Genome Explorer: Pseudomonas oleovorans RS1 (SEQF9901.1)
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PROKKA Annotation for SEQF9901.1
| Genome selected: Pseudomonas oleovorans RS1 | |||
| Contigs: | 118 | Bases: | 4784556 bps |
| CDS: | 4596 | rRNA: | 2 |
| tmRNA: | 1 | tRNA: | 62 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 4501 | SEQF9901.1_FNZC01000093.1 | SEQF9901.1_04768 JB | 1326 [NA] | 441 [AA] | 4583-5908 | hypothetical protein | |
| 4502 | SEQF9901.1_FNZC01000093.1 | SEQF9901.1_04769 JB | 1008 [NA] | 335 [AA] | 6444-7451 | yejK_2 | Nucleoid-associated protein YejK |
| 4503 | SEQF9901.1_FNZC01000093.1 | SEQF9901.1_04770 JB | 321 [NA] | 106 [AA] | 7766-8086 | hypothetical protein | |
| 4504 | SEQF9901.1_FNZC01000093.1 | SEQF9901.1_04771 JB | 1080 [NA] | 359 [AA] | 8089-9168 | virS_2 | HTH-type transcriptional regulator VirS |
| 4505 | SEQF9901.1_FNZC01000094.1 | SEQF9901.1_04773 JB | 585 [NA] | 194 [AA] | 252-836 | hypothetical protein | |
| 4506 | SEQF9901.1_FNZC01000094.1 | SEQF9901.1_04774 JB | 399 [NA] | 132 [AA] | 882-1280 | hypothetical protein | |
| 4507 | SEQF9901.1_FNZC01000094.1 | SEQF9901.1_04775 JB | 681 [NA] | 226 [AA] | 1461-2141 | hypothetical protein | |
| 4508 | SEQF9901.1_FNZC01000094.1 | SEQF9901.1_04776 JB | 1947 [NA] | 648 [AA] | 2154-4100 | hypothetical protein | |
| 4509 | SEQF9901.1_FNZC01000094.1 | SEQF9901.1_04777 JB | 342 [NA] | 113 [AA] | 4194-4535 | hypothetical protein | |
| 4510 | SEQF9901.1_FNZC01000094.1 | SEQF9901.1_04778 JB | 1038 [NA] | 345 [AA] | 4687-5724 | hypothetical protein | |
| 4511 | SEQF9901.1_FNZC01000094.1 | SEQF9901.1_04779 JB | 3270 [NA] | 1089 [AA] | 5853-9122 | hypothetical protein | |
| 4512 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04780 JB | 252 [NA] | 83 [AA] | 191-442 | hypothetical protein | |
| 4513 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04781 JB | 804 [NA] | 267 [AA] | 432-1235 | hypothetical protein | |
| 4514 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04782 JB | 1059 [NA] | 352 [AA] | 1405-2463 | aroF_2 | Phospho-2-dehydro-3-deoxyheptonate aldolase%2C Tyr-sensitive |
| 4515 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04783 JB | 90 [NA] | 29 [AA] | 2508-2597 | hypothetical protein | |
| 4516 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04785 JB | 132 [NA] | 43 [AA] | 2729-2860 | hypothetical protein | |
| 4517 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04786 JB | 825 [NA] | 274 [AA] | 2980-3804 | ttcA | tRNA-cytidine(32) 2-sulfurtransferase |
| 4518 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04787 JB | 594 [NA] | 197 [AA] | 3905-4498 | hypothetical protein | |
| 4519 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04788 JB | 600 [NA] | 199 [AA] | 4665-5264 | yohC | Inner membrane protein YohC |
| 4520 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04789 JB | 495 [NA] | 164 [AA] | 5377-5871 | sprT | Protein SprT |
| 4521 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04790 JB | 1182 [NA] | 393 [AA] | 5983-7164 | smtB_2 | Succinyl-CoA--L-malate CoA-transferase beta subunit |
| 4522 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04791 JB | 450 [NA] | 149 [AA] | 7245-7694 | Long-chain-fatty-acid--CoA ligase FadD15 | |
