HOMD ::species::Aggregatibacter sp._HMT_458

HOME
Taxonomy
Genomes
Proteomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Aggregatibacter sp._HMT_458

Download Options

Full Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter; Aggregatibacter sp._HMT_458

^th

^th

^th

^th

From: Segata et al.(2012) No Data	No Notes

From: Eren et al.(2014) (V1-V3) No Data	No Notes

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to A. sp. HMT 458 and A. sp. HMT 898 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.293	0.401	0.530	0.401	0.074	0.294	0.060	0.185	0.019	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.010	0.000	0.000	0.000	0.000
90^thp	0.984	1.133	1.239	0.772	0.188	0.702	0.126	0.390	0.046	0.000
Stdev	0.426	0.540	1.387	0.873	0.158	0.462	0.120	0.543	0.041	0.001
Prev	68.243	84.459	78.378	89.189	64.189	89.865	66.216	66.892	48.649	0.699

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.475	0.590	0.086	0.214	0.438	0.077	0.101	0.035	0.006	0.000
10^thp	0.000	0.000	0.000	0.000	0.001	0.000	0.000	0.000	0.000	0.000
90^thp	1.317	1.531	0.231	0.487	0.732	0.225	0.053	0.101	0.019	0.000
Stdev	1.272	1.330	0.206	0.384	1.479	0.131	0.492	0.086	0.011	0.000
Prev	68.919	76.471	62.791	85.714	89.286	82.000	63.636	54.839	50.000	0.000