | 612 [NA] | 203 [AA] | 1520-2131 | JIX58_15620 | hypothetical protein |
| 3053 | JAENJM010000033.1 | MBK1977179.1 JB | 537 [NA] | 178 [AA] | 2128-2664 | JIX58_15625 | hypothetical protein |
| 3054 | JAENJM010000033.1 | MBK1977180.1 JB | 723 [NA] | 240 [AA] | 2661-3383 | JIX58_15630 | type III secretion inner membrane ring lipoprotein SctJ |
| 3055 | JAENJM010000033.1 | MBK1977181.1 JB | 399 [NA] | 132 [AA] | 3395-3793 | JIX58_15635 | hypothetical protein |
| 3056 | JAENJM010000033.1 | MBK1977182.1 JB | 309 [NA] | 102 [AA] | 3820-4128 | JIX58_15640 | hypothetical protein |
| 3057 | JAENJM010000033.1 | MBK1977183.1 JB | 1158 [NA] | 385 [AA] | 4153-5310 | JIX58_15645 | hypothetical protein |
| 3058 | JAENJM010000033.1 | MBK1977184.1 JB | 1920 [NA] | 639 [AA] | 5317-7236 | JIX58_15650 | type III secretion system outer membrane ring subunit SctC |
| 3059 | JAENJM010000034.1 | MBK1977185.1 JB | 1122 [NA] | 373 [AA] | 145-1266 | JIX58_15655 | ABC transporter permease |
| 3060 | JAENJM010000034.1 | MBK1977186.1 JB | 1164 [NA] | 387 [AA] | 1263-2426 | JIX58_15660 | ABC transporter permease |
| 3061 | JAENJM010000034.1 | MBK1977187.1 JB | 1053 [NA] | 350 [AA] | 2423-3475 | JIX58_15665 | efflux RND transporter periplasmic adaptor subunit |
| 3062 | JAENJM010000034.1 | MBK1977188.1 JB | 1416 [NA] | 471 [AA] | 3472-4887 | JIX58_15670 | TolC family protein |
| 3063 | JAENJM010000034.1 | MBK1977189.1 JB | 642 [NA] | 213 [AA] | 4954-5595 | JIX58_15675 | TetR/AcrR family transcriptional regulator |
| 3064 | JAENJM010000034.1 | MBK1977190.1 JB | 520 [NA] | 173 [AA] | 5814->6333 | JIX58_15680 | IS481 family transposase |
| 3065 | JAENJM010000035.1 | MBK1977191.1 JB | 329 [NA] | 110 [AA] | <1-329 | JIX58_15685 | hypothetical protein |
| 3066 | JAENJM010000035.1 | MBK1977192.1 JB | 1413 [NA] | 470 [AA] | 458-1870 | JIX58_15690 | DUF4139 domain-containing protein |
| 3067 | JAENJM010000035.1 | MBK1977193.1 JB | 1608 [NA] | 535 [AA] | 1875-3482 | JIX58_15695 | DUF4139 domain-containing protein |
| 3068 | JAENJM010000035.1 | MBK1977194.1 JB | 606 [NA] | 201 [AA] | 3649-4254 | JIX58_15700 | aminoacyl-tRNA hydrolase |
| 3069 | JAENJM010000035.1 | MBK1977195.1 JB | 615 [NA] | 204 [AA] | 4382-4996 | JIX58_15705 | 50S ribosomal protein L25/general stress protein Ctc |
| 3070 | JAENJM010000035.1 | MBK1977196.1 JB | 948 [NA] | 315 [AA] | 5147->6095 | JIX58_15710 | hypothetical protein |
| 3071 | JAENJM010000037.1 | MBK1977197.1 JB | 720 [NA] | 239 [AA] | 625-1344 | JIX58_15745 | hypothetical protein |
| 3072 | JAENJM010000037.1 | MBK1977198.1 JB | 611 [NA] | 203 [AA] | 1505->2115 | JIX58_15750 | LysR family transcriptional regulator |
| 3073 | JAENJM010000037.1 | MBK1977199.1 JB | 1164 [NA] | 387 [AA] | <2212-3375 | JIX58_15755 | tyrosine-type recombinase/integrase |
| 3074 | JAENJM010000037.1 | MBK1977200.1 JB | 945 [NA] | 314 [AA] | 3372-4316 | JIX58_15760 | tyrosine-type recombinase/integrase |