| 4523 | SEQF9901.1_FNZC01000095.1 | SEQF9901.1_04792 JB | 279 [NA] | 92 [AA] | 8663-8941 | hypothetical protein | |
| 4524 | SEQF9901.1_FNZC01000096.1 | SEQF9901.1_04793 JB | 120 [NA] | 39 [AA] | 79-198 | hypothetical protein | |
| 4525 | SEQF9901.1_FNZC01000096.1 | SEQF9901.1_04794 JB | 519 [NA] | 172 [AA] | 404-922 | pagL_2 | Lipid A deacylase PagL |
| 4526 | SEQF9901.1_FNZC01000096.1 | SEQF9901.1_04795 JB | 1431 [NA] | 476 [AA] | 994-2424 | ttgF | Toluene efflux pump outer membrane protein TtgF |
| 4527 | SEQF9901.1_FNZC01000096.1 | SEQF9901.1_04796 JB | 3141 [NA] | 1046 [AA] | 2421-5561 | ttgE | Toluene efflux pump membrane transporter TtgE |
| 4528 | SEQF9901.1_FNZC01000096.1 | SEQF9901.1_04797 JB | 1152 [NA] | 383 [AA] | 5576-6727 | srpA | Solvent efflux pump periplasmic linker SrpA |
| 4529 | SEQF9901.1_FNZC01000096.1 | SEQF9901.1_04798 JB | 711 [NA] | 236 [AA] | 7014-7724 | ttgV | HTH-type transcriptional regulator TtgV |
| 4530 | SEQF9901.1_FNZC01000096.1 | SEQF9901.1_04799 JB | 642 [NA] | 213 [AA] | 7736-8377 | srpR | HTH-type transcriptional regulator SrpR |
| 4531 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00040 JB | 951 [NA] | 316 [AA] | 15-965 | ISL3 family transposase ISPsp2 | |
| 4532 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00041 JB | 771 [NA] | 256 [AA] | 1448-2218 | ttrB | Tetrathionate reductase subunit B |
| 4533 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00042 JB | 1038 [NA] | 345 [AA] | 2229-3266 | ttrC | Tetrathionate reductase subunit C |
| 4534 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00043 JB | 3114 [NA] | 1037 [AA] | 3282-6395 | ttrA | Tetrathionate reductase subunit A |
| 4535 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00044 JB | 327 [NA] | 108 [AA] | 6565-6891 | bigR_1 | Biofilm growth-associated repressor |
| 4536 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00045 JB | 435 [NA] | 144 [AA] | 6888-7322 | hypothetical protein | |
| 4537 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00046 JB | 417 [NA] | 138 [AA] | 7324-7740 | hypothetical protein | |
| 4538 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00047 JB | 189 [NA] | 62 [AA] | 7757-7945 | hypothetical protein | |
| 4539 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00048 JB | 438 [NA] | 145 [AA] | 7973-8410 | hypothetical protein | |
| 4540 | SEQF9901.1_FNZC01000097.1 | SEQF9901.1_00049 JB | 141 [NA] | 46 [AA] | 8392-8532 | hypothetical protein | |
| 4541 | SEQF9901.1_FNZC01000098.1 | SEQF9901.1_03536 JB | 390 [NA] | 129 [AA] | 294-683 | exoA_1 | Exodeoxyribonuclease |
| 4542 | SEQF9901.1_FNZC01000098.1 | SEQF9901.1_03537 JB | 642 [NA] | 213 [AA] | 764-1405 | pyrE | Orotate phosphoribosyltransferase |
| 4543 | SEQF9901.1_FNZC01000098.1 | SEQF9901.1_03538 JB | 603 [NA] | 200 [AA] | 1426-2028 | hypothetical protein | |
| 4544 | SEQF9901.1_FNZC01000098.1 | SEQF9901.1_03539 JB | 906 [NA] | 301 [AA] | 2187-3092 | argB | Acetylglutamate kinase |
| 4545 | SEQF9901.1_FNZC01000098.1 | SEQF9901.1_03540 JB | 2592 [NA] | 863 [AA] | 3117-5708 | glmM_1 | Phosphoglucosamine mutase |
