HOMD ::species::Fusobacterium nucleatum

HOME
Taxonomy
Genomes
Proteomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Fusobacterium nucleatum

Download Options

Full Lineage: Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum
Lower rank member(s): [Subspecies:subsp._vincentii] [Subspecies:subsp._polymorphum] [Subspecies:subsp._animalis] [Subspecies:subsp._nucleatum]

^th

^th

^th

^th

From: Segata et al.(2012) No Data	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

combined from subspecies

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	5.873	2.164	0.526	0.487	0.123	0.627	0.725	2.569	0.076	0.001
10^thp	0.322	0.073	0.000	0.021	0.000	0.000	0.000	0.031	0.000	0.000
90^thp	15.894	6.620	1.467	1.016	0.325	1.623	0.998	6.599	0.179	0.000
Stdev	8.545	2.885	1.457	0.764	0.186	0.774	3.292	6.183	0.124	0.004
Prev	97.403	100.000	75.325	90.909	77.922	88.312	72.727	94.805	64.935	1.299

From: Eren et al.(2014) (V3-V5)

Notes:

combined from subspecies

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	10.123	5.112	0.778	0.876	0.234	1.298	0.756	2.895	0.190	0.000
10^thp	1.920	0.499	0.008	0.065	0.015	0.230	0.033	0.080	0.015	0.000
90^thp	20.266	10.701	2.523	2.000	0.495	2.718	1.087	8.351	0.428	0.000
Stdev	6.674	4.239	1.442	1.668	0.443	1.161	2.492	5.818	0.304	0.003
Prev	99.324	100.000	89.865	99.324	93.243	98.649	95.946	97.973	92.568	2.797

From: Dewhirst 35x9 data (not published yet)

Notes:

combined from subspecies

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	11.701	7.782	0.922	1.376	0.881	0.293	0.556	2.436	0.105	0.002
10^thp	0.423	0.607	0.009	0.018	0.033	0.024	0.047	0.004	0.007	0.000
90^thp	26.981	20.081	1.641	3.716	3.682	0.627	1.769	6.377	0.155	0.000
Stdev	12.182	8.615	2.131	2.101	1.377	0.332	0.787	4.645	0.250	0.008
Prev	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	10.000