| 3075 | JAENJM010000037.1 | MBK1977201.1 JB | 993 [NA] | 330 [AA] | 4313-5305 | JIX58_15765 | tyrosine-type recombinase/integrase |
| 3076 | JAENJM010000038.1 | MBK1977202.1 JB | 870 [NA] | 289 [AA] | 229-1098 | JIX58_15770 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
| 3077 | JAENJM010000038.1 | MBK1977203.1 JB | 714 [NA] | 237 [AA] | 1095-1808 | JIX58_15775 | pyrimidine 5'-nucleotidase |
| 3078 | JAENJM010000038.1 | MBK1977204.1 JB | 930 [NA] | 309 [AA] | 1805-2734 | JIX58_15780 | acetylglutamate kinase |
| 3079 | JAENJM010000038.1 | MBK1977205.1 JB | 2205 [NA] | 734 [AA] | 2871-5075 | JIX58_15785 | AGE family epimerase/isomerase |
| 3080 | JAENJM010000038.1 | MBK1977206.1 JB | 134 [NA] | 44 [AA] | 5237->5370 | JIX58_15790 | cell envelope biogenesis protein OmpA |
| 3081 | JAENJM010000039.1 | MBK1977207.1 JB | 321 [NA] | 106 [AA] | <1-321 | JIX58_15795 | ABC transporter ATP-binding protein |
| 3082 | JAENJM010000039.1 | MBK1977208.1 JB | 1545 [NA] | 514 [AA] | 508-2052 | JIX58_15800 | peptidase S10 |
| 3083 | JAENJM010000039.1 | MBK1977209.1 JB | 996 [NA] | 331 [AA] | 2755-3750 | JIX58_15805 | ABC transporter substrate-binding protein |
| 3084 | JAENJM010000039.1 | MBK1977210.1 JB | 842 [NA] | 281 [AA] | 3815->4656 | JIX58_15810 | hypothetical protein |
| 3085 | JAENJM010000040.1 | MBK1977211.1 JB | 1504 [NA] | 501 [AA] | <1-1504 | JIX58_15815 | oleate hydratase |
| 3086 | JAENJM010000040.1 | MBK1977212.1 JB | 864 [NA] | 287 [AA] | 1549-2412 | JIX58_15820 | 3-hydroxyacyl-CoA dehydrogenase |
| 3087 | JAENJM010000040.1 | MBK1977213.1 JB | 480 [NA] | 159 [AA] | 2428-2907 | JIX58_15825 | acyl-CoA thioesterase |
| 3088 | JAENJM010000040.1 | MBK1977214.1 JB | 582 [NA] | 193 [AA] | 3752-4333 | JIX58_15835 | hypothetical protein |
| 3089 | JAENJM010000041.1 | MBK1977215.1 JB | 191 [NA] | 64 [AA] | <1-191 | JIX58_15840 | DUF2163 domain-containing protein |
| 3090 | JAENJM010000041.1 | MBK1977216.1 JB | 612 [NA] | 203 [AA] | 195-806 | JIX58_15845 | DUF2460 domain-containing protein |
| 3091 | JAENJM010000041.1 | MBK1977217.1 JB | 699 [NA] | 232 [AA] | 970-1668 | JIX58_15850 | DUF805 domain-containing protein |
| 3092 | JAENJM010000041.1 | MBK1977218.1 JB | 186 [NA] | 61 [AA] | 2003-2188 | JIX58_15860 | phage tail assembly chaperone |
| 3093 | JAENJM010000041.1 | MBK1977219.1 JB | 291 [NA] | 96 [AA] | 2188-2478 | JIX58_15865 | gene transfer agent family protein |
| 3094 | JAENJM010000041.1 | MBK1977220.1 JB | 411 [NA] | 136 [AA] | 2478-2888 | JIX58_15870 | phage major tail protein, TP901-1 family |
| 3095 | JAENJM010000042.1 | MBK1977221.1 JB | 2185 [NA] | 728 [AA] | <1->2186 | JIX58_15875 | glycoside hydrolase/phage tail family protein |
| 3096 | JAENJM010000043.1 | MBK1977222.1 JB | 1092 [NA] | 364 [AA] | <1-1092 | JIX58_15880 | hypothetical protein |
| 3097 | JAENJM010000043.1 | MBK1977223.1 JB | 381 [NA] | 126 [AA] | 1104-1484 | JIX58_15885 | peptidase P60 |