| 4546 | SEQF9901.1_FNZC01000098.1 | SEQF9901.1_03541 JB | 456 [NA] | 151 [AA] | 5747-6202 | dut | Deoxyuridine 5-triphosphate nucleotidohydrolase |
| 4547 | SEQF9901.1_FNZC01000098.1 | SEQF9901.1_03542 JB | 1209 [NA] | 402 [AA] | 6205-7413 | coaBC | Coenzyme A biosynthesis bifunctional protein CoaBC |
| 4548 | SEQF9901.1_FNZC01000099.1 | SEQF9901.1_00033 JB | 546 [NA] | 181 [AA] | 620-1165 | IS30 family transposase ISUnCu4 | |
| 4549 | SEQF9901.1_FNZC01000099.1 | SEQF9901.1_00034 JB | 240 [NA] | 79 [AA] | 1243-1482 | IS30 family transposase ISPsp7 | |
| 4550 | SEQF9901.1_FNZC01000099.1 | SEQF9901.1_00035 JB | 1668 [NA] | 555 [AA] | 1712-3379 | hypothetical protein | |
| 4551 | SEQF9901.1_FNZC01000099.1 | SEQF9901.1_00036 JB | 765 [NA] | 254 [AA] | 3696-4460 | hypothetical protein | |
| 4552 | SEQF9901.1_FNZC01000099.1 | SEQF9901.1_00037 JB | 570 [NA] | 189 [AA] | 4536-5105 | hypothetical protein | |
| 4553 | SEQF9901.1_FNZC01000099.1 | SEQF9901.1_00038 JB | 603 [NA] | 200 [AA] | 5210-5812 | hypothetical protein | |
| 4554 | SEQF9901.1_FNZC01000099.1 | SEQF9901.1_00039 JB | 843 [NA] | 280 [AA] | 5886-6728 | hypothetical protein | |
| 4555 | SEQF9901.1_FNZC01000100.1 | SEQF9901.1_00026 JB | 174 [NA] | 57 [AA] | 97-270 | hypothetical protein | |
| 4556 | SEQF9901.1_FNZC01000100.1 | SEQF9901.1_00028 JB | 882 [NA] | 293 [AA] | 350-1231 | cmpR_1 | HTH-type transcriptional activator CmpR |
| 4557 | SEQF9901.1_FNZC01000100.1 | SEQF9901.1_00029 JB | 1017 [NA] | 338 [AA] | 1357-2373 | ilvC | Ketol-acid reductoisomerase (NADP(+)) |
| 4558 | SEQF9901.1_FNZC01000100.1 | SEQF9901.1_00030 JB | 933 [NA] | 310 [AA] | 2404-3336 | hypothetical protein | |
| 4559 | SEQF9901.1_FNZC01000100.1 | SEQF9901.1_00031 JB | 1011 [NA] | 336 [AA] | 3403-4413 | msrP | Protein-methionine-sulfoxide reductase catalytic subunit MsrP |
| 4560 | SEQF9901.1_FNZC01000100.1 | SEQF9901.1_00032 JB | 627 [NA] | 208 [AA] | 4413-5039 | msrQ | Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ |
| 4561 | SEQF9901.1_FNZC01000101.1 | SEQF9901.1_00019 JB | 1035 [NA] | 344 [AA] | 273-1307 | hypothetical protein | |
| 4562 | SEQF9901.1_FNZC01000101.1 | SEQF9901.1_00020 JB | 369 [NA] | 122 [AA] | 1426-1794 | hypothetical protein | |
| 4563 | SEQF9901.1_FNZC01000101.1 | SEQF9901.1_00021 JB | 1146 [NA] | 381 [AA] | 1899-3044 | xerC_1 | Tyrosine recombinase XerC |
| 4564 | SEQF9901.1_FNZC01000101.1 | SEQF9901.1_00022 JB | 726 [NA] | 241 [AA] | 3216-3941 | hypothetical protein | |
| 4565 | SEQF9901.1_FNZC01000101.1 | SEQF9901.1_00023 JB | 273 [NA] | 90 [AA] | 3997-4269 | hypothetical protein | |
| 4566 | SEQF9901.1_FNZC01000101.1 | SEQF9901.1_00024 JB | 276 [NA] | 91 [AA] | 4269-4544 | hypothetical protein | |
| 4567 | SEQF9901.1_FNZC01000101.1 | SEQF9901.1_00025 JB | 273 [NA] | 90 [AA] | 4544-4816 | hypothetical protein | |
| 4568 | SEQF9901.1_FNZC01000102.1 | SEQF9901.1_02826 JB | 1092 [NA] | 363 [AA] | 301-1392 | anmK | Anhydro-N-acetylmuramic acid kinase |
| 4569 | SEQF9901.1_FNZC01000102.1 | SEQF9901.1_02827 JB | 1428 [NA] | 475 [AA] | 1396-2823 | mepM | Murein DD-endopeptidase MepM |
| 4570 | SEQF9901.1_FNZC01000102.1 | SEQF9901.1_02828 JB | 1200 [NA] | 399 [AA] | 3031-4230 | tyrS | Tyrosine--tRNA ligase |
