HOMD ::species::Streptococcus sp._HMT

Species: Streptococcus sp._HMT_057

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Full Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp._HMT_057

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to S. parasanguinis clade 411, S. peroris, and S. sp. HMT 057 were assigned one third to each taxon

reads equally close to S. parasanguinis clade 411,S. peroris, S. sp. HMT 056, and S. sp. HMT 057 were assigned one fourth to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.002	0.002	0.006	0.017	0.049	0.037	0.062	0.061	0.129	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.003	0.000
90^thp	0.006	0.008	0.017	0.049	0.118	0.070	0.159	0.123	0.366	0.000
Stdev	0.003	0.005	0.015	0.034	0.086	0.119	0.119	0.120	0.233	0.000
Prev	20.779	20.779	29.870	62.338	80.519	51.948	59.740	76.623	89.610	1.299

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to S. australis, S. cristatus clade 578, S. parasanguinis clades 411 and 721, S. sinensis, and S. sp. HMT 057 and 066 were divided equally among taxa.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.049	0.073	0.032	0.163	0.495	0.311	0.476	0.419	0.849	0.001
10^thp	0.000	0.000	0.000	0.015	0.094	0.057	0.107	0.077	0.184	0.000
90^thp	0.119	0.159	0.099	0.416	1.050	0.667	1.016	0.936	1.746	0.003
Stdev	0.089	0.112	0.071	0.203	0.445	0.326	0.395	0.384	0.737	0.004
Prev	79.054	86.486	56.081	99.324	100.000	100.000	99.324	97.973	100.000	16.084

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 057 and 411 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.004	0.008	0.307	0.134	0.202	0.433	0.492	0.390	0.693	0.000
10^thp	0.000	0.000	0.000	0.002	0.012	0.035	0.042	0.023	0.026	0.000
90^thp	0.013	0.022	1.478	0.491	0.557	1.023	1.229	1.078	1.718	0.000
Stdev	0.007	0.014	0.686	0.203	0.237	0.501	0.639	0.583	1.142	0.000
Prev	44.595	55.882	79.070	88.571	100.000	100.000	100.000	96.774	97.500	0.000

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