Species: Actinomyces sp._HMT_175
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BMU - Buccal Mucosa
AKE - Keratinized Gingiva
HPA - Hard Palate
TDO - Tongue Dorsum
PTO - Palatine Tonsils
THR - Throat
SAL - Saliva
SUPP - Supra-gingival Plaque
SUBP - Sub-gingival Plaque
ANA - Nasal
STO - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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Notes:
reads equally close to A. sp. HMT 169 and A. sp. HMT 175 were assigned half to each taxon
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
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| Avg | 1.619 | 2.029 | 0.168 | 0.524 | 0.074 | 0.106 | 0.024 | 0.022 | 0.007 | 0.000 |
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| 10thp | 0.003 | 0.025 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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| 90thp | 3.237 | 5.069 | 0.482 | 1.408 | 0.187 | 0.299 | 0.090 | 0.055 | 0.020 | 0.000 |
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| Stdev | 3.268 | 3.680 | 0.420 | 1.070 | 0.146 | 0.160 | 0.048 | 0.049 | 0.018 | 0.000 |
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| Prev | 89.610 | 94.805 | 59.740 | 83.117 | 71.429 | 64.935 | 41.558 | 41.558 | 25.974 | 1.299 |
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Notes:
Reads equally close to A. naeslundii, A. oris, and A. sp. HMT 169, 170, 171, and 175 were divided equally among taxa.
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
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| Avg | 0.446 | 0.536 | 0.030 | 0.119 | 0.026 | 0.027 | 0.015 | 0.014 | 0.003 | 0.000 |
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| 10thp | 0.020 | 0.043 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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| 90thp | 1.087 | 1.184 | 0.065 | 0.235 | 0.056 | 0.062 | 0.023 | 0.019 | 0.009 | 0.000 |
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| Stdev | 0.901 | 0.911 | 0.083 | 0.282 | 0.070 | 0.036 | 0.074 | 0.099 | 0.006 | 0.000 |
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| Prev | 95.946 | 97.297 | 47.973 | 83.108 | 73.649 | 77.703 | 50.676 | 41.216 | 31.757 | 1.399 |
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From: Dewhirst 35x9 data (not published yet)
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Notes:
Reads equally close to HMT 171 and 175 were assigned half to each taxon.
Reads equally close to HMT 175 and 893 were assigned half to each taxon.
Reads equally close to HMT 169 and 175 were assigned half to each taxon.
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | ANA |
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| Avg | 0.327 | 0.368 | 0.048 | 0.064 | 0.033 | 0.009 | 0.004 | 0.002 | 0.001 | 0.005 |
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| 10thp | 0.000 | 0.023 | 0.000 | 0.002 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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| 90thp | 1.082 | 0.846 | 0.128 | 0.187 | 0.108 | 0.018 | 0.009 | 0.005 | 0.003 | 0.000 |
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| Stdev | 0.668 | 0.661 | 0.100 | 0.102 | 0.047 | 0.016 | 0.007 | 0.003 | 0.002 | 0.022 |
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| Prev | 86.486 | 100.000 | 79.070 | 94.286 | 78.571 | 70.000 | 51.515 | 38.710 | 30.000 | 5.000 |
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