| 4571 | SEQF9901.1_FNZC01000103.1 | SEQF9901.1_04108 JB | 675 [NA] | 224 [AA] | 161-835 | hypothetical protein | |
| 4572 | SEQF9901.1_FNZC01000103.1 | SEQF9901.1_04109 JB | 1578 [NA] | 525 [AA] | 969-2546 | dppA_3 | Periplasmic dipeptide transport protein |
| 4573 | SEQF9901.1_FNZC01000103.1 | SEQF9901.1_04110 JB | 237 [NA] | 78 [AA] | 2892-3128 | rpmB | 50S ribosomal protein L28 |
| 4574 | SEQF9901.1_FNZC01000103.1 | SEQF9901.1_04111 JB | 156 [NA] | 51 [AA] | 3139-3294 | rpmG | 50S ribosomal protein L33 |
| 4575 | SEQF9901.1_FNZC01000104.1 | SEQF9901.1_00016 JB | 687 [NA] | 228 [AA] | 564-1250 | hypothetical protein | |
| 4576 | SEQF9901.1_FNZC01000104.1 | SEQF9901.1_00017 JB | 750 [NA] | 249 [AA] | 1259-2008 | coaX | Type III pantothenate kinase |
| 4577 | SEQF9901.1_FNZC01000104.1 | SEQF9901.1_00018 JB | 996 [NA] | 331 [AA] | 1998-2993 | birA | Bifunctional ligaserepressor BirA |
| 4578 | SEQF9901.1_FNZC01000105.1 | SEQF9901.1_00009 JB | 927 [NA] | 308 [AA] | 732-1658 | ccoP2_1 | Cbb3-type cytochrome c oxidase subunit CcoP2 |
| 4579 | SEQF9901.1_FNZC01000105.1 | SEQF9901.1_00010 JB | 180 [NA] | 59 [AA] | 1655-1834 | hypothetical protein | |
| 4580 | SEQF9901.1_FNZC01000105.1 | SEQF9901.1_00011 JB | 609 [NA] | 202 [AA] | 1840-2448 | hypothetical protein | |
| 4581 | SEQF9901.1_FNZC01000105.1 | SEQF9901.1_00012 JB | 216 [NA] | 71 [AA] | 2448-2663 | ccoN1_1 | Cbb3-type cytochrome c oxidase subunit CcoN1 |
| 4582 | SEQF9901.1_FNZC01000106.1 | SEQF9901.1_03137 JB | 1377 [NA] | 458 [AA] | 301-1677 | cusS | Sensor histidine kinase CusS |
| 4583 | SEQF9901.1_FNZC01000106.1 | SEQF9901.1_03138 JB | 297 [NA] | 98 [AA] | 1680-1976 | copR_1 | Transcriptional activator protein CopR |
| 4584 | SEQF9901.1_FNZC01000107.1 | SEQF9901.1_00007 JB | 294 [NA] | 97 [AA] | 162-455 | hypothetical protein | |
| 4585 | SEQF9901.1_FNZC01000107.1 | SEQF9901.1_00008 JB | 621 [NA] | 206 [AA] | 590-1210 | hypothetical protein | |
| 4586 | SEQF9901.1_FNZC01000108.1 | SEQF9901.1_04039 JB | 135 [NA] | 44 [AA] | 595-729 | hypothetical protein | |
| 4587 | SEQF9901.1_FNZC01000108.1 | SEQF9901.1_04040 JB | 255 [NA] | 84 [AA] | 760-1014 | hypothetical protein | |
| 4588 | SEQF9901.1_FNZC01000109.1 | SEQF9901.1_00006 JB | 1431 [NA] | 476 [AA] | 158-1588 | IS1182 family transposase ISPa76 | |
| 4589 | SEQF9901.1_FNZC01000110.1 | SEQF9901.1_00117 JB | 1356 [NA] | 451 [AA] | 170-1525 | IS1182 family transposase ISThsp16 | |
| 4590 | SEQF9901.1_FNZC01000111.1 | SEQF9901.1_03822 JB | 270 [NA] | 89 [AA] | 1256-1525 | hypothetical protein | |
| 4591 | SEQF9901.1_FNZC01000112.1 | SEQF9901.1_00005 JB | 1104 [NA] | 367 [AA] | 263-1366 | IS110 family transposase ISPpu11 | |
| 4592 | SEQF9901.1_FNZC01000113.1 | SEQF9901.1_00004 JB | 1047 [NA] | 348 [AA] | 69-1115 | hypothetical protein | |
| 4593 | SEQF9901.1_FNZC01000114.1 | SEQF9901.1_00003 JB | 1065 [NA] | 354 [AA] | 34-1098 | IS4 family transposase ISPa1635 | |
| 4594 | SEQF9901.1_FNZC01000115.1 | SEQF9901.1_00002 JB | 693 [NA] | 230 [AA] | 66-758 | hypothetical protein | |
| 4595 | SEQF9901.1_FNZC01000116.1 | SEQF9901.1_02013 JB | 240 [NA] | 79 [AA] | 438-677 | relB | Antitoxin RelB |
| 4596 | SEQF9901.1_FNZC01000117.1 | SEQF9901.1_00001 JB | 216 [NA] | 71 [AA] | 689-904 | hypothetical protein |