HOMD ::subspecies::subsp._animalis

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Subspecies: subsp._animalis

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Full Lineage: Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; subsp._animalis

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	1.792	0.442	0.021	0.107	0.050	0.197	0.139	0.732	0.025	0.001
10^thp	0.020	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	3.969	0.922	0.048	0.190	0.134	0.557	0.162	1.219	0.064	0.000
Stdev	3.314	1.099	0.088	0.292	0.150	0.277	0.644	2.719	0.047	0.004
Prev	90.909	74.026	27.273	68.831	44.156	70.130	53.247	77.922	49.351	1.299

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	3.717	1.123	0.033	0.298	0.080	0.424	0.091	0.616	0.046	0.000
10^thp	0.085	0.000	0.000	0.000	0.000	0.025	0.000	0.000	0.000	0.000
90^thp	10.561	3.151	0.089	0.572	0.119	0.992	0.218	0.677	0.121	0.000
Stdev	4.992	1.817	0.168	0.984	0.324	0.601	0.211	2.171	0.080	0.003
Prev	95.270	88.514	22.973	81.757	56.757	91.892	56.757	77.027	54.730	1.399

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 200 and 420 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	4.551	1.034	0.134	0.221	0.114	0.045	0.059	0.158	0.009	0.000
10^thp	0.046	0.018	0.000	0.002	0.000	0.000	0.003	0.000	0.000	0.000
90^thp	11.972	2.549	0.121	0.690	0.299	0.092	0.214	0.308	0.021	0.000
Stdev	7.041	1.758	0.544	0.421	0.278	0.045	0.097	0.374	0.013	0.001
Prev	98.649	97.059	72.093	94.286	85.714	86.000	93.939	87.097	70.000	5.000